Software & Resources

Software

writing and Editing of sbml models

  1. Copasi, a GUI Software that supports sbml
  2. SimBiology, a matlab toolbox to create models and export to sbml
  3. SBToolbox2, another matlab toolbox for systems biology
  4. IQM Tools, next version of SBToolbox2

Visualisation

  1. iVUN, a systems biology network visualisation tool

Web-based tools

  1. SBtab, an extensible table format that can be converted into sbml online