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In short
Assistant Professor at DTU Compute. Active in the field of Magnetic Resonance Imaging (MRI) image and signal processing, and physics.
Before: postdoc jointly at DTU, EPFL and DRCMR as part of the Marie Curie COFUND Eurotech postdoc programme.
Brain dynamics on the connectome (summer school)
A complete summer school on building the structural connectome with Diffusion MRI and its use in connection with MEG and EEG modalities.
The DisCo Challenge
Check this out!!!! http://hardi.epfl.ch/static/events/2021_challenge/
(https://zenodo.org/record/4572683#.YECSg_4o-Uk )
The miscrostructure of the DiSCo datasets is described at https://doi.org/10.1007/978-3-030-87615-9_14 while their production is described at https://doi.org/10.1016/j.dib.2021.107429.
The data is available here!!!!!! https://data.mendeley.com/datasets/fgf86jdfg6/1
CoBCoM Lectures
Presenting the work on phase correction, supported by the Swiss National Science Foundation and by the EU ERC programme.
You can find the relevant paper here https://doi.org/10.1016/j.neuroimage.2019.116274.
Other interesting talks can be found here.
Organizational activities
Co-organizer of DisCo challenge 2021 (http://hardi.epfl.ch/static/events/2021_challenge/, https://zenodo.org/record/4572683#.YECSg_4o-Uk )
Co-organizer of CDMRI 2020 ( http://cmic.cs.ucl.ac.uk/cdmri20/)
Co-organizer of Super-MUDI challenge (http://cmic.cs.ucl.ac.uk/cdmri20/challenge.html)
Co-organizer of CDMRI 2019 ( http://cmic.cs.ucl.ac.uk/cdmri19/)
Co-organizer of MUDI challenge (http://cmic.cs.ucl.ac.uk/cdmri19/challenge.html)
Talks
Lecture at the Brain Dynamics on the Connectome summer school, October 11 2021 (https://sinergia-connectomics-summerschool-2021.github.io/). Check out the lectures.
Talk at ISMRM 28th Annual meeting & exhibition 2020, (Virtual): Magna Cum Laude for the abstract (960) https://www.ismrm.org/20/program_files/O69.htm and https://www.ismrm.org/about/ampc-faq/#Q17
Speaker at TRABIT Summer School 2019 (http://trabit2019.epfl.ch/speakers/)
Speaker at Lemanic Neuroscience Doctoral School (Lausanne, Switzerland, February 14th, 2019) https://www.unil.ch/ln/home/menuinst/ln-doctoral-school.html
Talk at Dagsthul seminar 18442 (2018). Visualization and processing of Anisotropy in Imaging, Geometry, and Astronomy https://www.dagstuhl.de/en/program/calendar/semhp/?semnr=18442
Talk at Computational Diffusion MRI workshop, MICCAI 2016, Athens (Greece)
Talk at ISMRM 24th Annual meeting & exhibition, Singapore, 2016
Talk at Computational Diffusion MRI workshop, MICCAI 2014, Boston (USA)
Cooperation
Multimodal Microstructure-Informed Connectivity (MMINCARAV) between Inria and EPFL (https://team.inria.fr/empenn/research/mmincarav-inria-epfl/)
Truffet, R., Rafael-Patino, J., Girard, G., Pizzolato, M., Barillot, C., Thiran, J.P & Caruyer, E. (2020). An evolutionary framework for microstructure-sensitive generalized diffusion gradient waveforms. In proceedings of MICCAI 2020, Lima, Peru. https://www.hal.inserm.fr/inserm-02910086/?
Sinergia consortium for Brain Communication Pathways (https://sinergiaconsortium.bitbucket.io/)
Reviewer activity
Check the verified reviews out here
Awards
Magna Cum Laude awarded by the ISMRM Society for the abstract "Axonal diffusivities from two-shell PGSE data" given to Trainee members whose abstracts score in the top 15% within a major subject review category (https://www.ismrm.org/about/ampc-faq/#Q17) year 2022.
Magna Cum Laude awarded by the ISMRM Society for the abstract 960 (https://www.ismrm.org/20/program_files/O69.htm) given to Trainee members whose abstracts score in the top 15% within a major subject review category (https://www.ismrm.org/about/ampc-faq/#Q17) year 2020.
First Place: Macaque Validation Challenge at the 3-D Validation of Tractography with Experimental MRI (3D VoTEM), organized within the IEEE International Symposium on Biomedical Imaging (ISBI 2018), April 4-7, 2018, Washington, D.C. (USA). Team: Gabriel Girard, Erick J. Canales-Rodríguez, Muhamed Barakovic, Mario Ocampo, Jonathan Rafael-Patino, David Romascano, Gaëtan Rensonnet, Marco Pizzolato, Alice Bates, Elda Fischi, Simona Schiavi, Alessandro Daducci, Jean-Philippe Thiran.
First Place (Overall and HCP winner): IronTrack Challenge 2019 organized within the the 22nd International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2019) Conference, 13-17 Oct 2019, Shenzhen, China. Team: Gabriel Girard, Erick J. Canales-Rodríguez, Muhamed Barakovic, Jonathan Rafael-Patino, Thomas Yu, Gaëtan Rensonnet, Simona Schiavi, Alessandro Daducci, Marco Pizzolato, Elda Fischi-Gomez, Jean-Philippe Thiran.
MICCAI Student travel Award 2015: http://www.miccai.org/about-miccai/awards/student-travel-awards/).
Computational Diffusion MRI
MICCAI Workshop, Shenzhen, China, October 2019
Editors: Bonet-Carne, E., Hutter, J., Palombo, M., Pizzolato, M., Sepehrband, F., Zhang, F.
https://www.springer.com/gp/book/9783030528928
MICCAI Workshop, Lima, Peru, October 2020
Editors: Gyori, N., Hutter, J., Nath, V., Palombo, M., Pizzolato, M., Zhang, F.