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This is the documentation wiki for UCSF DOCK 3.7, which is available at:
http://dock.compbio.ucsf.edu/DOCK3.7/
The main DOCK3.7 paper, please read & cite: Coleman, Carchia, Sterling, Irwin & Shoichet, PLOS ONE 2013. Additional citations
Protein Target Preparation (Adding Static Waters to the Protein Structure) (Flexible Docking)
ZINC Subset DB2 file locations
Auto-DUD-E Test Set (external site) Github mirror of Auto-DUD-E
You may also be interested in the Teach-Discover-Treat 2014 tutorials, which used DOCK3.7 in a practical project for drug discovery and go through examples step-by-step. See the tutorials by Coleman & Karpiak: http://www.tdtproject.org/2014-tutorials.html, https://github.com/ryancoleman/tdt2014-part2 & https://github.com/joelkarpiak/tdt_part3.
All documentation on this wiki is under the following license:
This work is licensed under the Creative Commons Attribution-ShareAlike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/3.0/.
DOCK3.7 Documentation by Ryan G. Coleman is licensed under a Creative Commons Attribution-ShareAlike 3.0 Unported License.
Based on a work at https://sites.google.com/site/dock37wiki/.
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