Schedule
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Basic Unix for Bioinformatics 2024
Embedded Files
Tentative schedule
Tentative schedule
Day
Day
Date
Date
Time
Time
Content
Content
Lecturer
Lecturer
1
Oct 17, 2024
8:30 - 9:00
9:00 - 12:00
Registration
Introduction to Unix or Linux
Windows Subsystem for Linux (WSL) installation
Unix file system
Basic command lines
KK
12:00 - 13:00
Lunch break
13:00 - 16:00
Files and directories manipulation
The Vi/Vim text editor
File permission
Check disk space
Basic command for displaying bioinformatics files
KK
2
Oct 18, 2024
9:00 - 12:00
Retrieve Bioinformatics files from World Wide Web
Compress and decompress file
Bioinformatics file manipulation with real-world examples
PU
12:00 - 13:00
Lunch break
13:00 - 16:00
Shell script:
Syntax, Comments and Variables
Control statements - conditionals
Control statements - loops
Bioinformatics software installation via Anaconda
Running bioinformatic software using shell scripts
PU
* Workshop will be conducted in English
* Workshop will be conducted in English
KK: Asst.Prof.Dr. Kanthida Kusonmano
PU: Dr. Pichahpuk Uthaipaisanwong
KK: Asst.Prof.Dr. Kanthida Kusonmano
PU: Dr. Pichahpuk Uthaipaisanwong
Note: The schedule and content may be adjusted for appropriateness without prior notice.
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