Ina Bang

• Research Interests

Systems biology, Microbiology, Bioinformatics, Multi-omics data processing, NGS data analysis pipeline construction, Transcriptional regulatory network reconstruction

• Education

Kyung Hee University, Korea, 2019

Degree: B.S. Genetic Engineering

Thesis : Comparative genomic analysis on Clostiridium phage

Adviser : Dr. Donghyuk Kim

• Awards

2019 | KSBB Fall Meeting and International Symposium ( Poster session ) - Site
Reconstruction of Pan-regulons for Fur uncovers the conservation of its transcriptional gene regulatory network in the E. coli

2022 | KMB 49th Annual Meeting & International Symposium ( Poster session ) - Site
DUCSU: Deep learning model-based United ChIP-exo peak Selection Utility

2023 | KMB 50th Anniversary, 2023 Annual Meeting & International Symposium ( Poster session ) - Site
Reconstruction of Pan-regulons for CRP uncovers the conservation of its transcriptional gene regulatory network in the E. coli

2024 | 2024 KIChE Spring Meeting ( Poster session ) - Site
Deciphering the Conservation of CRP Transcriptional Regulatory Network across Diverse Escherichia coli Strains

• Grants

2023.09 ~  | Basic Science Research Program, National Research Foundation of Korea(NRF)
학문후속세대지원사업

• Experience

Intern | 2017, Systems biology lab of Dr. Donghyuk Kim, Kyung Hee University

Research Assistant | 2018, Systems biology lab of Dr. Donghyuk Kim, Kyung Hee University

• Publications (#co-first author, *co-corresponding author) 

Google Scholar

9 papers were published: 6 first-author (co-first included) papers and 3 co-author papers.

The Escherichia coli Fur pan-regulon has few conserved but many unique regulatory targets. Gao Y#, Bang I#, Seif Y, Kim D*, Palsson BO*. Nucleic Acids Res. 2023 Apr 07. doi:10.1093/nar/gkad253.

on the media 대장균 균주의 전사 조절, 새로운 개념으로 이해한다 & BRIC 한빛사 방인아

Deep-learning optimized DEOCSU suite provides an iterable pipeline for accurate ChIP-exo peak calling. Bang I#, Lee SM#, Park S#, Park JY, Gao Y, Palsson BO, Kim D. Brief Bioinform. 2023 Jan 25. doi:10.1093/bib/bbad024.

on the media UNIST, 딥러닝 기반 단백질 결합 분석 소프트웨어 개발 & BRIC 한빛사 방인아

ChEAP: ChIP-exo Analysis Pipeline and the investigation of Escherichia coli RpoN protein-DNA interactions. Bang I#, Nong LK#, Park JY, Le HT, Lee SM, Kim D. Comput Struct Biotechnol J. 2022 Dec 02. doi:10.1016/j.csbj.2022.11.053.

Characterization of an Entner-Doudoroff pathway-activated Escherichia coli. Kim YE#, Cho KH#, Bang I#, Kim CH, Ryu YS, Kim Y, Choi EM, Nong LK, Kim D*, Lee SK*. Biotechnol Biofuels Bioprod. 2022 Nov 09. doi.org/10.1186/s13068-022-02219-6

Enhanced production of nonanedioic acid from nonanoic acid by engineered Escherichia coli. Lee Y, Sathesh-Prabu C, Kwak GH, Bang I, Jung HW, Kim D, Lee SK. Biotechnol J. 2021 May 08. doi:10.1002/biot.202000416.

Genome-wide Identification of DNA-protein Interaction to Reconstruct Bacterial Transcription Regulatory Network. Park JY#, Rimal H#, Bang I, Nong LK, Kim D. Biotechnol Bioprocess Eng. 2020 Dec 29. doi:10.1007/s12257-020-0030-9.

Genome sequence of the potential probiotic eukaryote Saccharomyces cerevisiae KCCM 51299. Hwang J#, Bang I#, Kim D, Shin SC, Chin YW, Kim TW, Kim HJ. 3 Biotech. 2020 Mar 30. doi:.

Fermentation product with new equol-producing Lactobacillus paracasei as a probiotic candidate for prevention of skin and intestinal disorder. Kwon JE#, Lim J#, Bang I, Kim I, Kim D*, Kang SC*. J Sci Food Agric. 2019 Feb 14. doi.org/10.1002/jsfa.9648.

Draft genome sequence of lytic bacteriophage KP1 infecting Klebsiella pneumoniae. Kim Y#, Bang I#, Yeon YE, Park JY, Han BK, Kim H, Ahn JK, Kim D. Korean J Microbiol. 2018 Jul 2. doi.org/10.7845/kjm.2018.54.2.152.