Nutrient and carbon cycling is a big deal here on planet Earth! As you would have guessed - plants are a BIG part of what makes these cycles go 'round. We will be looking at global biogoechemical cycling as well as plant-scale nutrient cycling. The main constituents we are following around are Carbon (C), Nitrogen (N), and Phosphorus (P).
Nitrogen is a component of chlorophyll and therefore essential for photosynthesis. It is also the basic element of plant and animal proteins, including the genetic material DNA and RNA, and is important in periods of rapid growth. Plants use nitrogen by absorbing either nitrate or ammonium ions through the roots.
Plant Macronutrients - Hydrogen, Carbon, Oxygen (from water or CO2), Nitrogen, Potassium, Calcium, Magnesium, Phosphorus, Sulfur (from soil)
Plant Micronutrients- Chlorine, Iron, Boron, Manganese, Zinc, Copper, Nickel, Molybdenum
Cycles - have a good handle on Carbon, Nitrogen, and Phosphorus cycling as it relates to plants. Understand who the major players are and what mechanisms drive the cycle(s).
What new "wrinkles" has rhizophagy added to understanding how plants cycle nutrients?
What are the implications for anthropogenic perturbations to these nutrient cycles? Identify some examples.
Green Revolution - What was it? Pros and Cons? Relationship to plant nutrients?
The Green Revolution, initiated in the mid-20th century, marked a significant turning point in global agriculture. It was characterized by the widespread adoption of high-yielding crop varieties, coupled with increased use of fertilizers, pesticides, and irrigation. While this technological revolution substantially increased agricultural productivity and helped alleviate global hunger, it also brought about a complex array of social, economic, and environmental consequences that warrant critical analysis.
Positive Impacts:
Increased Food Production: The Green Revolution dramatically increased crop yields, particularly in developing countries, helping to avert widespread famine and improve food security for millions.
Reduced Poverty and Hunger: Increased agricultural productivity led to lower food prices and greater access to food, contributing to poverty reduction in many regions.
Economic Growth: The Green Revolution stimulated economic development in agricultural sectors, creating new jobs and generating income for farmers and rural communities.
Negative Impacts:
Socioeconomic Disparities: The adoption of Green Revolution technologies often favored wealthier farmers who could afford the necessary inputs, leading to increased inequality and displacement of small-scale farmers.
Environmental Degradation: The intensive use of fertilizers and pesticides led to soil degradation, water pollution, and loss of biodiversity. Over-reliance on irrigation depleted water resources and contributed to salinization in some regions.
Health Concerns: The Green Revolution's emphasis on high-yielding monocultures reduced dietary diversity and increased reliance on processed foods, potentially contributing to nutritional deficiencies and health problems.
Loss of Traditional Knowledge: The shift towards industrialized agriculture often marginalized traditional farming practices and knowledge systems, eroding cultural diversity and resilience.
Sustainability Challenges: The heavy dependence on fossil fuels, fertilizers, and pesticides raises concerns about the long-term sustainability of Green Revolution agriculture in the face of climate change and resource depletion.
Conclusion:
The Green Revolution represents a complex and multifaceted phenomenon with both positive and negative consequences. While it undeniably played a crucial role in increasing food production and reducing hunger, its long-term impacts on social equity, environmental sustainability, and human health cannot be ignored. A balanced assessment of the Green Revolution is essential for developing sustainable agricultural practices that can feed a growing global population while minimizing negative social and environmental impacts. Future agricultural strategies must prioritize ecological resilience, social equity, and the preservation of traditional knowledge alongside technological advancements.
Global N & P: This video takes a brief look at the global N and P cycles.
SUMMARY:
I. Introduction
A. Analogy: Abundant yet Inaccessible Resources
Nitrogen and phosphorus are plentiful on Earth but not in usable forms for most organisms.
B. Importance of Nitrogen and Phosphorus
Essential elements for life
Building blocks for crucial biological molecules (proteins, DNA)
II. Nitrogen Cycle
A. Atmospheric Nitrogen (N2)
Makes up 78% of the atmosphere
Inert gas with strong triple bond, unavailable for most organisms
B. Nitrogen Fixation
Process of converting N2 into usable forms (ammonia, nitrates)
Key Players:
Nitrogen-fixing bacteria (e.g., Rhizobium in legume roots)
Lightning
C. Assimilation
Plants absorb ammonia or nitrates through roots
Incorporation into amino acids, proteins, nucleic acids
D. Food Chain Transfer
Herbivores consume plants, obtaining nitrogen
Carnivores consume herbivores, further transferring nitrogen
E. Decomposition and Ammonification
Decomposers (bacteria, fungi) break down dead organisms and waste
Release of ammonia (NH3) back into the environment
F. Nitrification
Bacteria convert ammonia to nitrites (NO2-) and then nitrates (NO3-)
Nitrates are easily absorbed by plants
G. Denitrification
Bacteria convert nitrates back to N2 gas
Returns nitrogen to the atmosphere, completing the cycle
III. Phosphorus Cycle
A. Source: Lithosphere (Earth's crust)
Primarily found in rocks as inorganic phosphates
Sedimentary rocks from ancient ocean floors rich in phosphorus
B. Weathering and Erosion
Releases phosphates from rocks into soil and water
C. Plant Uptake and Assimilation
Plants absorb phosphates through roots
Incorporation into DNA, RNA, ATP, and other molecules
D. Food Chain Transfer
Herbivores consume plants, obtaining phosphorus
Carnivores consume herbivores, continuing the transfer
E. Decomposition
Decomposers release phosphorus back into soil/water
F. Sedimentation
In aquatic systems, phosphorus accumulates in sediment
Over long periods, sediment becomes rock, completing the cycle
G. Geological Uplift
Tectonic activity can expose phosphorus-rich rocks
Restarting the weathering and erosion process
IV. Human Impact on Nutrient Cycles
A. Nitrogen Cycle
Haber-Bosch process: Industrial production of ammonia for fertilizers
Excess fertilizer runoff leads to eutrophication of water bodies
Burning fossil fuels releases nitrogen oxides, contributing to acid rain
B. Phosphorus Cycle
Mining for phosphate fertilizers
Runoff from agriculture and wastewater leads to eutrophication
Limited phosphorus reserves raise concerns about future availability
V. Conclusion
A. Importance of Understanding Nutrient Cycles
Maintain healthy ecosystems
Sustainable agriculture practices
Mitigate environmental impacts
B. Human activities significantly alter nutrient cycles
C. Need for responsible management and conservation
Global C - start at 5:15: This videos take a brief look at global C cycling.
SUMMARY:
I. Introduction: Cycles as the Earth's Recycling Mechanism
Earth's cycles as a fundamental concept in ecology:
Recycling of matter (elements and compounds)
Transformation and transfer of energy (solar, chemical)
Importance for ecosystem function and sustainability
II. The Hydrologic (Water) Cycle: Earth's Water Circulation System
Key Processes:
Evaporation: Solar energy drives the conversion of liquid water into water vapor. Factors influencing evaporation rates: temperature, wind, humidity, surface area.
Condensation: Cooling of water vapor leads to the formation of clouds. Role of condensation nuclei (dust, aerosols).
Precipitation: Water returns to Earth's surface as rain, snow, sleet, or hail. Spatial and temporal variations in precipitation patterns.
Runoff: Water flows over land surfaces, contributing to streams, rivers, and ultimately, oceans. Factors affecting runoff: slope, vegetation cover, soil type.
Infiltration: Water percolates through the soil and rock layers, replenishing groundwater reservoirs. Dependence on soil porosity and permeability.
Storage: Water is stored in various reservoirs: oceans, lakes, rivers, glaciers, ice caps, groundwater. Residence time of water in different reservoirs.
Role of the Oceans:
Primary reservoir of Earth's water (~97%).
Drives the global hydrologic cycle through evaporation.
Influences weather patterns and climate through ocean currents and heat distribution.
Salinity as a result of mineral dissolution and erosion.
Human Impact:
Over-extraction of groundwater: Depletion of aquifers, subsidence, saltwater intrusion.
Pollution: Runoff from agricultural and industrial activities, contamination of water sources.
Climate change: Altered precipitation patterns, increased evaporation, potential intensification of extreme weather events.
III. The Carbon Cycle: The Foundation of Life
Carbon:
Essential building block for all living organisms (carbohydrates, lipids, proteins, nucleic acids).
Exists in various forms: carbon dioxide (CO2), organic matter, fossil fuels, carbonate rocks.
Key Processes:
Photosynthesis: Plants capture atmospheric CO2 and convert it into organic matter, releasing oxygen. Role of chlorophyll, light energy, and biochemical pathways.
Respiration: Organisms break down organic matter, releasing CO2 and energy.
Decomposition: Bacteria and fungi break down dead organisms and waste, returning carbon to the soil and atmosphere.
Combustion: Burning of fossil fuels releases stored carbon as CO2.
Movement through Spheres:
Atmosphere: CO2 as the primary form of carbon.
Biosphere: Carbon stored in living organisms and organic matter.
Geosphere: Carbon locked up in rocks, fossil fuels, and soil.
Hydrosphere: Dissolved CO2 and carbonic acid in oceans.
Human Impact:
Burning of fossil fuels: Significant increase in atmospheric CO2 concentrations, leading to global warming and climate change.
Deforestation: Removal of carbon sinks, reduced capacity for carbon sequestration.
Ocean acidification: Increased absorption of CO2 by oceans, altering marine ecosystems.
IV. Conclusion: Importance of Understanding and Managing Earth's Cycles
Cycles are interconnected and essential for maintaining Earth's life support systems.
Human activities have a profound impact on the functioning of these cycles.
Sustainable practices are crucial to mitigate negative impacts and ensure the well-being of both natural ecosystems and human societies.
Plant-Scale Nutrient Cycling: This is a look at nutrient cycling at the scale of a single plant. Plants engage in cooperation with the soil food web to make soil nutrients available (inorganic form) so that plants can take them up through the roots.
Plant-Scale C cycling: Understand the mechanism by which plants pump carbon into the ground
Global Carbon Cycling
Methane Cycle - part of the Carbon Cycle
Phosphorus Cycle
N Cycle
Important terms for Biological transformations of N:
Nitrification – conversion of ammonium-N (a cation held in soil by CEC) to nitrate-N (a soluble anion easily lost in runoff or leaching)
Denitrification – conversion of plant-available nitrate-N to N-gases that are unavailable to plants and easily lost from soil
Mineralization – biological breakdown of organic-N and release as plant-available ammonium-N
Immobilization (assimilation) – uptake of inorganic-N from soil and incorporation into organic-N compounds in microbes (N becomes unavailable to plants)
N-Fixation – conversion of N-gas in the air to inorganic-N that becomes available to plants (performed by bacteria associated with roots of legumes and other plants, and some free-living soil microbes)
Examples of root nodules produced by many plants in the family Fabaceae that provide oxygen poor well-provisioned habitat for N-fixing bacteria (though 4 genera in Rosaceae also do this!)
Nitrogen fixation: Atmospheric N2 is reduced to NH4+ for use by organisms. Only carried out by certain bacteria -free-living and symbiotic types
Rhizobium and Bradyrhizobium - invade the roots of legumes
(Nitrogen to form protein for carbon-molecules as energy)
Within legume root nodules, nitrogen gas (N2) from the atmosphere is converted into ammonia (NH3), which is then assimilated into amino acids (the building blocks of proteins), nucleotides (the building blocks of DNA and RNA as well as the important energy molecule ATP), and other cellular constituents such as vitamins, flavones, and hormones. Their ability to fix gaseous nitrogen makes legumes an ideal agricultural organism as their requirement for nitrogen fertilizer is reduced. Indeed, high nitrogen content blocks nodule development as there is no benefit for the plant of forming the symbiosis. The energy for splitting the nitrogen gas in the nodule comes from sugar that is translocated from the leaf (a product of photosynthesis). Malate as a breakdown product of sucrose is the direct carbon source for the bacteroid. Nitrogen fixation in the nodule is very oxygen sensitive. Legume nodules harbor an iron containing protein called leghaemoglobin, closely related to animal myoglobin, to facilitate the diffusion of oxygen gas used in respiration.
Diagram describing the growth of root nodules
Ways we try to adjust how fertilizer N transitions in the soil:
1. Nitrogen Stabilizer – substance added to a fertilizer which extends the time the nitrogen component of the fertilizer remains in the soil in the ammoniacal form.
2. Nitrification inhibitor – substance that inhibits the biological oxidation of ammoniacal nitrogen to nitrate nitrogen
3. Urease inhibitor – substance which inhibits, block or delay the hydrolytic action on the urea molecule by the urease enzyme
4. Slow or Controlled Release - chemical binding with urea or ammonia in a form which delays its availability for plant uptake and use after application, or which extends its availability to the plant.
Delayed release of urea using a sulfur coating
Slow release of urea through a porous polymer coating
Nitrogen Assimilation by Plants:
Plants absorb nitrogen from the soil in the form of nitrate (NO3−) and ammonium (NH4+). Ammonium ions are absorbed by the plant via ammonia transporters. Nitrate is taken up by several nitrate transporters that use a proton gradient to power the transport.
Every nitrate ion reduced to ammonia produces one OH− ion. To maintain a pH balance, the plant must either excrete it into the surrounding medium or neutralize it with organic acids. This results in the medium around the plants roots becoming alkaline when they take up nitrate.
To maintain ionic balance, every NO3− taken into the root must be accompanied by either the uptake of a cation or the excretion of an anion. Plants like tomatoes take up metal ions like K+, Na+, Ca2+ and Mg2+ to exactly match every nitrate taken up and store these as the salts of organic acids like malate and oxalate.[16] Other plants like the soybean balance most of their NO3− intake with the excretion of OH− or HCO3−.[17]
Plant Communication & Soil Biology: A Summary
Rhizosphere: The area around plant roots is a bustling hub of biological activity.
Photosynthesis and Exudates: Plants produce sugars through photosynthesis, some of which are released into the rhizosphere.
Bacteria and Fungi: These microbes are attracted to the sugars and break them down, releasing nutrients for the plant.
Mycorrhizae: Fungi form symbiotic relationships with plant roots, extending their reach for nutrients and exchanging them with the plant for sugars.
Importance of Soil Biology: This interconnected system of plants, bacteria, and fungi is crucial for soil health and plant growth.
Threats to Soil Biology: Modern farming practices, like tillage and chemical use, can disrupt this delicate balance.
Solutions for Sustainable Agriculture: Promoting soil biology through cover cropping, reduced tillage, and organic amendments can improve soil health and crop yields.
The Rhizophagy Cycle
Exudate Release: Plants release exudates (sugars, amino acids, etc.) from their root tips to attract beneficial microbes.
Microbial Colonization: Microbes, including bacteria and fungi, are drawn to the exudates and colonize the root hairs and epidermal cells.
Internalization: Plants internalize these microbes into their root cells. The exact mechanism is not fully understood, but it's believed to be a selective process.
Nutrient Extraction: Inside the root cells, the plant subjects the microbes to oxidative stress, breaking down their cell walls and releasing nutrients. This process is facilitated by reactive oxygen species (ROS) like superoxide.
Release and Regeneration: The plant then releases the "digested" microbes back into the rhizosphere. Some microbes survive and repopulate the soil, while others are consumed by other organisms, further enriching the soil ecosystem.
Importance of Rhizophagy
Nutrient Cycling: Rhizophagy is a crucial mechanism for nutrient cycling in the soil, particularly for nitrogen and phosphorus.
Plant Health: It enhances plant immunity, stress tolerance, and overall health by providing essential nutrients and promoting beneficial microbial interactions.
Soil Health: Rhizophagy contributes to soil fertility and resilience by increasing microbial diversity and activity.
Agricultural Implications
Reduced Fertilizer Use: Understanding rhizophagy can help reduce reliance on synthetic fertilizers, as plants can obtain nutrients directly from microbes.
Improved Plant Resilience: By fostering a healthy rhizosphere, rhizophagy can enhance plant resilience to pests, diseases, and environmental stresses.
Sustainable Agriculture: Rhizophagy aligns with regenerative agriculture principles, promoting soil health and reducing reliance on chemical inputs.
Research and Future Directions
While the basic principles of rhizophagy are understood, many questions remain unanswered.
Further research is needed to explore the specific mechanisms of microbial selection, nutrient extraction, and the role of different plant and microbial species.
Understanding rhizophagy could lead to innovative agricultural practices that harness the power of plant-microbe interactions for sustainable food production.
Almost all nutrients pass through the soil solution and up the roots in order to be brought into plants. To some degree there is foliar uptake of Nitrogen as well.