Publications

2026 (4)

[174] Serial femtosecond crystallography data processing at the global science data hub center at KISTI. Nam KH*, Na SH*. Sci Rep. (2026)

[173] Evaluation of AI-predicted GH11 Xylanase Models against a Previously Unreported Experimental Structure: Implications for Conformational Accuracy and Ligand Binding. Nam KH*. Int. J. Mol. Sci. 27(3), 1370 (2026)

[172] Special Issue “Structural Dynamics of Macromolecules”. Nam KH*. Int. J. Mol. Sci. 27(2), 961 (2026)

[171] Evaluation of AlphaFold3 prediction for post-translational modification, oligomeric assembly, and quenchable metal binding of fluorescent proteins. Nam KH*. J. Mol. Graph. Model. 142, 109169 (2026)

2025 (16)

[170] Structural flexibility of the nicotinamide group of NADH in butanol dehydrogenase YqdH from Fusobacterium nucleatum. Bai X, Nam KH*, Xu Y*. PLOS One 329(2), 145590 (2025)

[169] Enzymatic properties and potential for agro-food byproduct upcycling of xylanase TcrXyn10A expressed in Escherichia coli. Kim KM, Han DG, Kim BS, Kim SR, Nam KH*, Kim J*. Int. J. Biol. Macromol. 329(2), 145590 (2025)

[168] Preliminary Serial Femtosecond Crystallography Studies of Myoglobin from Equine Skeletal Muscle. Park J, Park S, Nam KH*. Crystals 15(10), 905 (2025)

[167] Structure-Based Understanding of Cu2+ Coordination in Fluorescent Proteins for Metal Biosensor Applications—A Review. Nam KH*. Biosensors 15 (10), 675 (2025)

[166] Glucose binding to the gatekeeper region induces the glucose stimulation of β-glucosidase Cba3 from Cellulomonas biazotea. Kim D, Nam KH*, Kim J*. Int. J. Biol. Macromol. 319(4), 145590 (2025)

[165] Dehydration-Induced Space Group Transition Triggers Conformational Changes in Protein Structure. Nam KH*, Crystals 15(8), 674 (2025)

[164] Effect of crystal-to-detector distance shift on data processing in serial crystallography. Nam KH*. PloS one 20(6),e0327019 (2025)

[163] pH-Induced Conformational Change of the Chromophore of the Large Stokes Shift Fluorescent Protein tKeima. Xu Y,  Seo YG, IJ Kim, Nam KH*. Molecules 30 (7), 1623 (2025)

[162] Structural analysis of substrate recognition loop flexibility in D-arabinose dehydrogenase from Candida auris. Dan M,  Jie Z, Xue B, Nam KH*, Xu Y*. Biochem. Biophys. Res. Commun. 755, 151573 (2025)

[161] Data of the crystal structure of xylose isomerase from Streptomyces avermitilis. Nam KH*.  Data Brief. 59, 111414 (2025)

[160] Application of Fixed-Target Microcrystal Delivery Systems for Serial Femtosecond Crystallography at PAL-XFEL. Park J*, Nam KH*. Analytica 6(1), 7 (2025)

[159] Microcrystal Delivery Using a Syringe and Syringe Pump Method for Serial Crystallography. Nam KH*.  Analytica 6(1), 5 (2025).

[158] Effects of Beam Center Position Shifts on Data Processing in Serial Crystallography. Nam KH*, 15(2), 185 (2025).

[157] Molecular Properties of Phosphodiesterase 4 and Its Inhibition by Roflumilast and Cilomilast. Kwak HJ*. Nam KH*. Molecules 30(3), 692 (2025)

[156] Temperature-Dependent Structural Changes of the Active Site and Substrate-Binding Cleft in Hen Egg White Lysozyme. Nam KH*.  Crystals  15(2), 111 (2024)

[155] Impact of Diffraction Data Volume on Data Quality in Serial Crystallography. Nam KH*.  Crystals 15(2), 104 (2025)

2024 (28)

[154] Exploring the reaction dynamics of alanine racemase using serial femtosecond crystallography. Kim J, Park J, Lee K, Chung WK, Nam KH*, Cho Y*. Sci Rep. 14(1):31442 (2024).

[153] Experimental approaches for time-resolved serial femtosecond crystallography at PAL-XFEL. Park J*, Nam KH*. Methods Enzymol. (2024)

[152] Evaluation of AlphaFold3 for the fatty acids docking to human fatty acid-binding proteins. Nam KH*.  J. Mol. Graph. Model. (2024)

[151] Application of Serial Crystallography for Merging Incomplete Macromolecular Crystallography Datasets. Nam KH*.  Crystals 14(12):1012 (2024)

[144] Data of fixed-target pink-beam serial synchrotron crystallography at the Pohang Light Source II. Kim Y, Nam KH*. Data Brief. (2024)

[143] Temperature-Dependent Structural Changes in Xylanase II from Trichoderma longibrachiatum. Nam KH*. Carbohydr. Res. 541, 109173 (2024)

[142] Structural analysis of the large Stokes shift red fluorescent protein tKeima. Nam KH*, Xu Y. Molecules 29(11), 2579 (2024)

[141] Structural Analysis of Xylose Isomerase from Streptomyces avermitilis. Nam KH*. Crystals. 14(5), 446 (2024)

[140] Recognition of a Single β-D-Xylopyranose Molecule by Xylanase GH11 from Thermoanaerobacterium saccharolyticum. Nam KH*. Crystals. 14(5), 402 (2024)

[139] pH-Induced structural changes in Xylanase GH11 from Thermoanaerobacterium saccharolyticum. Nam KH*. F1000Res.13, 242 (2024)

[138] Improving the quality of spontaneously growing HviGH11 crystals by increasing the viscosity using polyethylene glycols. Nam KH*. Crystals. 14(3), 289 (2024)

[137] Comparative Analysis of Room-Temperature Structures Determined by Macromolecular and Serial Crystallography. Nam KH*. Crystals.14(3), 276 (2024)

[136] Recent chemical mixing devices for time-resolved serial femtosecond crystallography. Park J, Nam KH*. TrAC, Trends Anal. Chem. 172, 117554 (2024)

[135] Structural analysis of Tris binding in β-glucosidases. Nam KH*. Biochem. Biophys. Res. Commun. 700, 149608 (2024)

[134] Structural and bioinformatics analysis of single-domain substrate-binding protein from Rhodothermus marinus. Nam KH*. Biochem. Biophys. Rep. 37, 101611 (2024)

[133] Guide to serial synchrotron crystallography. Nam KH*. Curr. Res. Struct. Biol. 7, 100131 (2024)

[132] Exploiting activation and inactivation mechanisms in type I-C CRISPR-Cas3 for genome-editing applications. Hu C, Myers MT, Zhou X, Hou Z, Lozen ML, Nam KH, Zhang Y*, Ke A*. Mol Cell. 84(3), 463-475.e5 (2024) 

[131] Data of radiation damage on selenomethionine-substituted single-domain substrate-binding protein. Nam KH*. Data Brief 53, 110114(2024)

[130] Data of serial synchrotron crystallography of xylanase GH11 from Thermoanaerobacterium saccharolyticum. Nam KH*. Data Brief 52, 110055 (2024)

[129] Data of the subatomic resolution structure of glucose isomerase complexed with xylitol inhibitor. Xu Y, Nam KH*. Data Brief 52, 109916 (2024)

[128] Data of pink-beam serial synchrotron crystallography at the Pohang Light Source II. Kim YS, Nam KH*. Data Brief 52, 109811 (2024)

[127] Structural flexibility of the monomeric red fluorescent protein DsRed. Nam KH*. Crystals 14(1), 62 (2024)

2023 (17)

[126] Structural mechanism of Escherichia coli cyanase. Kim J, Kim Y, Park J, Nam KH*, Cho Y*. Acta Crystallogr D Struct Biol . (2023)

[125] The conformational change of the L3 loop affects the structural changes in the substrate binding pocket entrance of β-glucosidase. Nam KH*. Molecules (2023)

[124] Radiation damage on selenomethionine-substituted single-Domain substrate-binding protein. Nam KH*. Crystals 13(12), 1620 (2023)

[123] Xylitol binding to the M1 site of glucose isomerase induces a conformational change in the substrate binding channel. Xu Y, Nam KH*. Biochem. Biophys. Res. Commun. 682, 21-26 (2023)

[119] AI-based protein models enhance the accuracy of experimentally determined protein crystal structures. Nam KH*. Front. Mol. Biosci.  10, 1208810 (2023)

[118] Real-time monitoring of large-scale crystal growth using batch crystallization for serial crystallography. Nam KH*. J. Cryst. Growth  614, 127219 (2023)

[117] Sample delivery systems for serial femtosecond crystallography at the PAL-XFEL. Park J*, Nam KH*. Photonics. 10(5), 557 (2003) (preprint) 

[116] Fluorescent protein-based metal biosensors. Nam KH*. Chemosensors. 11(4), 216 (2023).

[115] Unique alcohol dehydrogenases involved in algal sugar utilization by marine bacteria. Brott S, Nam KH, Thomas F, Dutschei T, Reisky L, Behrens M, Grimm HC, Michel G, Schweder T, Bornscheuer UT. Appl. Microbiol. Biotechnol. 107, 2363–2384 (2023).

[114] Structural and biochemical analyses of the butanol dehydrogenase from Fusobacterium nucleatum. Bai X†, Lan J†, He S, Bu T, Zhang J, Wang L, Jin X, Mao Y, Guan W, Zhang L, Lu M, Piao H, Jo I, Quan C, Nam KH*, Xu Y*. Int. J. Mol. Sci. 24(3), 2994 (2023).

[113] Radiation damage on thaumatin: A case study of crystals that are larger than the microfocusing X-ray beam. Nam KH*.  Appl. Sci. 13(3), 1876 (2023).

[112] Serial X-ray crystallography II. Nam KH*. Crystals 13(2), 222 (2023).

[111] Structural basis of the inhibition of L-methionine γ-lyase from Fusobacterium nucleatum. Bu T, Lan J, Jo I , Zhang J, Bai X, He S, Jin X, Wang L, Jin Y, Jin X, Zhang L, Piao H, Ha NC, Quan C, Nam KH*, Xu Y*. Int. J. Mol. Sci. 24(2), 1651 (2023).

[110] X-ray-induced heating in the vicinity of the X-ray interaction point. Kim J,* Nam KH*.  Appl. Sci. 13(2), 717 (2023).

2022 (20)

[109] Pink-beam serial synchrotron crystallography at Pohang Light Source II.  Kim Y,* Nam KH*. Crystals 12(11), 1637 (2022).

[108] Regulation of BRCA1 stability through the tandem UBX domains of isoleucyl-tRNA synthetase 1. Chung S, Kang MS, Alimbetov DS, Mun GI, Yunn NO, Kim Y, Kim BG, Wie M, Lee EA, Ra JS, Oh JM, Lee D, Lee K, Kim J, Han SH, Kim KT, Chung WK, Nam KH, Park J, Lee B, Kim S, Zhao W, Ryu SH, Lee YS, Myung K*, Cho Y*. Nat Commun. 13(1):6732 (2022).

[107] Upgraded combined inject-and-transfer system for serial femtosecond crystallography. Lee K, Lee D, Park J, Lee JL, Chung WK*, Cho Y, Nam KH*. Appl. Sci. 12(18), 9125 (2022).

[106] Craspase is a CRISPR RNA-guided, RNA-activated protease.  Hu C, van Beljouw SPB, Nam KH, Schuler G, Ding F, Cui Y, Rodríguez-Molina A, Haagsma AC, Valk M, Pabst M, Brouns SJJ*, Ke A*. Science. 377(6612):1278-1285 (2022).

[105] Radiation damage of polydimethylsiloxane and polyimide by X-ray free-electron laser. Lee K, Lee D, Baek S, Kim J, Park J, Lee SJ, Park S, Kim J, Lee JL, Chung WK, Cho Y, Nam KH*. Appl. Sci. 12(17), 8431 (2022).

[104] Allosteric control of type I-A CRISPR-Cas3 complexes and establishment as effective nucleic acid detection and human genome editing tools. Hu C, Ni D, Nam KH, Majumdar S, McLean J, Stahlberg H, Terns MP, Ke A*. Mol Cell. 82(15):2754-2768.e5 (2022).

[103] Combination of an inject-and-transfer system for serial femtosecond crystallography. Lee K, Kim J, Baek S, Park J, Park  S, Lee JL, Chung WK, Cho Y, Nam KH*. J. Appl. Cryst. 55 (4), 813-822 (2022).

[102] Structural and functional analysis of the pyridoxal phosphate homeostasis protein YggS from Fusobacterium nucleatum. He S,  Chen Y, Wang L, Bai X, Bu T, Zhang J, Lu M, Ha NC, Quan C*, Nam KH*, Xu Y*. Molecules. 27(15), 4781 (2022).

[101] NADH-dependent butanol dehydrogenase from Fusobacterium nucleatum: purification, crystallization, and X-ray crystallographic analysis. Bai X, Lan J, He S, Bu T, Zhang J, Wang L, Quan C, Nam KH, Ha NC* and Xu Y*. Biodesign. 10(2), 29-33 (2022).

[100] Preliminary XFEL data on spontaneously grown endo-1,4-β-xylanase crystals from Hypocrea virens. Nam KH*, Park SH, Park JH. Acta Crystallogr. F Struct Biol Commun. F78, 226-231 (2022).

[99] Molecular dynamics - from macromolecule to small molecules. Nam KH*, Int. J. Mol. Sci. 23(10), 5676 (2022).

[98] Metal-Induced fluorescence quenching of photoconvertible fluorescent protein DendFP. Kim IJ, Xu Y, Nam KH*. Molecules. 27(9), 2922 (2022)

[97] Crystal structure of the domain-swapped dimeric maltodextrin-binding protein MalE from Salmonella enterica. Wang L, Bu T, Bai X,  He S, Zhang J, Jin L, Liu B, Dong Y,Ha NC, Quan C*, Nam KH*, Xu Y*. Acta Crystallogr. D Struct. Biol.  D78, 613-622 (2022).

[96] Crystal structure of human lysozyme complexed with N-acetyl-α-D-glucosamine. Nam KH*. Appl. Sci. 12(9), 4363 (2022).

[95] Hit and indexing rate in serial crystallography: Incomparable statistics. Nam KH*. Front. Mol. Biosci. 9:858815 (2022).

[94] Beef tallow injection matrix for serial crystallography. Nam KH*. Sci. Rep. 12, 694 (2022).

[93] Processing of Multicrystal Diffraction Patterns in Macromolecular Crystallography using Serial Crystallography Programs. Nam KH*. Crystals 12(1), 103 (2022).

[92] Serial X-ray Crystallography. Nam KH*. Crystals 12(1), 99 (2022).

[91] Biochemical and structural analysis of a glucose-tolerant β-glucosidase from the hemicellulose-degrading Thermoanaerobacterium saccharolyticum. Kim IJ, Bornscheuer UT, Nam KH*. Molecules 27(1), 290 (2022).

[90] Glucose Isomerase: Function, Structure, and Application. Nam KH*. Appl. Sci. 12(1), 428 (2022).

2021 (12)

[89] Functional and structural analysis of catabolite control protein C that responds to citrate. Liu W, Chen J, Jin L, Liu ZY, Lu M, Jiang G, Yang Q, Quan C*, Nam KH*, Xu Y*. Sci. Rep. 11, 20285 (2021).

[88] Mechanism for Cas4-assisted directional spacer acquisition in CRISPR-Cas. Hu C, Almendros C, Nam KH, Costa AR, Vink JNA, Haagsma AC, Bagde SR, Brouns SJJ*, Ke A*. Nature 598, 515–520 (2021).

[87] Stable sample delivery in viscous medium via a polyimide-based single-channel microfluidics chip for serial crystallography. Nam KH*, Cho Y.  J. Appl. Cryst. 54, 1081-1087 (2021).

[86] Crystal structure of human brain-type fatty acid binding protein FABP7 complexed with palmitic acid. Nam KH* Acta Crystallogr. D Struct. Biol. D77, 954-965 (2021).

[85] Polyimide mesh-based sample holder with irregular crystal mounting holes for fixed-target serial crystallography. Nam KH*, Kim J, Cho Y. Sci. Rep.  11, 13115  (2021). 

[84] Approach of Serial Crystallography II. Nam KH*. Crystals 11(6), 655 (2021).

[83] Room Temperature Structure of Xylitol-bound Glucose Isomerase by Serial Crystallography: Xylitol Binding in the M1 Site Induces Release of Metal Bound in the M2 Site. KH Nam*. Int. J. Mol. Sci. 22(8),3892 (2021).

[82] Molecular Dynamics—From Small Molecules to Macromolecules. KH Nam*. Int. J. Mol. Sci. 22(7), 3761  (2021).

[81] Structural flexibility of peripheral loops and extended C-terminal domain of short length substrate binding protein from Rhodothermus marinus. JE Bae, IJ Kim, Y Xu, KH Nam*. Protein J. 40, 184–191  (2021).

[80] Crystal structure of the metal-free state of glucose isomerase reveals its minimal open configuration for metal binding. Nam KH*. Biochem. Biophys. Res. Commun. 547, 69-74  (2021). 

[79] Spectroscopic analysis of Fe ion-induced fluorescence quenching of the green fluorescent protein ZsGreen. Kim IJ, Xu Y, Nam KH*. J. Fluoresc. 31, 307–314  (2021). 

[78] Structural analysis of metal chelation of the metalloproteinase thermolysin by 1,10-phenanthroline. Nam KH*. J. Inorg Biochem. 215, 111319  (2021). 

2020 (9)

[77] Approach of Serial Crystallography. Nam KH*. Crystals 10, 854 (2020). 

[76] Fixed-target Serial Synchrotron Crystallography using Nylon Mesh and Enclosed Film-based Sample Holder. Park SY, Choi H, Eo C, Cho Y, Nam KH*. Crystals 10, 803 (2020). 

[75] Lard injection matrix for serial crystallography. Nam KH*.  Int. J. Mol. Sci. 21, 5977 (2020). 

[74] Viscous medium-based crystal support in sample holder for fixed-target serial femtosecond crystallography. Lee K, Lee D, Baek S, Park J, Lee SJ, Park S, Chung WK, Lee JL, Cho HS, Cho Y, Nam KH*. J. Appl. Crystallogr. 53(Pt 4), 1051-1059 (2020). 

[73] Polysaccharide-based injection matrix for serial crystallography. Nam KH*. Int. J. Mol. Sci. 21(9):3332 (2020). 

[72] Application of a high-throughput microcrystal delivery system to serial femtosecond crystallography. Lee D, Lee SJ, Park S, Lee K, Kim J, Park G, Nam KH, Baek S, Chung WK, Lee JL, Cho Y and Park J. J. Appl. Crystallogr. 53(Pt 2), 477-485 (2020). 

[71] Spectroscopic and structural analysis of Cu2+-induced fluorescence quenching of ZsYellow. Kim IJ, Xu Y, Nam KH*. Biosensors. 10(3). pii: E29 (2020). 

[70] Stable sample delivery in viscous media via a capillary for serial crystallography. Nam KH*. J Appl Crystallogr. 53(Pt 1): 45-50 (2020). 

[69] Shortening injection matrix for serial crystallography. Nam KH*. Sci Rep. 10(1):107 (2020). 

2019 (14)

[68] Structural insight into the carboxylesterase BioH from Klebsiella pneumoniae. Wang L, Chen Y, Shang F, Liu W, Lan J, Gao P, Ha NC, Nam KH, Dong Y*, Quan C*, Xu Y*. Biochem. Biophys. Res. Commun. 520(3):538-543 (2019). 

[67] Enzymatic synthesis of l-fucose from l-fuculose using a fucose isomerase from Raoultella sp. and the biochemical and structural analyses of the enzyme. Kim IJ, Kim DH, Nam KH, Kim KH*. Biotechnol. Biofuels. 12:282  (2019). 

[66] Biochemical and structural analysis of the Klebsiella pneumoniae cytidine deaminase CDA. Liu W, Shang F, Chen Y, Lan J, Wang L, Chen J, Gao P, Ha NC, Quan C*, Nam KH*, Xu Y*. Biochem. Biophys. Res Commun. 519(2):280-286  (2019). 

[65] Structural and functional analyses of the lipase CinB from Enterobacter asburiae. Shang F, Lan J, Liu W, Chen Y, Wang L, Zhao J, Chen J, Gao P, Ha NC, Quan C*, Nam KH*, Xu Y*. Biochem. Biophys. Res. Commun. 519(2):274-279  (2019). 

[64] Crystal structure of the Siderophore-interacting protein SIP from Aeromonas hydrophila. Shang F, Lan J, Wang L, Liu W, Chen Y, Chen J, Ha NC, Quan C, Nam KH*, Xu Y*. Biochem. Biophys. Res. Commun. 519(1):23-28  (2019).

[63] Structural insight of the 5-(Hydroxyethyl)-methylthiazole kinase ThiM involving vitamin B1 biosynthetic pathway from the Klebsiella pneumoniae. Chen Y, Wang L, Shang F, Liu W, Lan J, Chen J, Ha NC, Quan C, Nam KH*, Xu Y. Biochem. Biophys. Res. Commun. 518(3):513-518  (2019).

[62] Sample delivery using viscous media, a syringe and a syringe pump for serial crystallography. Park SY, Nam KH*. J. Synchrotron Radiat. 26(Pt 5):1815-1819  (2019).

[61] Triglycine-based approach for identifying the substrate recognition site of an enzyme. Nam KH*. Crystals 9(9), 444  (2019).

[60] Crystal structure of Aeromonas hydrophila cytoplasmic 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase. Chen J, Liu W, Wang L,  Shang F, Chen Y, Lan J, Gao P, Ha NC, Quan C, Nam KH*, Xu Y. Biochemistry. 58(29):3136-3143  (2019). 

[59] Nylon mesh-based sample holder for fixed-target serial femtosecond crystallography. Lee D, Baek S, Park J, Lee K, Kim J, Lee SJ, Chung WK, Lee J-L, Cho Y, Nam KH*. Sci. Rep. 9(1):6971  (2019).

[58] Sample delivery media for serial crystallography. Nam KH*.  Int. J. Mol. Sci. 20(5). pii: E1094  (2019).

[57] Polyacrylamide injection matrix for serial femtosecond crystallography.  Park J, Park S, Kim J, Park G, Cho Y, Nam KH*. Sci. Rep.  9(1):2525  (2019). 

[56] Spectral and structural analysis of a red fluorescent protein from Acropora digitifera.  Kim SE, Hwang KY, Nam KH*.  Protein Sci. 28(2):375-381  (2019).

[55] Apparent Power-Law Behavior of Water’s Isothermal Compressibility and Correlation Length upon Supercooling. Späh A, Pathak H, Kim KH, Perakis F, Mariedahl D, Amann-Winkel K, Sellberg JA, Lee JH, Kim S, Park J, Nam KH, Katayama T, Nilsson A. Phys. Chem. Chem. Phys. 21(1):26-31 (2019). 

2018 (11)

[54] Spectral and Structural Analysis of Large Stokes Shift Fluorescent Protein dKeima570. Xu Y, Hwang KY, Nam KH*.  J. Microbiol. 56(11):822-827 (2018). 

[53] Structural and biochemical analysis of the citrate-responsive mechanism of the regulatory domain of catabolite control protein E from Staphylococcus aureus.  Chen J, Shang F, Wang L, Zou L, Bu T, Jin L, Dong Y, Ha NC, Quan C*, Nam KH*, Xu Y*.  Biochemistry. 57(42):6054-6060 (2018). 

[52] X-ray crystallographic studies of a fluorescent protein Akane1 from Scleronephthya gracillimum. Kim SE, Hwang KY, Nam KH*.  Biodesign  6(3) 51-55 (2018). 

[51] Crystal structure of the nicotinamidase/pyrazinamidase PncA from Bacillus subtilis. Shang F, Chen J, Wang L, Jin L, Zou L, Bu T, Dong Y, Ha NC, Nam KH*, Quan C*, Xu Y*. Biochem. Biophys. Res. Commun. 503(4):2906-2911 (2018).  

[50] Structural analysis of substrate recognition by glucose isomerase in Mn2+ binding mode at M2 site in S. rubiginosus. Bae JE, Hwang KY, Nam KH*.  Biochem. Biophys. Res. Commun. 503(2):770-775 (2018).  

[49] Spectroscopic Analysis of the Cu2+-Induced Fluorescence Quenching of Fluorescent Proteins AmCyan and mOrange2. Bae JE, Kim IJ, Nam KH*.  Mol. Biotechnol. 60(7):485-491 (2018). 

[48] Crystal structure of E. coli ZinT with one zinc-binding mode and complexed with citrate. Chen J, Wang L, Shang F, Dong Y, Ha NC, Nam KH*, Quan C*, Xu Y*. Biochem. Biophys. Res. Commun. 500(2):139-144 (2018).

[47] Response to Comment on "Maxima in the thermodynamic response and correlation functions of deeply supercooled water". Kim KH, Späh A, Pathak H, Perakis F, Mariedahl D, Amann-Winkel K, Sellberg JA, Lee JH, Kim S, Park J, Nam KH, Katayama T, Nilsson A. Science. 360(6390) (2018).

[46] Multifarious injection chamber for molecular structure study (MICOSS) system: development and application for serial femtosecond crystallography at Pohang Accelerator Laboratory X-ray Free-Electron Laser. Park J, Kim S, Kim S, Nam KH. J. Synchrotron Radiat. 25(Pt 2):323-328 (2018).

[45] Crystal structure of a substrate-binding protein from Rhodothermus marinus reveals a single α/β-domain. Bae JE, Kim IJ, Kim KJ, Nam KH*. Biochem. Biophys. Res. Commun. 497(1):368-373 (2018).

[44] Focusing X-ray free-electron laser pulses using Kirkpatrick-Baez mirrors at the NCI hutch of the PAL-XFEL. Kim J, Kim HY, Park J, Kim S, Kim S, Rah S, Lim J, Nam KH*. J. Synchrotron Radiat. 25(Pt 1):289-292 (2018).

2017 (6)

[43] Maxima in the thermodynamic response and correlation functions of deeply supercooled water. Kim KH, Späh A, Pathak H, Perakis F, Mariedahl D, Amann-Winkel K, Sellberg JA, Lee JH, Kim S, Park J, Nam KH, Katayama T, Nilsson A.  Science 358(6370):1589-1593 (2017). 

[42] Hard X-ray free-electron laser with femtosecond-scale timing jitter.  Kang HS, Min CK, Heo H, Kim C, Yang H, Kim G, Nam I, Baek SY, Choi HJ, Mun G, Park BR, Suh YJ, Shin DC, Hu J, Hong J, Jung S, Kim SH, Kim KH, Na D, Park SS, Park YJ, Han JH, Jung YG, Jeong SH, Lee HG, Lee S, Lee S, Lee WW, Oh B, Suh HS, Parc YW, Park SJ, Kim MH, Jung NS, Kim YC, Lee MS, Lee BH, Sung CW, Mok IS, Yang JM, Lee CS, Shin H, Kim JH, Kim Y, Lee JH, Park SY, Kim J, Park J, Eom I, Rah S, Kim S, Nam KH, Park J, Park J, Kim S, Kwon S, Park SH, Kim KS, Hyun H, Kim SN, Kim S, Hwang SM, Kim MJ, Lim CY, Yu CJ, Kim BS, Kang TH, Kim KW, Kim SH, Lee HS, Lee HS, Park KH, Koo TY, Kim DE, Ko IS. Nature Photonics. 11, 708–713 (2017). 

[41] Disruption of the hydrogen bonding network determines the pH-induced non-fluorescent state of the fluorescent protein ZsYellow by protonation of Glu221. Bae JE, Kim IJ, Nam KH*. Biochem Biophys Res Commun. 493(1):562-567 (2017).

[40] Crystal structure of glucose isomerase in complex with xylitol inhibitor in one metal binding mode. Bae JE, Kim IJ, Nam KH*. Biochem Biophys Res Commun. 493(1):666-670 (2017). 

[39] How type II CRISPR-Cas establish immunity through Cas1-Cas2-mediated spacer integration. Xiao Y, Ng S, Nam KH, Ke A. Nature 550(7674):137-141(2017).

[38] Construction and Commissioning of PAL-XFEL Facility. Ko IS, Kang HS, Heo H, Kim C, Kim G, Min CK, Yang H, Baek SY, Choi HJ, Mun G, Park BR, Suh YJ, Shin DC, Hu J, Hong J, Jung S, Kim SH, Kim KH, Na D, Park SS, Park YJ, Jung YG, Jeong SH, Lee HG, Lee S, Lee S, Oh B, Suh HS, Han JH, Kim MH, Jung NS, Kim YC, Lee MS, Lee BH, Sung CW, Mok IS, Yang JM, Parc YW, Lee WW, Lee CS, Shin HC, Kim JH, Kim Y, Lee JH, Park SY, Kim J, Park J, Eom I, Rah S, Kim S,Nam KH, Park J ,Park J, Kim S, Kwon S, An R, Park SH, Kim KS, Hyun H, Kim SN, Kim S, Yu CJ, Kim BS, Kang TH, Kim KW, Kim SH, Lee HS, Lee HS, Park KH,  Koo TY, Kim DE, Lee KB. Appl. Sci. 7(5): 479 (2017).

2016 (4)

[37] Current status of the CXI beamline at the PAL-XFEL. Park J, Kim S, Nam KH, Kim BS, Ko IS. J. Korean Phys. Soc. 69(6):1089-93 (2016).

[36] Crystal structures of Dronpa complexed with quenchable metal ions provide insight into metal biosensor development. Kim IJ, Kim S, Park J, Eom I, Kim S, Kim JH, Ha SC, Kim YG, Hwang KY, Nam KH*. FEBS Lett. 590(17):2982-90 (2016).

[35] Crystal structure of Thermoplasma acidophilum XerA recombinase shows large C-shape clamp conformation and cis-cleavage mode for nucleophilic tyrosine. Jo CH, Kim J, Han AR, Park SY, Hwang KY, Nam KH*. FEBS Lett. 590(6):848-56 (2016).

[34] Design of a hard X-ray beamline and end-station for pump and probe experiments at Pohang Accelerator Laboratory X-ray Free Electron Laser facility.  Park JK, Eom I, Kang TH, Rah SY, Nam KH, Park J, Kim S, Kwon S, Park SH, Kim KS, Hyun H, Kim SN, Lee EH, Shin HC, Kim SH, Kim MJ, Shin HJ, Ahn DC, Lim J, Yu CJ, Song CY, Kim HJ, Noh DY, Kang HS, Kim HS, Kim KW, Ko IS, Cho MH, Kim SN.  Nucl Instrum Methods Phys Res A. 810:74-79 (2016).

2015 (1)

[33] Optimization of synergism of a recombinant auxiliary activity 9 from Chaetomium globosum with cellulase in cellulose hydrolysis. Kim IJ, Nam KH, Yun EJ, Kim S, Youn HJ, Lee HJ, Choi IG, Kim KH. Appl Microbiol Biotechnol. 99(20):8537-47 (2015).

2014 (1)

[32] Structures of CRISPR Cas3 offer mechanistic insights into Cascade-activated DNA unwinding and degradation. Huo Y#, Nam KH#, Ding F, Lee H, Wu L, Xiao Y, Farchione MD Jr, Zhou S, Rajashankar K, Kurinov I, Zhang R, Ke A. Nat Struct Mol Biol. 21(9):771-7 (2014). 

2013 (2)

[31] Binding characteristics of a bacterial expansin (BsEXLX1) for various types of pretreated lignocellulose. Kim IJ, Ko HJ, Kim TW, Nam KH, Choi IG, Kim KH. Appl. Microbiol. Biotechnol. 97(12):5381-8 (2013).

[30] A mutation of the RNA polymerase β' -subunit (rpoC) that confers cephalosporin resistance in Bacillus subtilis. Lee YH, Nam KH, Helmann JD. Antimicrob. Agents Chemother. 57(1):56-65 (2013).

2010 (5)

[024] Biochemical and structural analysis of hormone-sensitive lipase homolog EstE7; Insights into the stabilized dimerization of HSL-homolog proteins. Nam KH, Park SH, LEE WH, Hwang KY. B. Korean Chem. Soc. 2627-32 (2010).

[023] Development of bimolecular fluorescence complementation using Dronpa for visualization of protein-protein interactions in cells. Lee YR, Park JH, Hahm SH, Kang LW, Chung JH, Nam KH, Hwang KY, Kwon IC, Han YS. Mol. Imaging. Biol. 12(5):468-78 (2010). 

[022] Structural characterization of the bifunctional glucanase-xylanase CelM2 reveals the metal effect and substrate-binding moiety.  Nam KH, Lee WH, Rhee KH, Hwang KY. Biochem. Biophys. Res. Commun. 391(4):1726-30 (2010).

[021] Structural insights into the substrate recognition properties of beta-glucosidase. Nam KH, Sung MW, Hwang KY. Biochem. Biophys. Res. Commun. 391(1):1131-5 (2010).

[020] Crystal structure of bacterioferritin from Rhodobacter sphaeroides. Nam KH, Xu Y, Piao S, Priyadarshi A, Lee EH, Kim HY, Jeon YH, Ha NC, Hwang KY. Biochem. Biophys. Res. Commun. 391(1):990-4 (2010).

2009 (10)

[019] The crystal structure of an HSL-homolog EstE5 complex with PMSF reveals a unique configuration that inhibits the nucleophile Ser144 in catalytic triads. Nam KH, Kim SJ, Priyadarshi A, Kim HS, Hwang KY. Biochem Biophys Res Commun. 389(2):247-50 (2009).

[018] Cloning, purification and preliminary X-ray crystallographic analysis of a hypothetical protein, MJ0754, from Methanococcus jannaschii DSM 2661. Lee EH,Nam KH, Hwang KY. Acta Crystallogr Sect F Struct Biol Cryst Commun. 65(Pt 10):1065-7 (2009).

[017] Structural insights into the alanine racemase from Enterococcus faecalis. Priyadarshi A, Lee EH, Sung MW, Nam KH, Lee WH, Kim EE, Hwang KY. Biochim Biophys Acta. 1794(7):1030-40 (2009).

[016] Crystal structure of the periplasmic region of MacB, a noncanonic ABC transporter. Xu Y, Sim SH, Nam KH, Jin XL, Kim HM, Hwang KY, Lee K, Ha NC. Biochemistry. 48(23):5218-25 (2009). 

[015] Crystal structure of CelM2, a bifunctional glucanase-xylanase protein from a metagenome library. Nam KH, Kim SJ, Hwang KY. Biochem Biophys. Res. Commun. 383(2):183-6 (2009). 

[014] Crystal structure of an EfPDF complex with Met-Ala-Ser based on crystallographic packing. Nam KH, Kim KH, Kim EE, Hwang KY. Biochem Biophys Res Commun. 381(4):630-3 (2009).

[013] Structural insights of the MenD from Escherichia coli reveal ThDP affinity. Priyadarshi A, Saleem Y, Nam KH, Kim KS, Park SY, Kim EE, Hwang KY. Biochem Biophys Res Commun. 380(4):797-801 (2009).

[012] Structural and functional analysis of a novel hormone-sensitive lipase from a metagenome library. Nam KH, Kim MY, Kim SJ, Priyadarshi A, Kwon ST, Koo BS, Yoon SH, Hwang KY. Proteins. 74(4):1036-40 (2009).

[011] Structural and functional analysis of a novel EstE5 belonging to the subfamily of hormone-sensitive lipase. Nam KH, Kim MY, Kim SJ, Priyadarshi A, Lee WH, Hwang KY. Biochem Biophys Res Commun. 379(2):553-6 (2009).

[010] Insight into the antibacterial drug design and architectural mechanism of peptide recognition from the E. faecium peptide deformylase structure. Nam KH, Ham JI, Priyadarshi A, Kim EE, Chung N, Hwang KY. Proteins. 74(1):261-5 (2009).

2008 (4)

[009] Crystallization and preliminary X-ray crystallographic analysis of the probable tRNA-modification GTPase (TrmE) from Staphylococcus aureus. Priyadarshi A, Nam KH, Kim EE, Hwang KY. Acta Crystallogr Sect F Struct Biol Cryst Commun. 64(Pt 12):1166-8 (2008).

[008] Structural studies of human brain-type creatine kinase complexed with the ADP-Mg2+-NO3- -creatine transition-state analogue complex. Bong SM, Moon JH, Nam KH, Lee KS, Chi YM, Hwang KY. FEBS Lett. 582(28):3959-65 (2008).

[007] Crystal structure of engineered beta-glucosidase from a soil metagenome. Nam KH, Kim SJ, Kim MY, Kim JH, Yeo YS, Lee CM, Jun HK, Hwang KY. Proteins. 73(3):788-93 (2008).

[006] Crystallization and preliminary X-ray diffraction analysis of 5,10- methylenetetrahydrofolate dehydrogenase/cyclohydrolase from Thermoplasma acidophilum DSM 1728. Kim JH, Sung MW, Lee EH, Nam KH, Hwang KY. J Microbiol Biotechnol. 18(2):283-6 (2008).

2007 (3)

[005] Structural and mutational analysis of tRNA intron-splicing endonuclease from Thermoplasma acidophilum DSM 1728: catalytic mechanism of tRNA intron-splicing endonucleases. Kim YK, Mizutani K, Rhee KH, Nam KH, Lee WH, Lee EH, Kim EE, Park SY, Hwang KY.  J. Bacteriol. 189(22):8339-46 (2007).

[004] Crystal structure of the tRNA-specific adenosine deaminase from Streptococcus pyogenes. Lee WH, Kim YK, Nam KH, Priyadarshi A, Lee EH, Kim EE, Jeon YH, Cheong C, Hwang KY. Proteins. 68(4):1016-9 (2007).

[003] Structural characterization of the photoswitchable fluorescent protein Dronpa-C62S. Nam KH, Kwon OY, Sugiyama K, Lee WH, Kim YK, Song HK, Kim EE, Park SY, Jeon H, Hwang KY. Biochem. Biophys. Res. Commun. 354(4):962-7 (2007).

2006 (1)

[002] Expression, purification, and preliminary X-ray crystallographic analysis of the complex of G(alphai3)-RGS5 from human with GDP/Mg2+/AlF4-. Rhee KH, Nam KH, Lee WH, Ko YG, Kim EE, Hwang KY. Protein Pept Lett. 13(9):945-9 (2006).

2005 (1)

[001] Crystallization and preliminary X-ray crystallographic analysis of the tRNA-specific adenosine deaminase from Streptococcus pyogenes. Ku MJ, Lee WH, Nam KH, Rhee KH, Lee KS, Kim EE, Yu MH, Hwang KY.  Acta Crystallogr Sect F Struct Biol Cryst Commun. 61(Pt 4):375-7 (2005).