one-liners
VCFtools
An Introduction To Applied Bioinformatics
RNA-Seq Data Analysis
RNA-seq workflow: gene-level exploratory analysis and differential expression
WGCNA
DAVE TANG'S BLOG
kallisto
DESeq2
RNA-seq analysis in R
RPAN: Rice Pan-genome Browser
Biomedical Data Science
Intensive and comprehensive training workshops
Phylogenetic Comparative Methods
Biopython
Mixed-model QTL detection by linkage analysis
R/QTL