Publications
Almubarak, A. and Berry, F.B. (2022) Assessment of growth plate chondrocytes proliferative activity in embryonic endochondral ossificiation via KI67 Immunofluorescence. Methods in Molecular Biology 2579:227-233.
Almubarak, A., Lavy R., Srnic, N, Hu, Y., Maripuri, D.M., Kume, T., Berry, F. B. (2021) Loss of Foxc1 and Foxc2 function in chondroprogenitor cells disrupts endochondral ossification. Journal of Biological Chemistry. 297 (3):101020.
Caddy, J.C., Luoma, L.M. and Berry F.B. (2020) Foxc1 negatively regulates BMP-SMAD activity and Id1 expression during osteoblast differentiation. J. Cell Biochem. Jan 9. doi: 10.1002/jcb.29595.
Luoma, L.M., and Berry, F.B. (2018) Molecular analysis of NPAS3 functional domains and variants. BMC Molecular Biology 19:14 doi:10.1186
Hopkins, A., Coatham, M.L, Berry F.B. (2017) Foxc1 regulates FGFR1 isoform switching to promote invasion following TGFb-induced EMT. Mol Cancer Res. 15:1341-1353. doi: 10.1158/1541-7786.MCR-17-0185.
Hopkins, A., Mirzayans, F., Berry F. (2016). Foxc1 expression in early osteogenic differentiation is regulated by BMP4-SMAD activity. Journal Cellular Biochemistry. 117:1707-17. doi: 10.1002/jcb.25464
Kamaludin, A.A., Smolarchuk, C., Bischof, J.M., Eggert, R., Ren, J., Lee, J.J., Yokota, T., Berry, F.B., Wevrick, R. (2016) Muscle dysfunction caused by loss of Magel2 in a mouse model of Prader-Willi and Schaaf-Yang syndromes. Human Molecular Genetics. 25(17):3798-380
Lavy, R., Allison, W.T., and Berry F.B. (2016) foxc1a genetically interacts with ripply1 to regulate mesp-ba expression and somitogenesis in the zebrafish embryo. bioRxiv, doi:10.1101/041012
Ito, Y.A., Goping, I.S., Berry, F., Walter M.A. (2014) Dysfunction of the stress-responsive FOXC1 transcription factor contributes to the earlier-onset glaucoma observed in Axenfeld-Rieger syndrome patients. Cell Differentiation and Disease. 5: e1069.
Asai-Coakwell, M., March, L., Dai, X.H., Duval, M., Lopez, I., French, C.R,, Famulski, J., De Baere, E., Francis, P.J., Sundaresan, P., Sauvé, Y., Koenekoop, R.K., Berry, F.B., Allison, W.T., Waskiewicz, A.J., Lehmann, O.J. (2013) Contribution of growth differentiation factor 6-dependent cell survival to early-onset retinal dystrophies. Hum Mol Genet. 22:1432-42
Mirzayans, F., Lavy, R., Penner-Chea, J., Berry FB. (2012). Initiation of Early Osteoblast Differentiation Events through the Direct Transcriptional Regulation of Msx2 by FOXC1. PLoS One. 7(11):e49095
Tkocz, D., Crawford, N.T., Buckley, N.E., Berry, F.B., Kennedy, R.D., Gorski, J.J., Harkin, D.P. and Mullan, P.B. (2012). BRCA1 and GATA3 corepress FOXC1 to inhibit the pathogenesis of basal-like breast cancers. Oncogene 31:3667-78.
Strungaru, M.H., Footz, T, Liu, Y., Berry, F.B., Belleau, P., Semina, E., Raymond, V., Walter, M.A. (2011). PITX2 is involved in stress response in cultured human trabecular meshwork cells through regulation of SLC13A3. Investigative Ophthalmology and Vision Science. 52:7625-33.
Ito Y.A,. Footz T.K., Berry F.B., Mirzayans F., Yu M., Khan A.O., Walter M.A. (2009) Severe molecular defects of a novel FOXC1 W152G mutation result in aniridia. Investigative Ophthalmology and Vision Science. 50:3573-9.
Berry, F.B., Skarie, J.M., Mirzayans, F., Fortin, Y., Hudson, T.J., Raymond, V., Link, B.A. and Walter, M.A. (2008). FOXC1 is required for cell viability and resistance to oxidative stress in the eye through the transcriptional regulation of FOXO1A. Human Molecular Genetics 17:490-505.
Huang, L., Chi, J., Berry, F.B., Footz., T.K., Sharp, M.W., and Walter, M.A. (2008) Human p32 is a novel FOXC1-interacting protein that regulates FOXC1 transcriptional activity in ocular cells. Investigative Ophthalmology and Vision Science. 49:5243-9
Berry, F.B., Lines, M.A., Oas, J.M., Footz, T., Underhill, D.A., Gage, P.J. and Walter, M.A. (2006) Functional interactions between FOXC1 and PITX2A underlie sensitivity to FOXC1 gene dosage effects in Axenfeld-Rieger Syndrome and anterior segment dysgenesis. Human Molecular Genetics 15: 905-19.
Berry, F.B., Mirzayans, F., and Walter, M.A. (2006) Regulation of FOXC1 stability and activity by an EGF activated MAP kinase signalling cascade. Journal of Biological Chemistry 281:10098-10104.
Tamimi, Y., Skarie J., Footz, T., Berry, F.B., Link, B.A., and Walter., M.A. (2006) FGF19 is a target for FOXC1 regulation in ciliary body derived cells. Human Molecular Genetics 15:3229-3240.
Berry, F.B., O’Neill, M.A, Coca-Prados, M. and Walter, M.A. (2005) FOXC1 transcriptional regulatory activity is impaired by PBX1 in a Filamin A mediated manner. Molecular and Cellular Biology 25:1415-24.
Berry, F.B., Tamimi, Y., Carle, M.V., Lehmann, O.J. and Walter, M.A. (2005). The establishment of a predictive mutational model of the Forkhead domain through the analyses of FOXC2 missense mutations identified in patients with hereditary lymphedema with distichiasis. Human Molecular Genetics 14: 2619-2627.
Saleem, R.A., Banerjee-Basu, S, Berry, F.B., Baxevanis, A.D. and Walter, M.A. (2003). Structural and functional analyses of disease-causing missense mutations in the forkhead domain of FOXC1. Hum. Mol. Genet. 12:2993-3005.
Berry, F.B., Saleem, R.A. and Walter, M.A. (2002) FOXC1 transcriptional regulation is mediated by N- and C-terminal activation domains and contains a phosphorylated transcriptional inhibitory domain. J. Biol. Chem. 277: 10292-97.
Saleem, R.A., Banerjee-Basu, S, Berry, F.B., Baxevanis, A.D. and Walter, M.A.(2001) Analyses of the Effects That Disease-Causing Missense Mutations Have on the Structure and Function of the Winged-Helix Protein FOXC1. Am. J. Hum. Genet. 68:627-641.
Berry, F.B., Miura, Y., Mihara, K., Kaspar, P. and Tamaoki, T. (2001) Positive and negative regulation of myogenic differentiation of C2C12 cells by isoforms of the multiple-zinc finger homeodomain transcription factor ATBF1. J. Biol. Chem. 276:25057-25065.
Berry, F.B. and Brown, I.R. (1996) CaM I mRNA is localized to apical dendrites during postnatal development of neurons in the rat brain. J.Neurosci. Res. 43:565-575.
Berry, F.B., Prusky, G.T. and Brown, I.R. (1996)Alteration of CaM I mRNA expression in the developing rat superior colliculus following chronic treatment with an NMDA receptor antagonist. Dev. Brain Res. 91:171-180.
Berry, F. and Brown, I.R. (1995) Developmental expression of calmodulin mRNA and protein in regions of the postnatal rat brain. J. Neurosci. Res. 42:613-622.