Breakfast and lunch will be provided with vegan/vegetarian options.
All times in Pacific Time
Day 1: HMW DNA extraction
8:30 - 9:00AM
9:00 - 9:20AM
9:20 - 10:20AM
10:20 - 10:30AM
10:30 - 12:00PM
12:00 - 1:00PM
1:00 - 4:45PM
4:45 - 5:00PM
Day 2: Library Prep and Sequencing
8:30 - 9:00AM
9:00 - 9:20AM
9:20 - 10:05AM
10:05 - 10:30AM
10:30 - 10:45AM
10:45 - 11:45AM
11:45 - 12:00PM
12:00 - 1:00PM
1:00 - 2:15PM
2:15 - 2:30PM
2:30- 3:00PM
3:00 - 4:00PM
4:15PM
Day 3: Genome Assembly and KBase Tutorials
Long read apps that will be covered:
FiltLong (quality filtering of reads)
Flye (long read only assembly)
Unicycler (hybrid assembly)
Polypolish (genome polishing)
8:30 - 9:00AM
9:00 - 9:20AM
9:20 - 10:00AM
10:00 - 10:15AM
10:15AM - 12:00PM
12:00 - 1:00PM
1:00 - 2:00PM
2:00 - 2:15PM
2:15 - 2:30PM
2:30 - 2:45PM
2:45 - 3:15PM
3:15 - 4:00PM
4:00PM