Publications
Ongoing work and Preprints:
S. Pattabiraman, R. Gabrys and O. Milenkovic, "Coding for Polymer-Based Data Storage", journal submission under review [arXiv 2003.02121].
R. Gabrys, S. Pattabiraman, V. Rana, J. Ribeiro, M. Cheraghchi, V. Guruswami, O. Milenkovic , "AC-DC: Amplification Curve Diagnostics for Covid-19 Group Testing", journal submission under review [arXiv:2011.05223].
R. Gabrys, S. Pattabiraman, and O. Milenkovic, "Reconstructing Mixtures of Coded Strings from Prefix and Suffix Compositions", journal under preparation [arXiv 2110.02352].
Journals:
S. Pattabiraman, and T. Warnow, "Profile Hidden Markov Models are not Identifiable", IEEE/ACM Transactions on Computational Biology, pages 162-172, Jan. - Feb. 2021 [DOI 10.1109/TCBB.2019.2933821].
Conferences:
R.K. Raman and S. Pattabiraman, "Selfish Learning: Leveraging the Greed in Social Learning", in the proceedings of the 2018 IEEE International Conference on Acoustics, Speech, Signal Processing, April 2018 [DOI 10.1109/ICASSP.2018.8462324 ].
S. Pattabiraman, and T. Warnow "Are profile hidden Markov models identifiable?", in the proceedings of the 2018 ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics, 2018[DOI 10.1145/3233547.3233563].
S. Pattabiraman, R. Gabrys and O. Milenkovic, "Reconstruction and Error-Correction Codes for Polymer-Based Data Storage", in the proceedings of the 2019 Information Theory Workshop (ITW) [DOI 10.1109/ITW44776.2019.8989171].
R. Gabrys, S. Pattabiraman, and O. Milenkovic,"Mass Error-Correction Codes for Polymer-Based Data Storage", in the proceedings of the 2020 IEEE International Symposium on Information Theory (ISIT) [DOI 10.1109/ISIT44484.2020.9174404].
A. Agarwal, O. Milenkovic, S. Pattabiraman, and J. Ribeiro, "Group Testing with Runlength Constraints for Topological Molecular Storage", in the proceedings of the 2020 IEEE International Symposium on Information Theory (ISIT) [DOI 10.1109/ISIT44484.2020.9174502].
R. Gabrys, S. Pattabiraman, and O. Milenkovic, "Reconstructing Mixtures of Coded Strings from Prefix and Suffix Compositions", to appear in the proceedings of the 2020 Information Theory Workshop (ITW) [arXiv 2010.11116].
Other Talks:
"Coding for Polymer and DNA Based Storage," EECS Rising Stars 2021.
"Reconstruction and Error-Correction Codes for Polymer-Based Data Storage," 2020 Fall Southeastern Virtual Sectional Meeting.