Link
Niedworok et al., Cell Reports, 2, 1375-1386 (2012)
THF-BABB
Ertürk A et al., Nature Medicine, 18, 166–171 (2012)
THF-DBE (3DISCO)
Becker K et al., PLoS ONE, 7, e33916. (2012)
Ertürk A et al., Nature Protocols, 7, 1983–1995 (2012)
3D immunostaining
Gleave JA et al., PLOS ONE, 8, e72039 (2013)
Renier N et al., Cell, 159, http://dx.doi.org/10.1016/j.cell.2014.07.017 (2014)
Sucrose
Tsai PS et al., Journal of Neuroscience, 29, 14553-14570 (2009)
TDE
Staudt T et al., Microsc. Res. Tech., 70, 1–9 (2007).
Gonzalez-Bellido PT & Wardill TJ,, Cold Spring Harbor Protocols (2012)
Aoyagi Y et al., PLoS ONE, 10, e0116280 (2015)
Costantini I et al., Scientific Reports, 5, 9808 (2015)
Scale/ScaleS
Hama H et al., Nature Neuroscience, 14, 1481–1488 (2011)
Hama H et al., Nature Neuroscience, 18, 1518–1529 (2015)
ClearT/ClearT2
Kuwajima T et al., Development, 140, 1364-1368 (2013)
ClearSee (for plants)
Kurihara D et al., Development, 142, 4168-4179 (2015)
CLARITY/SWITCH
Chung K et al., Nature, 497, 332–337 (2013)
Raju T et al., Nature Protocols, 9, 1682-1697 (2014)
Yang B et al., Cell, 158, 945–958 (2014)
Treweek JB et al., Nature Protocols, 10, 1860–1896 (2015)
Murray E et al., Cell, 163, 1500-1514 (2015)
Expansion Microscopy
Chen F et al., Science, 347, 543-548 (2015)
CUBIC
Susaki EA et al., Cell, 157, 726–739 (2014)
Tainaka K et al., Cell, 159, 991-924 (2014)
Susaki EA et al., Nature Protocols, 10, 1709-1727 (2015)
FocusClear (commercial)
RapiClear (commercial)
Review:
Richardson DS & Lichtman JW, Cell, 162, 246-257 (2015)
Marx V (commentary), Nature Methods, 11, 1209–1214 (2014)