Academic work life podcast
December 17, 2019
from the archives
ropensci community call
March 26, 2017
On Wednesday, March 27, 2019, I’ll be featured on an rOpenSci community call, presenting an example of using the ‘rgbif’ R package to download a whole lotta biodiversity occurrence data.
Details here: https://ropensci.org/blog/2019/03/11/commcall-mar2019/
‘Community Call – Research Applications of rOpenSci Taxonomy and Biodiversity Tools – rOpenSci – open tools for open science
Our next Community Call, on March 27th, aims to help people learn about using rOpenSci’s R packages to access and analyze taxonomy and biodiversity data, and to recognize the breadth and depth of their applications. We also aim to learn from the discussion how we might improve these tools. Presentations will start with an introduction to the topic and details on some specific packages and we’ll hear from several people about their “use cases in the wild”.’
If you are not familiar with rOpenSci, they are a non-profit that develops R packages to help researchers access and use data, and train people in R. Check out: https://ropensci.org/about/
You are welcome to join! The community call will also be posted on the website, if you want to view it later.
Check out the call notes here. The rOpenSci discussion page is here. My slides are here. The code I demonstrated is here. Along with some great collaborators, I used this approach to work on this cool bit of science, looking at the association between drought frequency and annual/perennial life history traits. Check out the publication here!
Now contributing to the molecular ecologist
April 13, 2018
I was recently brought on as a regular contributor to the impressive blog at The Molecular Ecologist. This is a great motivation for me to write more and try really hard to have insightful thoughts. Here is the the introduction to all the new contributors, and here is my very first post, near and dear to my heart, about hybridization and invasive species.
A whirlwind of rapid adaptation
August 9, 2016
After much toil, and thanks to co-organizers Brook Moyers and Chris Schell, and our wonderful sponsors (the American Genetics Association, the Genetics Society of America, ROpenSci, and ThermoFisher), our Genomics of Adaption to Human Contexts Symposium at the end of July 2016 was a great success! In the Software Carpentry workshop, Daisie Huang and Scott Chamberlain shared some really useful skills in reproducible research computing. And in the Symposium, some intriguing similarities came to light across all the different fields that our speakers came from. We are currently considering pursuing a journal special issue on the topic, please contact me for more information. Check out our program to see the list of fabulous speakers. Also, I have storified all the tweets!
Phew, that’s a lot o’ links!
For additional posts from the ARchive
Header image: Chorispora tenella grown from USDA GRIN accession. Image by Kathryn Turner.