Publications

(Note: Some of the items on this page might be copyrighted material!)

Molecular Structure Prediction

  • Bashir Sadjad, Zsolt Zsoldos, Toward a Robust Search Method for the Protein-Drug Docking Problem, IEEE/ACM Transactions on Computational Biology and Bioinformatics, Vol. 8, pp 1120--1133, 2011. [PDF File]
  • Darryl Reid, Bashir S. Sadjad, Zsolt Zsoldos, Aniko Simon LASSO -- ligand activity by surface similarity order: a new tool for ligand based virtual screening Journal of Computer-Aided Molecular Design Vol. 22-6, pp. 479--487, 2008. [PDF File]

  • Z. Zsoldos and D. Reid and A. Simon and B. S. Sadjad and A. P. Johnson, eHiTS: A new fast, exhaustive flexible ligand docking system Journal of Molecular Graphics and Modeling Vol. 26-1, pp. 198--212, 2007. [PDF File]

  • Z. Zsoldos and D. Reid and A. Simon and B. S. Sadjad and A. P. Johnson, eHiTS: an innovative approach to the docking and scoring function problems Current Protein and Peptide Science, Vol. 7, pp 421--435, 2006. [PDF File]

Algorithms and Combinatorics

  • S. Akbari, V. S. Mirrokni, B. S. Sadjad, Some Relations between Choosability and Uniquely List Colorability, Journal of Combinatorial Theory Ser. B, Vol. 96 No. 4, pp 577--583, 2006. [ PDF File ]

  • T. M. Chan and B. S. Sadjad, Geometric Optimization Problems over Sliding Windows International Journal of Computational Geometry and Applications, 16:145-157, 2006 Vol. 16, pp 145--157, 2006. [ PDF File ]

  • T. M. Chan and B. S. Sadjad, Geometric Optimization Problems over Sliding Windows Proceedings 15th International Symposium on Algorithms and Computation (ISAAC), Lecture Notes in Computer Science, vol. 3341, pages 246-258, 2004. [conference version of the previous item]
    This paper was selected as the best student paper in ISAAC 2004.

  • B. S. Sadjad and M. Mirzazadeh, Analysis of Distance Based Indexing Methods for Similarity Search Proceedings of the 17th Canadian Conference on Electrical and Computer Engineering Niagara Falls, Canada, 2004.

  • C. Quimper, P. van Beek, A. Lopez-Ortiz, A. Golynski, and S. B. Sadjad, An Efficient Bounds Consistency Algorithm for the Global Cardinality Constraint. Proceedings of the 9th International Conference on Principles and Practice of Constraint Programming, Kinsale, Ireland, Sep. 2003.

  • Y. Ganjali, M. Ghebleh, H. Hajiabohasan, M. Mirzazadeh, B. S. Sadjad Uniquely 2-List Colorable Graphs, Discrete Applied Mathematics Vol. 119 Issue 3, pp 217-225, 2002. [ PDF File ]

  • S. Akbari, V. S. Mirrokni, B. S. Sadjad, Uniquely Vertex Colorable Graphs with Minimum Possible Edges, Journal of Combinatorial Theory Ser. B, Vol. 82 No. 2, pp 316--318, 2001. [ PDF File ]

  • S. B. Sadjad, M. Ghodsi, S. V. Mirrokni, Algorithmic Methods in Graph List-Coloring Proceedings of the first conference on Graphs, Combinatorics, Computational Algorithms and Applications, Amir Kabir Univ. of Tech., Feb, 2001 (in persian).

Robotics and Image Processing

  • M. Jamzad, E. Chiniforooshan, B. S. Sadjad, Object Detection in Changing Environment of Middle Size RoboCup and Some Applications, Proceedings of the IEEE Internatinal Symposium on Intelligent Control, pp 807-810, 2002.

  • M. Jamzad, B. S. Sadjad, V. S. Mirrokni, M. Kazemi, H. Chitsaz, A. Heydarnoori, M.T. Hajiaghai, E. Chiniforooshan, A Fast Vision System for Middle Size Robots in RoboCup, Lecture Notes in Computer Science Vol. 2377, pp 71-80, 2002. [ PDF File ]
    This paper was selected as the best Engineering Challenge in RoboCup 2001.

  • M. Jamzad, H. Chitsaz, A. Foroughnassirai, R. Ghorbani, M. Kazemi, V. S. Mirrokni, B. S. Sadjad, Basic Requirements for a Teamwork in Middle Size RoboCup, Lecture Notes in Computer Science , Vol. 2377, pp 621-626, 2002.

  • M. Jamzad, A. Foroughnassiraei, E. Chiniforooshan, M. Kazemi, R. Ghorbani, H. Chitsaz, S. B. Sadjad, and F. Mobasser, Arvand: A Soccer Player Robot, AI Magazine, Vol. 21, No. 3, Fall 2000, pp 47-51. [PS File]

  • M. Jamzad, A. Foroughnassiraei, E. Chiniforooshan, M. Kazemi, R. Ghorbani, M. Kazemi, H. Chitsaz, F. Mobasser, and S. B. Sadjad Middle Size Soccer Robots: Arvand, in M. Veloso, E. Pagello, and H. Kitano, eds. RoboCup 99: Robot Soccer World Cup III, Springer-Verlag, pp. 61-73, 2000. [ PDF File ]

  • M. Jamzad, A. Foroughnassiraei, E. Chiniforooshan, R. Ghorbani, M. Kazemi, H. Chitsaz, F. Mobasser, and S. B. Sadjad, Design and Construction of a Soccer Player Robot Arvand, in M. Veloso, E. Pagello, and H. Kitano, eds. RoboCup 99: Robot Soccer World Cup III, Springer-Verlag, pp. 745-749, 2000.

Thesis

  • Ph.D. Thesis
    B. Sadjad, Robust Search Methods for Rational Drug Design Applications, University of Waterloo, Waterloo, Canada [available here].
    Here is my presentation for the defense session.
  • Master's Thesis
    B. Sadjad, Geometric Optimization Problems over Sliding Windows and Similarity Search in Metric Spaces, University of Waterloo, Waterloo, Canada [available here].

  • B. Sc. Thesis
    S. V. Mirrokni, S. B. Sadjad, Design and Implementation of Image Processing and Software Control Algorithms for Middle Size Soccer Robot ARVAND, Sharif University of Technology, Theran, Iran (in persian, available here).

Others

  • Some articles in The Way of Olympiad Iranian journal.


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