Unit 3: Biochemistry

Unit 3 Lectures

Reading Quiz Chapter 2 (see notes below) 

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Ch. 2 Reading Guide Answer Key

POWERPOINT: Unit 3 preview (basic chemistry/protein structure)

• Video: Le Chatelier's Principle (Cengage)

POWERPOINT: Ch. 3 (Water)

• Animation: Properties of water (~9 min)

• Animation: Carbonic acid equilibrium (2:23)

Molecular Modeling Activities (Isomers)

LAB #5: Properties of Water and Stats

• Standard Error PowerPoint Slides (coming soon)

• Mini-lab report info:

  • General format info

  • Lab report template (that you can type into)

  • Sample Lab report (for Hardy-Weinberg Lab)

  • Water Lab Rubric (fill this out and hand it in with your lab writeup)

• Bozeman Science Standard Error Review

LAB#6: pFluoroGreen Transformation (Edvotek)

• PowerPoint

• Bozeman Science Lab Overview (Lab 6 - Molecular Biology) - not the same one we did

• Animation - why we use heat shock and Calcium Chloride

• Online video walkthrough of a transformation lab (not the same one we did)

• Simulation of a Transformation Lab (if you do this, choose level 1 - it's a little difficult)

LAB#7: Protein Structure

• www.rcsb.org

• Amino acid structure chart

• Jmol tutorial about Hemoglobin and disease (extra resource)

POWERPOINT: Ch. 4 and 5 (Biochemistry)

POWERPOINT: Ch. 8 (Metabolism)

• Motor proteins

• Energy of Reactions Worksheet (table) ANSWER KEY

• AP Biology Enzyme Primer:

  • Worksheet

  • Diagrams

• Endergonic/Exergonic Reactions Practice

  • Endergonic/Exergonic Reactions Practice (ANSWERS)

• Animation: Enzymes - Allosteric Regulation

  • Google Drive Allosteric Regulation Animation 

• Animation: Enzymes - Feedback Inhibition

• More info about competitive and noncompetitive inhibitors effect on Vmax and Km

Enzyme Activity (Foam Model Kit)

• Gleevac inhibits cancer-causing kinase (3:30)

• Gleevac-Resistant form of Kinase BCR-ABL (2:10)

LAB #8: Enzyme Lab (iTune Device)

• PowerPoint Slides

• iTune Lab Data Table (all 3 classes)

• Graph interpretation handout

• More information about synthetic biology (video series)

Enzyme Inhibition Graph practice (Km)

POWERPOINT: Ch. 8 Extension (Gleevec)

Catecholase problem set

• Catecholase problem set answer key

Biochem PRACTICE Questions

• Biochem PRACTICE Questions (ANSWERS)

Material below this line was not used this year

• Practice Packet #1 (sample problem from class)
• Practice Problems #2

• Procedure
• PowerPoint
• Bozeman Science Lab Overview (Lab 6 - Molecular Biology)
• Transformation Virtual Lab (For absent students and preview) 

• Double Stuff Oreo Data Table (click on tab for your block)

• Data table document for printing
• Enzyme Lab Data (Block 4)
• Enzyme Lab Data (Block 5)
• Enzyme Lab Data (Block 7)