Qualified Assays of Screening
Protein-based biochemical assays (fluorescence- or luminescence-based assays)
These screens use purified proteins and substrates in buffered solutions to produce an optical (fluorescent, luminescent, etc.) readout that monitors enzymatic or binding activity. In these types of screens, small compound inhibitors are ranked by the SIGNALS, referring to the function of targeted protein.
Examples:
FRET substrates for proteases
Fluorophore-tagged glycosides for glycosidase inhibitors
Fluorophore-tagged ligands for protein binding inhibitors
Luciferase fragment-tagged proteins to measure the dimerization
Luciferase fragment-tagged proteins to measure the protein-protein interaction
HDAC-Glo for HDACs
NADP-Glo for NADP-utilizing enzymes
Cell-based assays (Luciferase-based signal detection or Image-based analysis)
These screens can be macromolecular or small-molecule screens that utilize cells plated in 96 or 384 or 1536 well plates to produce visual phenotypic or signal changes in the cells. The measurement can be a signal- or image-based readouts.
Examples:
Cytotoxicity evaluation using CellTiterGlo
Promoter-driven expression of luciferase (firefly, NanoLuc, Lucia)
Promoter-driven expression of fluorescent proteins
Luciferase fragment-tagged proteins to measure dimerization or protein binding
Fluorescent protein-tagged proteins to measure expression of proteins
Fluorescent protein-tagged proteins to monitor localization