Dan Ye

Publications

1. "Matrix polysaccharides affect preferred orientation of cellulose crystals in primary cell walls," Rongpipi, S.; Barnes, W.J.; Siemianowski, O.; Ye, D.; Del Mundo, J.T.; Duncombe, S.; Xin, X.; Zhu, C.; Toney, M.F.; Gu, Y.; Anderson, C.T.; Gomez, E.D.; Gomez, E.W., Cellulose, 2024, 31, 1397-1415.

2. "Grazing-incidence diffraction reveals cellulose and pectin organization in hydrated plant primary cell wall," Del Mundo, J.T.; Rongpipi, S.; Yang, H.; Ye, D.; Kiemle, S.N.; Moffit, S.L.; Troxel, C.L.; Toney, M.F.; Zhu, C.; Kubicki, J.D.; Cosgrove, D.J.; Gomez, E.W.; Gomez, E.D., Scientific Reports, 2023, 13: 5421.

3. "Preferred crystallographic orientation of cellulose in plant primary cell walls," *Ye, D.; *Rongpipi, S.; Kiemle, S.; Barnes, W.; Chaves, A.; Zhu, C.; Norman, V.; Liebman-Pelaez, A.; Hexemer, A.; Toney, M.; Roberts, A.; Anderson, C.; Cosgrove, D.; Gomez, E.W.; Gomez, E.D., Nature Communications, 2020, 11, 1420. Penn State News *authors contributed equally to the work.

4. "Aluminum oxide free-standing thin films to enable nitrogen edge soft X-ray scattering," Ye, D.; Rongpipi, S.; Litofsky, J.; Lee, Y.; Culp, T.; Yoo, S.H.; Jackson, T.N.; Wang, C.; Gomez, E.W.; Gomez, E.D., MRS Communications, 2019, 9, 224-228.

5. "Progress and opportunities in the characterization of cellulose - an important regulator of cell wall growth and mechanics," Rongpipi, S.; Ye, D.; Gomez, E.D.; Gomez, E.W., Frontiers in Plant Science, 2019, 9, 1894.

6. "Probing the internal microstructure of polyamide thin-film composite membranes using resonant soft X-ray scattering," Culp, T.; Ye, D.; Paul, M.; Roy, A.; Behr, M.; Jons, S.; Rosenberg, S.; Wang, C.; Gomez, E.W.; Kumar, M.; Gomez, E.D., ACS Macro Letters, 2018, 7, 927-932.

7. "Resonant soft X-ray scattering reveals cellulose microfibril spacing in plant primary cell walls," Ye, D.; Kiemle, S.; Rongpipi, S.; Wang, X.; Wang, C.; Cosgrove, D.J.; Gomez, E.W.; Gomez, E.D., Scientific Reports, 2018, 8, 12449. 

8. "Resonant soft X-ray scattering provides protein structure with chemical specificity," Ye, D.; Le, T.P.; Zhu, C.; Zwart, P.H.; Wang, C.; Gomez, E.D.; Gomez, E.W., Structure, 2018, 26, 1-9.

9. "Dehydration-induced physical strains of cellulose microfibrils in plant cell walls," Huang, S.; Makarem, M.; Kiemle, S.; Zheng, Y.; He, X.; Ye, D.; Gomez, E.W.; Gomez, E.D.; Cosgrove, D.J.; Kim, S.H., Carbohydrate Polymers, 2018, 197, 337-348.

10. "Creating cross-linked lamellar block copolymer supporting layers for biomimetic membranes," Lang, C.; Shen, Y-S.; LaNasa, J.A.; Ye, D.; Song, W.; Zimudzi, T.J.; Hickner, M.A.; Gomez, E.D.; Gomez, E.W.; Kumar, M.; Hickey, R.J., Faraday Discussions,  2018, 209, 179-191. 

11. "TGFβ1-induced expression of caldesmon mediates epithelial-mesenchymal transition," Nalluri, S.M.; O'Connor, J.W.; Virgi, G.A.; Stewart, S.E.; Ye, D.; Gomez, E.W., Cytoskeleton, 2018, 75 (5), 201-212.

Awards

Advanced Light Source Doctoral Fellowship in Residence (2016-2017)

China National Scholarship (2008)

ECUST Social Work A-class Prize (2008)

First-class Wilmar Hope Project Excellent College Students (2007)