There are several different ways to do same thing. But sometimes there is a need to have a working way to kick start the learning. In this section, I am providing you working protocols for some of the interesting exercises. I hope that they will be useful.
The standard of these protocols meets with the requirement of Biotech undergraduates and for Bioinformatics beginners. These protocols are designed by me based on my personal experience and illustrate one of the possible ways of performing a given exercise. I strongly recommend the users to explore other possibilities that you may think of.
Here, we are concentrating to solve biological problems using freely available computational tools. Again, the software tools and methodologies are not limited to the names given in the protocols. Users are always advised to explore new methods and compare its performance with the existing well established approaches.
I do not endorse any computer software or a methodology.