Publications/Talks

Publications in international journals

[34] M. Beck,, E. Billoir, A. Meyer, F. Felten, P. Usseglio-Polatera and M. Danger. A database of West European headwater macroinvertebrate stoichiometric traits. 2021. Global Ecology and Biogeography, accepted.

[33] M. Beck, C. Mondy, M. Danger, E. Billoir and P. Usseglio-Polatera. Extending the Growth Rate Hypothesis to species development: Can stoichiometric traits help to explain the composition of macroinvertebrate communities? 2021. Oikos, accepted.

[32] V. Baillard, M. L. Delignette-Muller, C. Sulmon, A.-K. Bittebière, C. Mony, I. Couée, G. Gouesbet, S. Devin and E. Billoir. How does interspecific competition modify the response of grass plants against herbicide treatment? A hierarchical concentration-response approach. 2021. Science of the Total Environment, accepted.

[31] B. Alric, O. Dezerald, A. Meyer, E. Billoir, R. Coulaud, F. Larras, C. Mondy and P. Usseglio-Polatera. How diatom-, invertebrate- and fish-based diagnostic tools can support the ecological assessment of rivers in a multi-pressure context: temporal trends over the past two decades in France. 2021. Science of the Total Environment, 762, 143915. doi.org/10.1016/j.scitotenv.2020.143915

[30] V. Baillard, C. Sulmon, A.-K. Bittebière, C. Mony, I. Couée, G. Gouesbet, M. L. Delignette-Muller, S. Devin and E. Billoir. Effect of interspecific competition on species sensitivity distribution models: analysis of plant responses to chemical stress. 2020. Ecotoxicology and Environmental Safety. 200, 110722. doi: 10.1016/j.ecoenv.2020.110722

[29] F. Larras, E. Billoir, S. Scholz, M. Tarkka, T. Wubet, M. L. Delignette-Muller and M. Schmitt-Jansen. A multi-omics concentration-response framework uncovers novel understanding of triclosan effects in the chlorophyte Scenedesmus vacuolatus. 2020. Journal of Hazardous Materials. 397: 122727. doi: 10.1016/j.jhazmat.2020.122727

[28] V. Felten, H. Toumi, J.F. Masfaraud, E. Billoir, B.I. Camara, J.F. Férard. Microplastics enhance Daphnia magna sensitivity to the pyrethroid insecticide deltamethrin: effects on life history traits. 2020. Science of the Total Environment, 714, 136567. doi: 10.1016/j.scitotenv.2020.136567

[27] K. Sanchez-Thirion, M. Danger, A. Bec, E. Billoir, S. Labaude, T. Rigaud, J.-N. Beisel and V. Felten. High food quality increases Gammarus pulex (Crustacea: Amphipoda) infection by the acanthocephalan parasite Pomphorhynchus laevis. 2019. International Journal for Parasitology, 49(10), 805-817. doi: 10.1016/j.ijpara.2019.05.005

[26] R. Béranger, E. Billoir, J.R. Nuckols, J. Blain, M. Millet, M.L. Bayle, B. Combourieu, T. Philip, J. Schüz and B. Fervers. Agricultural and domestic pesticides in house dust from different agricultural areas in France. 2019. Environmental Science and Pollution Research, 26(19), 19632-19645. doi: 10.1007/s11356-019-05313-9

[25] E. Roubeau, C. Larue, S. Lorber, H. Gryta, E. Billoir, E. M. Gross and A. Elger. Does intraspecific variability matter in ecological risk assessment? Investigation of genotypic variations in three macrophyte species exposed to copper. 2019. Aquatic Toxicology. 211: 29-37. doi: 10.1016/j.aquatox.2019.03.012

[24] J. Arce-Funck, A. Bec, E. Billoir, F. Perrière, J. Leflaive, F. Guérold, V. Felten and M. Danger. High stoichiometric food quality increases moulting organism vulnerability to pollutant impacts: an experimental test with Gammarus fossarum (Crustacea: Amphipoda). 2018. Science of the Total Environment, 645, 1484-1495. doi: 10.1016/j.scitotenv.2018.07.227

[23] F. Larras, E. Billoir, V. Baillard, A. Siberchicot, S. Scholz, T. Wubet, M. Tarkka, M. Schmitt-Jansen, and M. L. Delignette-Muller. DRomics: A Turnkey Tool to Support the Use of the Dose–Response Framework for Omics Data in Ecological Risk Assessment. 2018 Environmental Science and Technology. 52: 14461-14468. doi: 10.1021/acs.est.8b04752

[22] C. Crenier, J. Arce-Funck, A. Bec, E. Billoir, F. Perrière, J. Leflaive, F. Guérold, V. Felten and M. Danger. Minor food sources can play a major role in secondary production in detritus-based ecosystems. 2017. Freshwater Biology, 62(7) : 1155-1167.

[21] F. Larras, R. Coulaud, E. Gautreau, E. Billoir, J. Rosebery and P. Usseglio-Polatera. Assessing anthropogenic pressures on streams: a random forest approach based on benthic diatom communities. 2017. Science of the Total Environment, 586 : 1101-1112.

[20] E. Billoir, V. Navratil and B. Blaise. Sample size calculation in metabolic phenotyping studies. 2015. Briefings in bioinformatics, 16(5) : 813-819 , doi: 10.1093/bib/bbu052.

[19] J. Cettier, M.L. Bayle, R. Béranger, E. Billoir, J.R. Nuckols, B. Combourieu and B. Fervers. Efficiency of wipe sampling on hard surfaces for pesticides and PCBs residues in dust. 2015. Science of the Total Environment, 505 : 11-21.

[18] N. Urien, E. Uher, E. Billoir, O. Geffard, L.C. Fechner and J.D. Lebrun. A biodynamic model predicting waterborne lead bioaccumulation in Gammarus pulex: influence of water chemistry and in situ validation. 2015. Environmental Pollution, 203 : 22-30.

[17] B. Blaise, C. Pontoizeau, E. Billoir and V. Navratil. SRV: an opensource toolbox to accelerate the recovery of metabolic biomarkers and correlations from metabolic phenotyping data sets. 2013. Bioinformatics, 29 (10): 1348-1349.

[16] D.R. Fox and E. Billoir. Time-dependent Species Sensitivity Distributions. 2013. Environmental Toxicology and Chemistry 32: 378–383.

[15] D.R. Fox, E. Billoir, S. Charles, M.L. Delignette-Muller and C. Lopes. What to do with NOECs / NOELs : prohibition or innovation? 2012. Integrated Environmental Assessment and Management, 8: 764–766.

[14] C. Forfait, S. Charles, E. Billoir and M.L. Delignette-Muller. Survival data analyses in ecotoxicology: Critical effect concentrations, methods and models. What should we use? 2012. Ecotoxicology, 21: 1072-1083.

[13] P.-A. Biron, S. Massarin, F. Alonzo, L. Garcia-Sanchez, S. Charles and E. Billoir. Population-level modeling to account for multigenerational effects of uranium in Daphnia magna. 2012. Environmental Science and Technology. 46: 1136-1143.

[12] E. Billoir, H. Delhaye, C. Forfait, B. Clément, G. Triffault-Bouchet, S. Charles and M.L. Delignette-Muller. Comparison of bioassays with different exposure time pattern: the added value of dynamic modelling in predictive ecotoxicology. 2012. Ecotoxicology and Environmental Safety, 75: 80-86.

[11] M.L. Delignette-Muller, C. Forfait, E. Billoir and S. Charles. A new perspective about the Dunnett procedure: filling the gap between LOEC/NOEC and ECx concepts. 2011. Environmental Toxicology and Chemistry, 30: 2888-2891.

[10] L. van Oudenhove, E. Billoir, R. Boulay, X. Cerda and C. Bernstein. Temperature limits trail following behaviour through pheromone decay in ants. 2011. Natürwissenschaften, 98: 1009-1017.

[9] D.R. Fox and E. Billoir. Individual versus population effects in concentration-response modeling. 2011. Integrated Environmental Assessment and Management, 7: 501-502.

[8] E. Billoir, H. Delhaye, B. Clément, M.L. Delignette-Muller and S. Charles. Bayesian modelling of daphnid responses to time-varying cadmium concentrations in laboratory aquatic microcosms. 2011. Ecotoxicology and Environmental Safety, 74: 693-702.

[7] M. Cornu, E. Billoir, H. Bergis, A. Beaufort and V. Zuliani. Modeling microbial competition in food: application to the behavior of Listeria monocytogenes and lactic acid flora in pork meat products. 2011. Food Microbiology, 28: 639-647.

[6] E. Billoir, J.-B. Denis, N. Commeau, M. Cornu, and V. Zuliani. Probabilistic modeling of the fate of Listeria monocytogenes in diced bacon during the manufacturing process. 2011. Risk Analysis, 31(2): 237-254.

[5] V. Ducrot, E. Billoir, A. Péry, J. Garric and S. Charles. From individual to population level effects of toxicants in the tubicifid Branchiura sowerbyi using threshold effect models in a Bayesian framework. 2010. Environmental Science and Technology 44(9): 3566-3571.

[4] E. Billoir, A. da Silva Ferrao-Filho, M.L. Delignette-Muller and S. Charles. DEBtox theory and matrix population models as helpful tools in understanding the toxic cyanobacteria-zooplankton interaction. 2009. Journal of Theoretical Biology 258: 380-388.

[3] E. Billoir, M.L. Delignette-Muller, A. Péry and S. Charles. A Bayesian approach to analyzing ecotoxicological data. 2008. Environmental Science and Technology 42(23): 8978-8984.

[2] E. Billoir, M.L. Delignette-Muller, A. Péry, O. Geffard and S. Charles. Statistical cautions when estimating DEBtox parameters. 2008. Journal of Theoretical Biology 254: 55-64.

[1] E. Billoir, A. Péry and S. Charles. Integrating the lethal and sublethal effects of toxic compounds into the population dynamics of Daphnia magna: a combination of the DEBtox and matrix population models. 2007. Ecological Modelling 203(3-4): 204-214.

Book Chapter

[1] S. Charles, E. Billoir, C. Lopes et A. Chaumot. Matrix population models as relevant tools in ecotoxicology. 2009. In J. Devillers ed., Ecotoxicology Modeling, Springer.

Oral communications in international conferences (speaker underlined)

R. Béranger, E. Billoir, J. Nuckols, J. Blain, ML Bayle, J. Schüz, B Combourieu, B. Fervers. SIGEXPO project: pesticides exposure level in the French context: burden of environmental exposures and domestic habits. Environmental and Health - Bridging South, North, East and West, Basel, Switzerland, 2013.

D.R. Fox, E. Billoir, S. Charles and M.L. Delignette-Muller. Statistical ecotoxicology - bright lines and dark alleyways. SETAC World Congress, Berlin, Germany, 2012.

M.L. Delignette-Muller, C. Forfait, L. Mariani, E. Billoir and S. Charles. Statistical evaluation of statistical designs for modelling concentration-response functions in ecotoxicology. SETAC World Congress, Berlin, Germany, 2012.

S. Charles, C. Lopes, E. Billoir, D. Fox, C. Forfait, L. Mariani and M.L. Delignette-Muller. Estimation of critical effect concentration: when choosing the right stochastic part matters. SETAC World Congress, Berlin, Germany, 2012.

E. Billoir, H. Delhaye, C. Forfait, B. Clément, S. Charles and M.L. Delignette-Muller. Comparison of bioassays with different exposure patterns: the predictive potential of mechanistic modelling. SETAC Congress, Milan, Italy, 2011.

C. Forfait, M.L. Delignette-Muller, E. Billoir and S. Charles. A review of methods for analysing standard data: is there a place for non-standard methods? SETAC Congress, Milan, Italy, 2011.

E. Billoir and D.R. Fox. Time-dependent SSDs. EnviroTox, Darwin, Australia, 2011.

S. Charles, E. Billoir, C.D. Forfait and M.L. Delignette-Muller. Use of Bayesian inference in ecotoxicology. NCSC Congress, Lyon, France, 2010.

E. Billoir, H. Delhaye, B. Clément, M. L. Delignette-Muller and S. Charles. Modelling of daphnids responses to cadmium in aquatic microcosms. CMPD3 Congress, Bordeaux, France, 2010.

E. Billoir, S. Charles and V. Ducrot. From individual to population level effects of toxicants in the tubicifid Branchiura sowerbyi using threshold effect models in a Bayesian framework. CMPD3 Congress, Bordeaux, France, 2010.

E. Billoir, J.-B. Denis, N. Commeau, M. Cornu, and V. Zuliani. Probabilistic modeling of Listeria monocytogenes behaviour in diced bacon along the manufacture process chain. ICPMF Congress, Washington DC, United States, 2009.

M. Cornu, E. Billoir, H. Bergis, A. Beaufort and V. Zuliani. Modelling microbial competition in foods. Application to the behaviour of Listeria monocytogenes and lactic acid flora in diced bacon. ICPMF Congress, Washington DC, United States, 2009.

S. Charles, E. Billoir, C. Lopes, M. Teixeira-Alves and M.L. Delignette-Muller. New insights in analysing ecotoxicological data using DEBtox and matrix population models: the benefits offered by bayesian inference. ISTA Congress, Metz, France, 2009.

C. Lopes, M. Teixeira-Alves, E. Billoir, J. Garric and S. Charles. A combination of DEBtox and Leslie models to quantify ivermectin impacts on cladoceran species. DEB Symposium, Brest, France, 2009.

E. Billoir, A. da Silva Ferrao-Filho, M.L. Delignette-Muller and S. Charles. The ecotoxicology of the zooplankton-cyanobacteria interaction. CMPD2 Congress, Campinas, Brazil, 2007.

E. Billoir, M.L. Delignette-Muller, A. Péry and S. Charles. On the use of bayesian inference to estimate DEBtox parameters. SETAC Congress, Porto, Portugal, 2007.

S. Charles, E. Billoir and A. Péry. Could we reduce toxicity tests duration? QSAR Congress, Lyon, France, 2006.

E. Billoir, A. Péry and S. Charles. Integrating both lethal and sublethal effects of toxic compounds into the population dynamics of Daphnia magna. DEB Workshop, Marseille, France, 2005.

Posters in international conferences

E. Billoir, D.R. Fox, M.L. Delignette-Muller and S. Charles. An interfaced R-package to fit SSDs. SETAC World Congress, Berlin, Germany, 2012.

E. Billoir and D.R. Fox. Time-dependent SSDs. SETAC Congress, Milan, Italy, 2011.

M.L. Delignette-Muller, C. Forfait, E. Billoir and S. Charles. Another interpretation of classical multiple comparison procedures used in ecotoxicology. SETAC Congress, Milan, Italy, 2011.

P.-A. Biron, E. Billoir, S. Massarin, F. Alonzo, and S. Charles. Effects of uranium in Daphnia magna exposed over three successive generations: extrapolation of DEBtox analyses to the population level. DEB Symposium, Lisbon, Portugal, 2011.

E. Billoir, V. Ducrot and S. Charles. Threshold Effect modelling: A Bayesian approach to assess and extrapolate parameter uncertainty in populations of benthic worms exposed to polluted sediments. SETAC Congress, Seville, Spain, 2010.

C.D. Forfait, E. Billoir, M.L. Delignette-Muller, R. Manar and S. Charles. Survival data analyses in ecotoxicology. SETAC Congress, Seville, Spain, 2010.

F. Alonzo, S. Massarin, E. Billoir, P.-A. Biron, S. Charles and J. Garnier-Laplace. Modelling individual and population dynamics of Daphnia magna exposed to uranium with multigenerational effects on physiology and life history. SETAC Congress, Seville, Spain, 2010.

S. Charles, E. Billoir, C.D. Forfait, A. da Silva Ferrao-Filho, C. Lopes, J. Garric and M.L. Delignette-Muller. DEBtox and matrix population models coupled with Bayesian inference to analyse ecotoxicological data. SETAC Congress, Seville, Spain, 2010.

N. Commeau, E. Parent, E. Billoir, V. Zuliani and M. Cornu. Sampling plan optimisation: application to French diced bacon industry and Listeria monocytogenes. ICPMF Congress, Washington DC, United States, 2009.

E. Billoir, M.L. Delignette-Muller, A. Péry and S. Charles. Improving the analysis of routine ecotoxicological data. SETAC Congress, Sydney, Australia, 2008.

E. Billoir, A. da Silva Ferrao-Filho, M.L. Delignette-Muller and S. Charles. DEBtox theory and matrix population models as helpful tools in understanding the toxic cyanobacteria-zooplankton interaction. SETAC Congress, Sydney, Australia, 2008.

E. Billoir, M.L. Delignette-Muller, A. Péry and S. Charles. On the use of bayesian inference to improve routine ecotoxicological data analysis. IBC Congress, Dublin, Ireland, 2008.

E. Billoir, A. Péry and S. Charles. Integrating the lethal and sublethal effects of toxic compounds into the population dynamics of Daphnia magna: a combination of the DEBtox and matrix population models. SETAC Congress, The Hague, The Netherland, 2006.

Invited seminars

E. Billoir. Comparison of daphnid responses to Cd under different exposure time-courses : the added value of dynamic modelling. Department System Analysis, Integrated Assessment and Modelling, Eawag, Dübendorf, Switzerland, 2015.

E. Billoir. Bayesian modelling of daphnid responses to various cadmium exposure patterns in laboratory aquatic microcosms. Statistics group, Department of Life Sciences, University of Copenhagen, Denmark, 2011.

E. Billoir. Modélisation des effets du cadmium sur Daphnia magna en microcosme. ENTPE LSE, Vaulx-en-Velin, France, 2010.

E. Billoir. Modèles DEBtox, modèles matriciels de population et inférence bayésienne pour l'analyse de données écotoxicologiques. IRSN LRE/LME, Cadarache, France, 2010.

E. Billoir. Modélisation dynamique et inférence bayésienne pour l'analyse de données écotoxicologiques. INRA MIA, Jouy en Josas, France, 2009.

E. Billoir, M.L. Delignette-Muller, A. Péry and S. Charles. Analyse de données écotoxicologiques par inférence Bayésienne. AppliBUGS meeting, Paris, France, 2007.

E. Billoir, M.L. Delignette-Muller, A. Péry and S. Charles. On the use of Bayesian inference to estimate DEBtox parameters. SéMoVi, Lyon, France, 2007.

E. Billoir, A. da Silva Ferrao-Filho and S. Charles. Dynamic Energy Budgets Theory applied to ecotoxicology. Fiocruz, Rio de Janeiro, Brazil, 2006.