SELECTED PUBLICATIONS
Yan Q., Fang Z, Chen W. KMgene: a unified R package for gene-based association analysis for complex traits. Accepted by Bioinformatics.
Chang LC, Li B, Fang Z, Vrieze S, McGue M, Lacono WG, Tseng GC, Chen W. A computational method for genotype calling and haplotyping for family-based sequence data. BMC Bioinformatics 2016. 16;17:37
Wang T, Zhao R, Ding Y, Fang Z, Sun Z, MacDonald ML, Sweet R, Wang J, Chen W. Fast GGM: An efficient algorithm for the inference of Gaussian graphical model. Plos Computational Biology 2016. 12 (2) , art. no. e1004755 , pp. 16.
Liu S, Tsai WH, Ding Y, Chen R, Fang Z, Huo Z, Kim S, Ma T, Chang TY, 2015. Comprehensive evaluation of fusion transcript detection algorithms and a meta-caller to combine top performing methods in paired-end RNA-seq data. Nucleic Acids Research, p.gkv1234.
Liu X, Rohrer W, Luo A, Fang Z, He TH, Xie W. Doctor-patient communication skills training in mainland China: A systematic review of literature. Patient Education and Counseling 2015; 98(1): 3-14
Hui D; Fang Z; Lin J; Duan Q; Li Y; Hu M; Chen W. LAIT: a local ancestry inference toolkit. BMC Genetics (2017) 18:83
Priedigkeit NM, Watters RJ, Lucas PC, Basudan A, Bhargava R, Horne W, Kolls JK, Fang Z, Rosenzweig MQ, Brufsky AM, Weiss KR, Oesterreich R, Lee AV. Exome-Capture RNA-Sequencing Of Decade-Old Breast Cancers And Matched Decalcified Bone Metastases Identifies Clinically Actionable Targets. JCI Insight. 2017;2(17):703.
And six other peer-reviewed publications.
MANUSCRIPTS UNDER REVIEW
Fang Z, Ma T, Tang G, Zhu L, Yan Q, Wang T, Celedon JC, Chen W, Tseng GC. Bayesian integrative model for multi-omics data with missingness. Under review at Bioinformatics.
Ma T.*, Huo Z.*, Kuo A.*, Zeng X., Zhu L., Fang Z, Wang L, Lin C, Rahman T., Liu S, Park Y, Kim S, Li J, Chang L, Song C, Tseng GC. MetaOmics: Comprehensive Analysis Pipeline and Browser-based Software Suite for Transcriptomic Meta-Analysis. Under review at Bioinformatics.