RESEARCH ARTICLES
RESEARCH ARTICLES
Sharma M, Pandey GK (2018) OsPUB75, an Armadillo/U-box protein interacts with GSK3 kinase and function as negative regulator of abiotic stress response (in press Environmental and Experimental Botany).
Yadav AK, Jha SK, Sanyal SK, Luan S, Pandey GK. (2018) Arabidopsis Calcineurin B-like proteins differentially regulate phosphorylation activity of CBL-interacting protein kinase 9. Biochem J. 2018 Jul 27. pii: BCJ20180372. doi: 10.1042/BCJ20180372.
Singh A, Yadav AK, Kaur K, Sanyal SK, Jha SK, Fernandes JL, Sharma P, Tokas I, Pandey A, Luan S, Pandey GK (2018) Protein Phosphatase 2C, AP2C1 Interacts with and Negatively Regulates the Function of CIPK9 under Potassium Deficient Conditions in Arabidopsis. J. Exp. Bot. 2018 May 15. doi: 10.1093/jxb/ery182.
Shankar A, Fernandes JL, Kaur K, Sharma M, Kundu S, Pandey GK (2018) Rice Phytoglobin regulate responses under low mineral nutrients and abiotic stresses in Arabidopsis thaliana. Plant Cell Environ. 2018 Jan;41(1):215-230.
Nikalje GC, Srivastava AK, Sablok G, Pandey GK, Nikama TD, Suprasanna P (2017) Identification and validation of reference genes for quantitative real-time PCR under salt stress in a halophyte, Sesuvium portulacastrum. Plant Gene 13 (2018) 18–24.
Sanyal SK, Kanwar PK, Samtani S, Kaur K, Jha SK and Pandey GK (2017) Alternative Splicing of CIPK3 Results in Distinct Target Selection to Propagate ABA Signaling in Arabidopsis. Front. Plant Sci. 8:1924. doi: 10.3389/fpls.2017.01924
Zhang DY, Huang Y, Kumar M, Wan Q, Xu Z, Shao HB, Pandey GK (2017) Heterologous expression of GmSIP1; 3 from soybean in tobacco showed and growth retardation and tolerance to hydrogen peroxide. Plant Science. 263; 210-218.
Pandey A, Yadav V, Sharma A, Khurana JP, Pandey GK (2017) The unc-53 gene negatively regulates rac GTPases to inhibit unc-5 activity during Distal tip cell migrations in C. elegans. Cell Adh Migr. 2017 Jul 5:1-9. doi: 10.1080/19336918.2017.
Zhang DY, Kumar M, Xu L, Wan Q, Huang YH, Xu ZL, He XL, Ma JB, Pandey GK, Shao HB (2017) Genome-wide identification of Major Intrinsic Proteins in Glycine soja and characterization of GmTIP2;1 function under salt and water stress. Sci Rep. 2017 Jun 23;7(1):4106.
Sanyal SK, Kanwar P, Yadav AK, Sharma C, Kumar A, Pandey GK (2017) Arabidopsis CBL interacting protein kinase 3 interacts with ABR1, anAPETALA2 domain transcription factor, to regulate ABA responses. Plant Science 254: 48-59.
Zhao P, Sokolov LS, Ye J, Tang CY, Shi J, Zhen Y, Lan W, Hong Z, Qi J, Lu GH, Pandey GK*, Yang YH (2016) The LIKE SEX FOUR2 regulates root development by modulating reactive oxygen species homeostasis in Arabidopsis. Sci Rep. 2016 Jun 28;6:28683. doi: 10.1038/srep28683.
Yadav AK, Shankar A, Jha SK, Kanwar P, Pandey A and Pandey GK (2015) A rice tonoplastic calcium exchanger, OsCCX2 mediates Ca2+/cation transport in yeast. Scientific Reports 26;5:17117.
Pandey GK*, Kanwar P, Singh A, Steinhorst L, Pandey A, Yadav AK, Tokas I, Sanyal S, Beom- Kim B-G, Lee SC, Cheong YH, Kudla J, Luan S (2015) CBL-interacting protein kinase, CIPK21, regulates osmotic and salt stress responses in Arabidopsis. Plant Physiol. 169(1):780-92.
Singh A, Jha SK, Bagri J, Pandey GK (2015) ABA Inducible Rice Protein Phosphatase 2C Confers ABA Insensitivity and Abiotic Stress Tolerance in Arabidopsis. PLoS One. 17;10(4):e0125168.
Kanwar P, Sanyal SK, Tokas I, Yadav AK, Pandey A, Kapoor S, Pandey GK (2014) Comprehensive structural, interaction and expression analysis of CBL and CIPK complement during abiotic stresses and development in rice. Cell Calcium, 56: 81–95.
Shankar A, Srivastava AK, Yadav AK, Sharma M, Pandey A, Raut CC, Das KM, Suprasanna P, Pandey GK (2014) Whole Genome Transcriptome Analysis of Rice Seedling Reveal Alterations in Ca2+ Ion Signaling and Homeostasis in Response to Ca2+ Deficiency. Cell Calcium 55: 155-165.
Sharma M, Singh A, Shankar A, Pandey A, Baranwal V, Kapoor S, Tyagi AK, Pandey GK (2014) Comprehensive Expression Analysis of Rice Armadillo Gene Family During Abiotic Stress and Development. DNA Research 21:267-83.
Singh A, Kanwar P, Yadav AK, Mishra M, Jha SK, Baranwal V, Pandey A, Kapoor S, Tyagi AK, Pandey GK. Genome-wide expressional and functional analysis of calcium transport elements during abiotic stress and development in rice. FEBS Journal 281 (2014) 894–915.
Shankar A, Singh A, Kanwar P, Srivastava AK, Pandey A, Suprasanna P, Kapoor S, Pandey GK (2013) Gene Expression Analysis of Rice Seedling Under Potassium Deprivation Reveals Major Changes in Metabolism and Signaling Components. PLoS ONE 8(7): e70321.
Mishra M, Kanwar P, Singh A, Pandey A, Kapoor S, Pandey GK (2013) Plant Omics: Genome-wide Analysis of ABA Repressor1 (ABR1) Related Genes in Rice During Abiotic Stress and Development. OMICS: Journal of Integrative Biology, 17: 439-45
Singh A, Kanwar P, Pandey A, Tyagi AK, Sopory SK, Kapoor S, Pandey GK (2013) Comprehensive Genomic Analysis and Expression Profiling of Phospholipase C gene family during Abiotic Stresses and Development in Rice. PLoS One. 8(4):e62494.
Singh A, Baranwal V, Shankar A, Kanwar P, Ranjan R, Yadav S, Pandey A, Kapoor S, Pandey GK (2012). Rice phospholipase A superfamily: organization, phylogenetic and expression analysis during abiotic stresses and development. PLos One 7(2).
Singh A, Pandey A, Baranwal V, Kapoor S, Pandey GK (2012) Comprehensive Expression Analysis of Rice Phospholipase D Gene Family During Abiotic Stresses and Development. Plant Signaling & Behavior. 7:7, 1–8.
Singh A, Giri J, Kapoor S, Tyagi AK, Pandey GK (2010) Protein phosphatase complement in rice: genome-wide identification and transcriptional analysis under abiotic stress conditions and reproductive development. BMC Genomics. 11(1): 435.
Cheong YH, Sung SJ, Kim B-G, Pandey GK, Cho JS, Kim K-N, Luan S (2010) Constitutive overexpression of the calcium sensor CBL5 confers osmotic or drought stress tolerance in Arabidopsis. Mol Cells. 29(2):159-65.
Li L, Sokolov LN, Yang YH, Li DP, Ting J, Pandey GK, Luan L (2008) A Mitochondrial Magnesium Transporter Functions in Arabidopsis Pollen Development. Mol Plant 1: 675-685.
Pandey GK, Grant JJ, Cheong YH, Kim BG, Li L, Luan S (2008) Calcineurin-B-Like Protein CBL9 Interacts with Target Kinase CIPK3 in the Regulation of ABA Response in Seed Germination. Mol. Plant 2008 1: 238-248;
Cheong YH, Pandey GK, Grant JJ, Batistic O , Li L, Kim B-G, Lee SC, Kudla J, Luan S (2007) Two calcineurin B-like calcium sensors, interacting with protein kinase CIPK23, regulate leaf transpiration and root potassium uptake in Arabidopsis. Plant J. 52(2): 223-39.
Lee SC, Lan W-Z, Kim B-G, Li L, Cheong YH, Pandey GK, Lu G, Buchanan BB, Luan S (2007) A protein phosphorylation/dephosphorylation network regulates a plant potassium channel. Proc. Natl. Acad. Sci. U S A. 104(40):15959-64.
Kim B-G, Waadt R, Cheong YH, Pandey GK, Dominguez-Solis JR, Schultke S, Lee SC, Kudla J, Luan S (2007) The calcium sensor CBL10 mediates salt tolerance by regulating ion homeostasis in Arabidopsis. Plant J. 52(2):223-39.
Pandey GK, Cheong YH, Kim B-G, Grant JJ, Li L, Luan S (2007) CIPK9: a calcium sensor-interacting protein kinase required for low-potassium tolerance in Arabidopsis. Cell Res. 17(5):411-21.
Pandey GK, Pandey A, Reddy VS, Deswal R, Bhattacharya A, Sopory SK (2007) Antisense expression of a gene encoding a calcium binding protein in transgenic tobacco leads to an altered morphology and enhanced chlorophyll. J. Biosci. 32(2):251-60.
D’Angelo C, Weinl S, Batistic O, Pandey GK, Cheong YH, Albrecht V, Luan S, Bock R, Kudla J (2006). Alternative complex formation of the Ca2+-regulated protein kinase CIPK1 controls abscisic acid-dependent and independent stress responses in Arabidopsis. Plant J. 48 (6):857-872.
Li L, Kim B-G , Cheong YH, Pandey GK, Luan S (2006) A Ca2+ signaling pathway regulates a K+ channel for low-K response in Arabidopsis. Proc Natl Acad Sci U S A. 103 (33):12625-30. 8.
Pandey GK, Grant JJ, Cheong YH, Kim B-G, Li L, Luan L (2005) ABR1, an AP2-Domain Transcription Factor that Functions as a Repressor of ABA Response in Arabidopsis. Plant Physiology, 139: 1185-1193
Pandey GK, Kim K-N, Cheong YH, Grant JJ, Li L, Hung W, D’Angelo C, Weinl S, Kudla J, Luan S (2004) The calcium sensor CBL9 modulates ABA sensitivity and biosynthesis in Arabidopsis. Plant Cell, 16: 1912-1924.
Pandey GK1, Cheong YH1, Kim KN1, Gupta R, Grant JJ, Luan S (2003) CBL1, a calcium sensor that differentially regulates salt, drought, ABA, and cold responses in Arabidopsis. Plant Cell, 15: 1833-1845 (1 Equal contribution to this work)
Kim K-N, Cheong YH, Grant JJ, Pandey GK Luan S (2003) CIPK3, a calcium sensor-associated protein kinase that regulate abscisic acid and cold signal transduction in Arabidopsis. Plant Cell, 15: 1-15.
Li L, He Z, Pandey GK, Tsuchiya T, Luan S (2002) Functional cloning and characterization of a plant efflux carrier for multidrug and heavy metal detoxification. J. Bio. Chem. 277: 5360-5366.
Pandey GK, Reddy VS, Reddy MK, Deswal R, Bhattacharya A, Sopory SK (2002) Transgenic tobacco expressing Entamoeba histolytica calcium binding protein exhibits enhanced growth and tolerance to salt stress. Plant Sci 162 :41-47.
Deswal R, Pandey GK, Chandok MR, Yadav N, Bhattacharya A, Sopory SK (2000) A novel protein kinase from Brassica juncea stimulated by a protozoan calcium binding protein: Purification and partial characterization. Eur. J. Biochem. 267: 3181-3188.
REVIEW
Bheri M, Pandey GK (2018) Protein Phosphatases Meet Reactive Oxygen Species in Plant Signaling Networks (in press Environment and Experimental Botany).
Yadav K, Jha SK, Sharma M, Pandey GK (2018) Mitogen activated kinase: A versatile signaling cascade in plants. Journal of Proteins and Proteomics, 9(1) 2018 pp 57-72.
Sharma M, Pandey GK (2018) Editorial: Genomics and Functional Genomics of Stress-mediated Signaling in Plants: Volume II. Curr Genomics. 2018 Jan;19(1):2-3.
Sharma M, Pandey GK (2017) Editorial: Genomics and Functional Genomics of Stress-mediated Signaling in Plants: Volume I. Current Genomics. 2017 Dec;18(6):467-468
Nikalje GC, Srivastava AK, Pandey GK, Suprasanna P (2017) Halophytes in biosaline agriculture: mechanism, utilization and value addition. Land Degradation & Development 29 (4), 1081-1095.
Jha SK, Malik S, Sharma M, Pandey A and Pandey GK (2017) Recent advances in substrate identification of protein kinases in plants and their role in stress management. Curr Genomics. 2017 Dec;18(6):523-541.
Singh A and Pandey GK (2017) How Phospholipase C Regulates Stress Tolerance and Development in Plants? J. Cell Signal 1: 132.
Pandey GK, Pandey A, Prasad M, Böhmer M (2016) Editorial: Abiotic Stress Signaling in Plants: Functional Genomic Intervention.Front Plant Sci. 2016 May 20;7:681. doi: 10.3389/fpls.2016.00681. eCollection 2016.
Pandey A, Sharma M, Pandey GK (2016) Emerging Roles of Strigolactones in Plant Responses to Stress and Development. Front Plant Sci. 2016 Apr 5;7:434. doi: 10.3389/fpls.2016.00434. eCollection 2016.
Sharma M and Pandey GK (2016) Expansion and Function of Repeat Domain Proteins During Stress and Development in Plants. Front Plant Sci. 11;6:1218.
Jha SK, Sharma M, Pandey GK (2016) Role of Cyclic Nucleotide Gated Channels in Stress Management in Plants. Current Genomics 17(4), 315-329.
Singh A, Pandey A, Srivastava AK, Tran LP, Pandey GK (2015) Plant protein phosphatases 2C: from genomic diversity to functional multiplicity and importance in stress management. Critical Rev Biotechnol. 18:1-13.
Shankar A, Agrawal N, Sharma M, Pandey A, Pandey GK (2015) Role of Protein Tyrosine Phosphatases in Plants. Current Genomics, 2015, 16, No. 4, pp
Sanyal SK, Pandey A, Pandey GK (2015) The CBL-CIPK signaling module in plants: a mechanistic perspective. Physiol Plant. 2015 May 7. doi: 10.1111/ppl.12344.
Singh A, Bhatnagar N, Pandey A, Pandey GK (2015) Plant phospholipase C family: Regulation and functional role in lipid signaling. Cell Calcium. 58(2):139-46.
Sharma M, Pandey GK (2015) DUBs: Regulation by Reversible Ubiquitination. J Mol Biol & Mol Imaging. 2(1): 1014.
Sharma M, Pandey A, Pandey GK (2014) β-catenin in Plants and Animals: Common Players but Different Pathways. Frontiers in Plant Science- Plant Genetic and Genomics, 10;5:143.
Singh A, Pandey A, Pandey GK (2012) Phospholipase D in stress activated signaling lipid signaling in plants. Plant Stress; 6 (1): 10-17.
Yadav AK, Pandey A, Pandey GK (2012) Calcium Homeostasis: Role of CAXs Transporters in Plant Signaling. Plant Stress; 6 (1): 60-69.
Sharma M, Pandey A, Pandey GK (2013). Role of Plant U-BOX (PUB) Protein in Stress and Development. Plant Stress; 7(1):1-9.
Shanmugam T, Sharma M, Pandey A, Pandey GK (2013). Small GTPases: Rho of Plant (ROP) in Development and Stress Signaling. Plant Stress; 7(1): 10-15.
Shanker A, Pandey A, Pandey GK (2013). WRKY Transcription Factor: Role in Abiotic and Biotic Stress. Plant Stress; 7(1): 26-34.
Singh A, Pandey GK (2012). Protein phosphatases: a genomic outlook to understand the function in plants. J. Plant Biochem. Biotechnol. DOI 10.1007/s13562-012-0150-1.
Das R, Pandey GK Expressional Analysis and Role of Calcium Sensing Kinases in Abiotic Stress Signaling. Current Genomics. 2010,11: 2-13.
Pandey GK, Yadav AK, Kanwar P, Tuteja N (2010) Role of calcium in regulating potassium-sodium homeostasis and nutrition signaling under stress condition. Plant Stress 4 (Special Issue 2), 94-103.
Mishra M, Das R, Pandey GK (2009) Role of ethylene responsive factors (ERFs) in abiotic stress mediated signaling in plants. eJournal of Biological Sciences, 1:133-146.
Mahajan S, Pandey GK, Tuteja N (2008) Calcium- and salt-stress signaling in plants: shedding light on SOS pathway. Arch Biochem Biophys. 15; 471 (2): 146-58.
Pandey GK (2008) Emergence of a Novel Calcium Signaling Pathway in Plants: CBL-CIPK Signaling Network. Physiol. Mol. Biol. Plants, 14: 51-68.
Pandey GK, Reddy MK, Sopory SK and Singla-Pareek S (2002) Calcium homeostasis in plants: Role of calcium binding proteins in abiotic stress tolerance. Ind. J. Biotech. Vol.1:135-157.
POPULAR ARTICLES
Sanyal SK and Pandey GK (2017) How plants transmit signals through alternate routes during stress conditions? CBL-CIPK mediated calcium signaling. Atlas of Science, http://atlasofscience.org.
Agrawal AV and Pandey GK (2017) A dual specificity protein phosphatase and redox homeostasis in plants. Atlas of Science, http://atlasofscience.org.
Jha SK, Pandey GK (2017) Emerging roles of Cyclic Nucleotide Gated Channels in Plants. Atlas of Science, http://atlasofscience.org.
Sharma M and Pandey GK (2017) Abiotic stress signaling in plants: functional genomics intervention. Atlas of Science, http://atlasofscience.org.
Sanyal SK and Pandey GK (2017) A messanger and its disciples: Spreading stress messages in plants through Ca2+-CBL-CIPK network. Atlas of Science, http://atlasofscience.org.
Singh A and Pandey GK (2016) Phospholipase C break membrane lipid during plant adpatation under stress. Atlas of Science, http://atlasofscience.org
BOOK CHAPTERS
Sanyal SK, Rao S, Mishra LK, Sharma M, Pandey GK* (2016) Plant Stress Responses Mediated by CBL-CIPK Phosphorylation Network. Enzymes. 2016;40:31-64.
Das R, Pandey A, Pandey GK* (2015) Signaling Pathways in Eukaryotic Stress, Aging, and Senescence: Common and Distinct Pathways. In G.K. Pandey (ed.), Elucidation of Abiotic Stress Signaling in Plants, Springer Science+Business Media New York 2015 DOI 10.1007/978-1-4939-2211-6_9.
Pandey A, Sharma M, Pandey GK* (2015) Small and Large G Proteins in Biotic and Abiotic Stress Response in Plants. In G.K. Pandey (ed.), Elucidation of Abiotic Stress Signaling in Plants, Springer Science+Business Media New York 2015 DOI 10.1007/978-1-4939-2211-6_9.
Sinha S, Kukreja B, Arora P, Sharma M, Pandey GK, Agarwal M, Chinnusamy V (2015) The Omics of Cold Stress Responses in Plants. In G.K. Pandey (ed.), Elucidation of Abiotic Stress Signaling in Plants, Springer Science+Business Media New York 2015 DOI 10.1007/978-1-4939-2211-6_9.
Singh S, Pandey GK* (2015) Primer Design Using Primer Express® for SYBR Green-Based Quantitative PCR. Chhandak Basu (ed.), PCR Primer Design, Methods in Molecular Biology, vol. 1275,DOI 10.1007/978-1-4939-2365-6_11, © Springer Science+Business Media New York 2015.
Das R, Pandey A, Pandey GK* (2014) Role of Calcium/Calmodulin in Plant Stress Response and Signaling. In eds. Gaur, R.K. and Sharma, Pradeep. Approaches to Plant Stress and their Management. Springer India - New Delhi, ISBN 9788132216209.
Tokas I, Pandey A, Pandey GK* (2013) Role of Calcium-Mediated CBL–CIPK Network in Plant Mineral Nutrition and Abiotic Stress. In eds G.R. Rout and A.B. Das. Molecular Stress Physiology of Plants 241 DOI 10.1007/978-81-322-0807-5_10.
Sharma C, Pandey A, Pandey GK* (2011) Role of Calcium in Stress Mediated Signaling in Plants. In: Calcium Signaling, Editor: Masayoshi Yamaguhi, ISBN: 978-1-61324-313-8 ©2011 Nova Science Publishers, Inc.
Chae L1 , Pandey GK 1, Cheong YH1, Kim KN1, Luan S (2010) Protein Kinases and Phosphatases for Stress Signal Transduction in Plants. In Abiotic Stress Adaptation in Plants: Physiological, Molecular and Genomic Foundation, eds. A Pareekh, S K Sopory, H J Bohnart, Govindjee. 123-164, The Netherland: Springer (1 Equally contributed for this work).
Pandey GK, Veena, Deswal R, Reddy VS, Bhattacharya A, Reddy MK, Sopory SK (2003) Development of stress tolerance by manipulating the expression of calcium binding proteins. In: Prasad BN (ed) Biotechnology in sustainable biodiversity and food security. Science Publishers, Inc.(Enfield) USA, ISBN 1-57808-268.
Pandey GK, Veena, Deswal R, Pandey S, Tewari SB, Tyagi W, Reddy VS, Bhattacharya A, Sopory SK (2001) Calcium signaling: downstream components in plants. In: Maheshwari, SC, Oelmuller, Sopory, SK (eds) Signal transduction in plants: Current Advances. Kluwer Academic publisher, New York, ISBN 0306466716.
EDITED Book/Volume
Pandey GK (2018) Genomics and functional genomics of stress-mediated signaling in plants Vol I & Vol. II, Current Genomics Vo.18 and 19, ISSN: 1389-2029.
Pandey GK (2017) Mechanism of hormone signaling under stress, Wiley-Blackwell, USA, ISBN 13: 9781118888964
Pandey GK, Manoj Prasad, Amita Pandey, Maik Böhmer eds. (2016). Abiotic Stress Signaling in Plants: Functional Genomic Intervention. Lausanne: Frontiers Media. doi: 10.3389/978-2-88919-891-7.
Pandey GK (2015) Elucidation of biotic stress signaling in plants: Functional Genomics perspective, Vol. 1&2. Springer+Business Media, New York, ISBN: 978-1-4939-2210-9.
Pandey GK, Sharma M, Pandey A, Shanmugam T (2014). GTPases: Versatile regulator of signal transduction in plants. Springerbrief in Plant Sciences. ISBN-13: 978-3319116105.
Pandey GK, Kanwar P, Pandey (2014). Global Comparative Analysis of CBL-CIPK Gene Families in Plants. SpringerBriefs in Plant Science. ISBN-13: 978-3319090771.
Pandey A and Pandey GK (2014). The UNC-53 mediated interactome: Analysis of its Role in the Generation of the C. elegans Connectome. Springerbrief in Neuroscience. Book ISBN: 978-3-319-07827-4.
Pandey GK (2012, 2013) Stress mediated signaling in plants I&II. Plant Stress Vol. 6 &7, Special Issue, 2012, 2013; Global Science Books, ISSN 1749-0349, ISBN 978-4-907060-07-7.
EDITORIAL BOARD/ EDITOR
Editorial Board member, Scientific Reports, NPG
Academic Editor of PLoS One
Associate Editor, Plant Molecular Biology Reporter
Editorial Board member of Plant Signaling and Behavior
Editorial Board member of Current Biotechnology
Editorial Board member of Current Genomics
Editor, Physiology and Molecular Biology of Plant
Associate Editor, Dataset in Science
Associate Editor, Journal of Biomedical Science and Engineering
Editorial Board member, Journal of Molecular Biology and Molecular Imaging
PATENTS
Methods for enhancing a plant stress response.
Girdhar K. pandey, Kyeng-Nam Kim, Rajeev Gupta, and Sheng Luan
(United States Patent 7,250,555, granted in 2007).
Transgenic plants with enhanced chlorophyll content and salt tolerance.
Girdhar K. Pandey, Vanga Siva Reddy, Renu Deswal, Alok Bhattachaya and
Sudhir K.Sopory
(United States Patent 6,791,009, granted in 2004)
Web link: https://sites.google.com/site/gkplab/home
http://www.dpmb.ac.in/index.php?page=girdhar-pandey
http://scholar.google.co.in/citations?user=8QV6gGsAAAAJ&hl=en