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Tutorials

  • 3DFS to search 3D databases for potential drug molecules matching a pharmacophore

  • Potential mean force (PMF) calculations with AMBER and WHAM

  • APBS to compute protein-protein electrostatic binding free energy

  • COMBINE analysis to derive protein structure-based QSARs

  • UHBD to compute protein-ligand electrostatic binding free energy
Subpages (3): 3DFS 2.0 APBS PMF
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