R package to perform pathway-guided Transcriptome-wide Association Studies [package]
R package to perform multi-trait fine mapping [package]
R package to perform fast and robust variable screening for a number of high-dimension to high-dimension omics integration problems [package]
R package to perform meta-analysis of multiple transcriptomic studies for biomarker detection and categorization by simultaneously considering the biological and statistical significance as well as the concordant pattern across studies. [package]
R package to detect survival associated biomarkers with multiple genomic studies. [package]
R package and Shiny application to perform congruence analysis and functional charaterization for comparison of differential transcriptomic systems across model organisms, including numerous downstream bioinformatic tools for text mining, pathway clustering and topology. [package] [manual] [Shiny application]
R Shiny application to perform comprehensive transcriptomic meta-analysis for seven different biological purposes. [package] [tutorial]
R package that implements 12 major meta-analysis methods for differential expression analysis. [package] [manual] [old version on CRAN]
R package to combine multiple RNA-seq studies by Bayesian hierarchical model for detecting differentially expressed genes and biomarker categorization. [package] [manual]
R package to combine multiple RNA-seq and microarray studies by Bayesian hierarchical model for detecting differentially expressed genes. [package] [manual]