Publications

Publications

1. Choudhary A, Malick K, Dalavi R, Chande A#. HIV-1 Vpr orchestrates ciTRAN upregulation through TGF-β induction. PLoS Pathogens 2025; 21(7): e1013332.

2. Ramdas P and Chande A#. RNA-FISH for HIV Transcription/Localization Analysis. Methods Mol Biol. 2024;2807:31-43.

3. Kumari S, Bodhale N, Sarode A, Jha MK, Bhadange S, Pandey SP, Selvaraj S, Chande AG, Mukhopadhyaya R, Ghosh SK, Singh S, Mukherjee D, Duffin R, Andrews P, SahaB. Leishmania major MAPK4 intercepts and redirects CD40 signaling promoting infection. International Immunopharmacology 2024;134, 112100.

4. Roy S, Roy S, Banerjee M, Madbhagat P, Chande A, Ukil A. Antileishmanial activity of cathelicidin and its modulation by Leishmania donovani in a CREM-dependent manner for establishing infection. The Journal of Infectious Diseases 2024.

5. Bhardwaj V, Singh A, Choudhary A, Dalavi R, Ralte L, Chawngthu RL, Kumar NS, Vijay N, Chande A#. HIV-1 Vpr induces ciTRAN to prevent transcriptional repression of the provirus. Science Advances 2023. [identified and reported the first functionally characterized circRNA in HIV-1 infection].

6. Ramdas P and Chande A#. SERINC5 Mediates a Postintegration Block to HIV-1 Gene Expression in Macrophages. mBio 2023.

7. Firrito C, Bertelli C, Rosa A, Chande A, Ananth S, van Dijk H, Fackler OT, Stoneham C, Singh R, Guatelli J, Pizzato M. A Conserved Acidic Residue in the C-Terminal Flexible Loop of HIV-1 Nef Contributes to the Activity of SERINC5 and CD4 Downregulation. Viruses. 2023; 15(3):652.

8. Giri J, Basu M, Roy S, Mishra T, Jana K, Chande A and Ukil A. Translationally Controlled Tumor Protein–Mediated Stabilization of Host Antiapoptotic Protein MCL-1 Is Critical for Establishment of Infection by Intramacrophage Parasite Leishmania donovani. Journal of Immunology,  2022;208 (11), 2540-2548.

9. Mishra T, Bhardwaj V, Ahuja N, Gadgil P, Ramdas P, Shukla S, Chande A#. Improved loss-of-function CRISPR/Cas9 genome editing in human cells concomitant with inhibition of TGFβ signaling. Molecular Therapy : Nucleic Acid 2022; 28, 202-218.

10. Mishra T, Dalavi R, Joshi G, Kumar A, Pandey P, Shukla S, Mishra RK, Chande A#. SARS CoV-2 spike E156G/Δ157-158 mutations contribute to increased infectivity and immune escape.  Life Science Alliance 2022; 5 (7).

11. Ramdas P, Bhardwaj V, Singh A, Vijay N, Chande A#. Coelacanth SERINC2 inhibits HIV-1 infectivity and is counteracted by envelope glycoprotein from foamy virus. Journal of Virology 2021; 95(13):e0022921.

12. Choudhary A,  Madbhagat P,  Sreepadmanabh M, Bhardwaj V,  Chande A#. Circular RNA as an additional player in the conflicts between the host and the virus. Frontiers in Immunology 2021;12:602006.

13. Mishra T, Sreepadmanabh M, Ramdas P, Sahu AK, Kumar A, Chande A# .SARS CoV-2 nucleoprotein enhances the infectivity of lentiviral spike particles. Front. Cell. Infect. Microbiol. 2021.

14. Sahu AK, Sreepadmanabh M, Rai M#, Chande A#. SARS-CoV-2: phylogenetic origins, pathogenesis, modes of transmission, and the potential role of nanotechnology. VirusDisease 2021, 1-12.

15. Ramdas P*, Sahu AK*, Mishra T, Bhardwaj V, Chande A#.  From entry to egress: Strategic exploitation of the cellular processes by HIV-1. Frontiers in Microbiology 2020;11, 3021 (invited review article)

16. Sreepadmanabh M, Sahu AK, Chande A#. COVID-19: Advances in Diagnostic Tools, Treatment Strategies, and Vaccine Development. Journal of Biosciences 2020; 45, 148. 

17. Hussain MD*, Bhardwaj V*, Giri A, Chande A#  , Patra A# .  Multifunctional Ionic Porous Frameworks Based on Triaminoguanidinium for CO2 Conversion and Combating Microbes. Chemical Science 2020;11:7910. 

18. Mishra R, Bhattacharya S, Rawat BS, Kumar A, Kumar A, Niraj K, Chande A, Gandhi P, Khetan D, Aggarwal A, Sato S, Tailor P, Takaoka A, Kumar H. MicroRNA-30e-5p has an integrated role in the regulation of the innate immune response during virus infection and systemic lupus erythematosus. iScience 2020;23:101322. 

19. Firrito C, Bertelli C, Vanzo T, Chande A, Pizzato M. SERINC5 as a New Restriction Factor for Human Immunodeficiency Virus and Murine Leukemia Virus. Annual Review of Virology  2018; 5; 323-340.   

20. Gade AB, Bagle PN, Shinde PS, Bhardwaj V, Banerjee S, Chande A, Patil NT. Catalytic Enantioselective 1,3-Alkyl Shift in Alkyl Aryl Ethers: Efficient Synthesis of Optically Active 3,3'-Diaryloxindoles. Angewandte Chemie 2018;57:5735-5739. 

21. Vijay N, Chande A. A hypothetical new role for single-stranded DNA binding proteins in the immune system. Immunobiology 2018; 671-676.

22. Chande A, Firitto C, Pizzato M. SERINC5: not all splice variants work against HIV. Journal of Public Health and Emergency. 2017. 

pre-IISERB

23. Sood C, Marin M, Chande A, Pizzato M, Melikyan GB. SERINC5 Inhibits HIV-1 Fusion Pore Formation by Promoting Functional Inactivation of Envelope Glycoproteins. Journal of Biological Chemistry 2017;292:6014-6026.

24. Chande A, Cucurullo E, Ziglio S, Carpenter S, Pizzato M. S2 from Equine infectious anemia virus is an infectivity factor which counteracts the retroviral inhibitors SERINC5 and SERINC3. Proceedings of the National Academy of Sciences, USA 2016; 113(46):13197-13202.

25. Rosa A*, Chande A*, Ziglio S*, De Sanctis V, Bertorelli R, Goh S L, McCauley SM, Nowolsielska A, Antonarakis SE, Luban J, Santoni FA and Pizzato M. HIV-1 Nef promotes infection by excluding SERINC5 from virion incorporation. Nature 2015; 526:212-7. (*contributed equally)   [Article Preview in- Nature 526, 202–203 (2015) & -Nature Reviews Microbiology 13, 660–661 (2015); Recommended by F1000 as a must read article]

26. Chande AG#, Siddiqui Z, Midha MK, Ravichandran R, Rao KVS. Selective enrichment of mycobacterial proteins from infected host macrophages. Scientific Reports 2015; 5:13430. 

27. Khan TH, Srivastava N, Srivastava A, Sareen A, Mathur RK, Chande AG, Musti KV, Roy S, Mukhopadhyaya R, Saha B. SHP-1 Plays a Crucial Role in CD40 Signaling Reciprocity. The Journal of Immunology 2014;193:3644-53.  

28. Ukil A, Gupta P, Giri J, Srivastav S, Chande AG, Mukhopadhyaya R, Das PK. Leishmania donovani negatively regulates TLR4 mediated host response by preventing ubiquitination dependent degradation of TRAF3. The FASEB Journal 2014;28:1756-68. 

29. Dhamne H*, Chande AG* and Mukhopadhyaya R. Lentiviral vector platform for improved erythropoietin expression concomitant with shRNA mediated host cell elastase down regulation. Plasmid 2014;71:1-7. 

30. Raina S, Chande AG, Baba M and Mukhopadhyaya R. A reporter based single step assay for evaluation of inhibitors targeting HIV-1 Rev-RRE interaction. VirusDisease 2014;25:101-6. 

31. Goel P, Tailor P, Chande AG, Basu A, Mukhopadhyaya R. An infectious HHV-6B isolate from a healthy adult with chromosomally integrated virus and a reporter based relative viral titer assay. Virus Research. 2013;173:280-5. 

32. Chande AG, Raina S, Dhamne H, Kamat RH and Mukhopadhyaya R. Multiple platforms of a HIV-2 derived lentiviral vector for expanded utility. Plasmid 2013;69:90-95. 

33. Sarma U, Sareen A, Maiti M, Kamat V, Sudan R, Pahari S, Srivastava N, Roy S, Sinha S, Ghosh I, Chande AG, Mukhopadhyaya R, Saha B. Modeling and experimental analyses reveals signaling plasticity in a bi-modular assembly of CD40 receptor activated kinases. PLoS One 2012; 7(7):e39898. 

34. Srivastav S, Kar S, Chande AG, Mukhopadhyaya R, Das PK. Leishmania donovani Exploits Host Deubiquitinating Enzyme A20, a Negative Regulator of TLR Signaling, To Subvert Host Immune Response. The Journal of Immunology 2012;189:924-34.  

35. Chande AG, Baba M, Mukhopadhyaya R. A Single Step Assay for Rapid Evaluation of Inhibitors Targeting HIV Type 1 Tat-Mediated Long Terminal Repeat Transactivation. AIDS Research and Human Retroviruses 2012;28:902-6. 

36. Basu Ball W, Kar S, Mukherjee M, Chande AG, Mukhopadhyaya R, Das PK. Uncoupling protein 2 negatively regulates mitochondrial reactive oxygen species generation and induces phosphatase-mediated anti-inflammatory response in experimental visceral leishmaniasis. The Journal of Immunology 2011;187:1322-32.  

37. Dutt A, Ramos AH, Hammerman PS, Mermel C, Cho J, Sharifnia T, Chande A, Tanaka KE, Stransky N, Greulich H, Gray NS, Meyerson M. Inhibitor-sensitive FGFR1 amplification in human non-small cell lung cancer. PLoS One. 2011;6(6):e20351. 

38. Chande A, Kövics GJ, Sandhu SS, Rai MK. Morphological and genetic differentiation among four pigment producing Indian species of Phoma (Saccardo, 1899). Indian Journal of Microbiology 2010 ;50:110-16. 

(#corresponding author)  (*equal contribution)