Publications

2023

Carton F, Casarella S, Di Francesco D, Zanella E, D’urso A, Di Nunno L, Fusaro L, Cotella D, Prat M, Follenzi A, Boccafoschi F (2023). Cardiac Differentiation Promotes Focal Adhesions Assembly through Vinculin Recruitment. Int. J. Mol. Sci. 24, 2444. https://doi.org/10.3390/ijms24032444

2021

Espinoza S, Bon C, Valentini P, Pierattini B, Tettey Matey A, Damiani D, Pulcrano S, Sanges R, Persichetti F, Takahashi H, Carninci P, Santoro C, Cotella D, Gustincich S (2021). SINEUPs: a novel toolbox for RNA therapeutics. Essays Biochem EBC20200114; doi: 10.1042/EBC20200114

Carton F, Di Francesco D, Fusaro L, Zanella E, Apostolo C, Oltolina F, Cotella D, Prat M, Boccafoschi F (2021). Myogenic potential of extracellular matrix derived from decellularized bovine pericardium. Int J Mol Sci 22, 9406. doi:10.3390/ijms22179406. https://www.mdpi.com/1422-0067/22/17/9406

2020

Giraudo MV, Di Francesco D, Catoira MC, Cotella D, Fusaro L, Boccafoschi F (2020). Angiogenic Potential in Biological Hydrogels. Biomedicines 8(10):436. doi: 10.3390/biomedicines8100436. https://www.mdpi.com/2227-9059/8/10/436

Puccio S, Grillo G, Consiglio A, Soluri MF, Sblattero D, Cotella D, Santoro C, Liuni S, De Bellis G, Lugli E, Peano C, Licciulli F (2020). InteractomeSeq: a web server for the identification and profiling of domains and epitopes from Phage Display and Next Generation Sequencing data. Nucleic Acids Res 48, W200-207. doi: 10.1093/nar/gkaa363. https://academic.oup.com/nar/article/48/W1/W200/5836767

2019

Gagliardi M, Cotella D, Santoro C, Corà D, Barlev N, Piacentini M, Corazzari M (2019). Aldo-keto reductases protect metastatic melanoma from ER stress-independent ferroptosis. Cell Death Dis 10(12):902. doi: 10.1038/s41419-019-2143-7.

Bon C, Luffarelli R, Russo R, Fortuni S, Pierattini B, Santulli C, Fimiani C, Persichetti F, Cotella D, Mallamaci A, Santoro C, Carninci P, Espinoza S, Testi R, Zucchelli S, Condò I, Gustincich S. SINEUP non-coding RNAs rescue defective frataxin expression and activity in a cellular model of Friedreich’s Ataxia. Nucleic Acids Res 47(20):10728-10743. doi: 10.1093/nar/gkz798. https://academic.oup.com/nar/article/47/20/10728/5580914

Fasolo F, Patrucco L, Volpe M, Bon C, Peano C, Mignone F, Carninci P, Persichetti F, Santoro C, Zucchelli S, Sblattero D, Sanges R, Cotella D*, Gustincich S*. The RNA-binding protein ILF3 binds to transposable elements sequences in SINEUP lncRNAs. FASEB J, DOI: 10.1096/fj.201901618RR. https://faseb.onlinelibrary.wiley.com/doi/10.1096/fj.201901618RR

Sutti S, Bruzzì S, Heymann F,Liepelt A, Krenkel O, Toscani A, Ramavath NN, Cotella D, Albano E, Tacke F (2019). CX3CR1 Mediates the Development of Monocyte-Derived Dendritic Cells during Hepatic Inflammation. Cells, 8(9), 1099; https://doi.org/10.3390/cells8091099

Antony F, Deantonio C, Cotella D, Soluri MF, Tarasiuk O, Raspagliesi F, Adorni F, Piazza S, Ciani Y, Santoro S, Macor P, Mezzanzanica D,Sblattero D. High-throughput assessment of the antibody profile in ovarian cancer ascitic fluids. OncoImmunology, DOI: 10.1080/2162402X.2019.1614856. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6685609/

Soluri MF, Boccafoschi F, Cotella D, Moro L, Forestieri G, Autiero I, Cavallo L, Oliva R, Griffin M, Wang Z, Santoro C, Sblattero D. Mapping the minimum domain of the fibronectin binding site on transglutaminase 2 (TG2) and its importance in mediating signaling, adhesion, and migration in TG2-expressing cells. FASEB J. 2019 Feb;33(2):2327-2342. doi: 10.1096/fj.201800054RRR. Epub 2018 Oct 4.

2018

Giglio P, Gagliardi M, Bernardini R, Mattei M, Cotella D, Santoro C, Piacentini M, Corazzari M. Ecto-Calreticulin is essential for an efficient immunogenic cell death stimulation in mouse melanoma. Genes Immun. doi: 10.1038/s41435-018-0047-7. [Epub ahead of print] PubMed PMID: 30282994.

Giglio P, Gagliardi M, Tumino N, Antunes F, Smaili S, Cotella D, Santoro C, Bernardini R, Mattei M, Piacentini M, Corazzari M (2018). PKR and GCN2 stress kinases promote an ER stress-independent eIF2α phosphorylation responsible for calreticulin exposure in melanoma cells. Oncoimmunology. 7(8):e1466765. doi: 10.1080/2162402X.2018.1466765. eCollection 2018

Corrado L, Tiloca C, Locci C, Bagarotti A, Hamzeiy H, Colombrita C, De Marchi F, Barizzone N, Cotella D, Ticozzi N, Mazzini L, A. Basak N, Ratti A, Silani V D’Alfonso S (2018) Characterization of the c9orf72 gc-rich low complexity sequence in two cohorts of italian and turkish als cases. Amyotroph Lateral Scler Frontotemporal Degener. 19(5-6):426-431. doi: 10.1080/21678421.2018.1440407. Epub 2018 Feb 28. PMID:29490503

Takahashi H, Kozhuharova A, Sharma H, Hirose M, Ohyama T, Fasolo F, Yamazaki T, Cotella D, Santoro C, Zucchelli S, Gustincich S, Carninci P. Identification of functional features of synthetic SINEUPs, antisense lncRNAs that specifically enhance protein translation. PLoS ONE 13(2):e0183229. doi: 10.1371/journal.pone.0183229.

2016

Zucchelli S, Patrucco L, Persichetti F, Gustincich S, Cotella D (2016) Engineering translation in mammalian cell factories to increase protein yield: the unexpected use of long non-coding SINEUP RNAs. Comput Struct Biotechnol J. 14:404-410. doi: 10.1016/j.csbj.2016.10.004. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5107644/

2015

Patrucco L, Peano C, Chiesa A, Guida F, Luisi I, Boria I, Mignone F, De Bellis G, Zucchelli S, Gustincich S, Santoro C, Sblattero D, Cotella D. (2015) Identification of novel proteins binding the AU-rich element of α-prothymosin mRNA through the selection of open reading frames (RIDome). RNA Biol. 12(12):1289-300. doi: 10.1080/15476286.2015.1107702. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4829324/

Zucchelli S, Cotella D, Takahashi H, Carrieri C, Cimatti L, Fasolo F, Jones MH, Sblattero D, Sanges R, Santoro C, Persichetti F, Carninci P, Gustincich S. (2015) SINEUPs: A new class of natural and synthetic antisense long non-coding RNAs that activate translation. RNA Biol. 12(8):771-9. doi: 10.1080/15476286.2015.1060395. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4615742/

Patrucco L, Chiesa A, Soluri MF, Fasolo F, Takahashi H, Carninci P, Zucchelli S, Santoro C, Gustincich S, Sblattero D, Cotella D (2015). Engineering mammalian cell factories with SINEUP noncoding RNAs to improve translation of secreted proteins. Gene 569 (2):287-93. doi: 10.1016/j.gene.2015.05.070. https://www.sciencedirect.com/science/article/pii/S0378111915007027?via%3Dihub

Zucchelli S, Fasolo F, Russo R, Cimatti L, Patrucco L, Takahashi H, Jones MH, Santoro C, Sblattero D, Cotella D, Persichetti F, Carninci P, Gustincich S (2015). SINEUPs are modular antisense long non-coding RNAs that increase synthesis of target proteins in cells. Front Cell Neurosci. 9:174. doi: 10.3389/fncel.2015.00174. https://www.frontiersin.org/articles/10.3389/fncel.2015.00174/full

Turnow K, Metzner K, Cotella D, Morales MJ, Schaefer M, Christ T, Ravens U, Wettwer E, Kämmerer S (2015). Interaction of DPP10a with Kv4.3 channel complex results in a sustained current component of human transient outward current Ito. Basic Res Cardiol. 110 (2):5. doi: 10.1007/s00395-014-0457-2

2014

Deantonio C, Sedini V, Cesaro P, Quasso F, Cotella D, Persichetti F, Santoro C, Sblattero D (2014). An Air-Well sparging minifermenter system for high-throughput protein production. Microb Cell Fact. 13:132. doi: 10.1186/s12934-014-0132-1.

Deantonio C, Cotella D, Macor P, Santoro C, Sblattero D (2014). Phage display technology for human monoclonal antibodies. Methods Mol Biol. 1060:277-95 doi: 10.1007/978-1-62703-586-6_14.

2013

Szuts V, Ménesi D, Varga-Orvos Z, Zvara Á, Houshmand N, Bitay M, Bogáts G, Virág L, Baczkó I, Szalontai B, Geramipoor A, Cotella D, Wettwer E, Ravens U, Deák F, Puskás LG, Papp JG, Kiss I, Varró A, Jost N (2013). Altered expression of genes for Kir ion channels in dilated cardiomyopathy. Can J Physiol Pharmacol. 91(8):648-56. doi: 10.1139/cjpp-2012-0413

Radicke S, Riedel T, Cotella D, Turnow K, Ravens U, Schaefer M, Wettwer E (2013).Accessory subunits alter the temperature sensitivity of Kv4.3 channel complexes. J Mol Cell Cardiol. 56:8-18. doi: 10.1016/j.yjmcc.2012.12.017.

Cotella D, Hernandez-Enriquez B, Duan Z, Wu X, Gazula VR, Brown MR, Kaczmarek LK, Sesti F (2013). An evolutionarily conserved mode of modulation of Shaw-like K⁺ channels. FASEB J. 27(4):1381-93. doi: 10.1096/fj.12-222778

2012

Cotella D*, Hernandez-Enriquez B*, Wu X, Li R, Pan Z, Leveille J, Link CD, Oddo S, Sesti F (2012). Toxic role of K+ channel oxidation in mammalian brain. J Neurosci. 32(12):4133-44. doi: 10.1523/JNEUROSCI.6153-11.2012

Cotella D, Radicke S, Cipriani V, Cavaletto M, Merlin S, Follenzi A, Ravens U, Wettwer E, Santoro C, Sblattero D (2012). N-glycosylation of the mammalian dipeptidyl aminopeptidase-like protein 10 (DPP10) regulates trafficking and interaction with Kv4 channels. Int J Biochem Cell Biol. 44(6):876-85. doi: 10.1016/j.biocel.2012.02.011