Embedded Files
- Investigation of multiple-dynein transport of melanosomes by non-invasive force measurement using the fluctuation theorem
S. Hasegawa, T. Sagawa, K. Ikeda, Y. Okada and K. Hayashi*
preprint(arxiv) http://arxiv.org/abs/1808.03469
- Application of the fluctuation theorem to motor proteins: from F1-ATPase to axonal cargo transport by kinesin and dynein.
K. Hayashi, Biophysical Reviews (2018)
https://link.springer.com/article/10.1007/s12551-018-0440-5
preprint(arxiv) https://arxiv.org/abs/1807.01067
- Application of the fluctuation theorem for non-invasive force measreument in living neuronal axons.
K. Hayashi*, Y. Tsuchizawa, M. Iwaki and Y. Okada*, Molecular Biology of the Cell (MBoC), in press.
preprint(Biorxiv) https://www.biorxiv.org/content/early/2017/12/13/233064
- Non-invasive force measurement reveals the number of active kinesins on a synaptic vesicle precursor in axonal transport regulated by ARL-8.
K. Hayashi*, S. Hasegawa, T. Sagawa, S. Tasaki and S. Niwa*, Phys. Chem. Chem. Phys. 20, 3403-3410 (2018).
http://pubs.rsc.org/en/content/articlehtml/2018/cp/c7cp05890j
preprint(arxiv) https://arxiv.org/abs/1802.09741
- Giant enhancement of fluctuation in small biological systems under external fields
K. Hayashi*, S. Hasegawa and S. P. Tsunoda, J. Stat. Mech. 054028 (2016).
http://iopscience.iop.org/article/10.1088/1742-5468/2016/05/054028/meta
- Giant acceleration of diffusion observed in a single-molecule experiment on F1-ATPase.
R. Hayashi, K. Sasaki, S. Nakamura, S. Kudo, Y. Inoue, H. Noji and K. Hayashi* , Phys. Rev. Lett. 114, 248101 (2015).
http://journals.aps.org/prl/abstract/10.1103/PhysRevLett.114.248101#fulltext
- F-subunit reinforces torque generation in V-ATPase.
J. Kishikawa, A. Seino, A. Nakanishi, N. E. Tirtom, H. Noji, K. Yokoyama*, K. Hayashi*, Euro. Biophys. J. 43 p415-422 (2014)
- Viscosity and drag force involved in organelle transport:Investigation of the fluctuation dissipation theorem.
K. Hayashi*, C. G. Pack, M. K. Sato, K. Mouri, K. Kaizu, K. Takahashi, Y. Okada, Eur. Phys. J. E 36 136 (2013)
http://epje.epj.org/articles/epje/abs/2013/12/10189_2013_Article_9950/10189_2013_Article_9950.html
- Catalysis enhancement via rotary fluctuation of F1-ATPase.
Rikiya Watanabe, Kumiko Hayashi, Hiroshi Ueno and Hiroyuki Noji*, Biophys. J. 105 2385-2391 (2013)
- Protein motor F1 as a model system for fluctuation theories of non-equilibrium statistical mechanics.
Kumiko Hayashi* and Ryunosuke Hayashi, Fluctuation and Noise Letters, 11 124001 (2012)
http://www.worldscientific.com/doi/abs/10.1142/S0219477512410015
- Single-molecule stochastic resonance
Kumiko Hayashi, Sara de Lorenzo, Maria Manosas, Josep Maria Huguet and Felix Ritort*, Phys. Rev. X, 2 031012 (2012)
- Measurements of the driving forces of bio-motors using the fluctuation theorem
Kumiko Hayashi*, Mizue Tanigawara and Jun-ichi Kishikawa, BIOPHYSICS, 8 67-72 (2012)
https://www.jstage.jst.go.jp/article/biophysics/8/0/8_0_67/_article/-char/ja/
- INTECH Book Title: Biotechnology/Book2 (ISBN 979-953-307-671-2) Chapter title: Controlling cell migrations with micropatterns
Taro Toyota, Yuichi Wakamoto, Kumiko Hayashi and Kiyoshi Ohnuma* (2012)
http://www.intechopen.com/articles/show/title/controlling-cell-migration-with-micropatterns
- Improving signal-to-noise resolution in single molecule experiments using molecular constructs with short handles.
Nuria Forns, Sara de Lorenzo, Maria Manosas, Kumiko Hayashi, Josep Maria Huguet and Felix Ritort*, Biophys. J 100 1765 (2011) (
- Fluctuation theorem applied to F1-ATPase
Kumiko Hayashi*, Hiroshi Ueno, Ryota Iino and Hiroyuki Noji*, Phys. Rev. Lett. 104, 218103 (2010)
- Fluctuation theorem applied to Dictyostelium discoideum system, Kumiko Hayashi and Hiroaki Takagi*, J. Phys. Soc. Jpn. 76, 105001 (2007).
- Temperature of a Hamiltonian system given as the effective temperature of a non-equilibrium steady state Langevin thermostat, Kumiko Hayashi* and Mitsunori Takano, Phys. Rev. E 76, 050104 (2007) (Rapid communications).
- Violation of the fluctuation-dissipation theorem in a protein system, Kumiko Hayashi* and Mitsunori Takano, Biophys. J. 93, 895-901 (2007).
- Computation of the Kolmogorov-Sinai entropy using statistical mechanics: Applicationof an exchange Monte Carlo method, Shin-ichi Sasa* and Kumiko Hayashi, Europhys. Lett. 74, 156-162 (2006).
- The law of action and reaction for the effective force in a nonequilibrium colloidal system, Kumiko Hayashi and Shin-ichi Sasa, J. Phys.: Condens. Matter. 18 (2006) 2825-2836.
- Linear response theory in stochastic many-body systems revisited, Kumiko Hayashi and Shin-ichi Sasa, Physica A 370, 407-429 (2006).
- Exact transformation of a Langevin equation to a fluctuating response equation, Takahiro Harada, Kumiko Hayashi and Shin-ichi Sasa, J. Phys. A: Math. Gen. 38 (2005) 3799-3812.
- Extended Einstein relations with a complex effective temperature in a one-dimensional driven lattice gas, Kumiko Hayashi and Shin-ichi Sasa, Phys. Rev. E 71, 046143 (2005).
- Decomposition of force fluctuations far from equilibrium, Kumiko Hayashi and Shin-ichi Sasa, Phys. Rev. E 71, 020102 (2005) (Rapid communications).
- Fluctuation-dissipation relations outside the linear response regime in a two-dimensional driven lattice gas along the direction transverse to the driving force, Kumiko Hayashi, Phys. Rev. E 72, 047105 (2005).
- Effective temperature in nonequilibrium steady states of Langevin systems with a tilted periodic potential, Kumiko Hayashi and Shin-ichi Sasa, Phys. Rev. E 69, 066119 (2004).
- Thermodynamic relations in a driven lattice gas: numerical experiments, Kumiko Hayashi and Shin-ichi Sasa, Phys. Rev. E 68, 035104 (2003) (Rapid communications).
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