Biology/Chemistry

Adrian Driga, Paul Lu, Jonathan Schaeffer, Duane Szafron, Kevin Charter and Ian Parsons FastLSA: A Fast, Linear-Space, Parallel and Sequential Algorithm for Sequence Alignment, Algorithmica, 45(3), pp. 337-375, 2006. 

Yunjie Xu, Aiko Huckauf, Wolfgang Jaeger, Paul Lu, Jonathan Schaeffer and Christopher Pinchak. CISS-1 Experiment: Ab initio Study of Chiral Interactions, "39th International Union of Pure and Applied Chemistry (IUPAC) Congress and 86th Conference of the Canadian Society for Chemistry, 2003, to appear. 

Bin Li, Steve Buckingham, Jonathan Schaeffer, Andy Spencer and Warren Gallin. Computational Analysis of Voltage-gated Potassium Channels, Intelligent Systems for Molecular Biology (ISMB), abstract page 131, 2003. 

Kevin Charter, Jonathan Schaeffer and Duane Szafron. Sequence Alignment using FastLSA, International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences (METMBS'2000), pp.239-245, 2000. 

David Wishart, Scott Fortin, David Woloschuk, Warren Wong, Tim Rosborough, Gary Van Domselaar, Jonathan Schaeffer and Duane Szafron. A Platform-Independent Graphical User Interface for SEQSEE and XALIGN , Computer Applications in the Biosciences (CABIOS), Vol. 13, No. 5, pp. 561-562, 1997.