Publications

P Banerjee, M Yeager*, GA Voth*, Mechanism of Phosphatidylserine Lipid Scrambling by Human SERINC3, an HIV-1 Restriction Factor, bioRxiv, 2025.11. 13.688349

P. Banerjee and G. A. Voth*, Conformational transitions of the HIV-1 Gag polyprotein upon multimerization and gRNA binding, Biophysical Journal, 123, 42. (Featured on the Cover of the January 2024 issue of the Biophysical Journal)

P. Banerjee, K. Qu, J. A. G. Briggs, and G. A. Voth*, Molecular dynamics simulations of HIV-1 matrix-membrane interactions at different stages of viral maturation, Biophysical Journal, 123, 389.

P. Banerjee, V. Monje-Galvan, and G. A. Voth*, Cooperative Membrane Binding of HIV-1 Matrix Proteins, J. Phys. Chem. B, 128, 11, 2595 (2024)

S. Mukherjee, S. Acharya, S. Mondal, P. Banerjee, and B. Bagchi*, Structural stability of insulin oligomers and protein association–dissociation processes: Free energy landscape

and universal role of water, J. Phys. Chem. B 125, 11793 (2021).

P. Banerjee and B. Bagchi*, Dynamical control by water at a molecular level in protein dimer association and dissociation, Proc. Natl. Acad. Sci. 117(5), 2302.

P. Banerjee and B. Bagchi*, Role of local order in anomalous ion diffusion: Interrogation through tetrahedral entropy of aqueous solvation shells, J. Chem. Phys. 153, 154505.

P. Banerjee and B. Bagchi*, Ion pair correlations due to interference between solvent polarizations induced in water, J. Chem. Phys. 152, 064501(2020).

P. Banerjee, S. Mondal, and B. Bagchi*, Effect of ethanol on insulin dimer dissociation, J. Chem. Phys. 150, 084902.

P. Banerjee and B. Bagchi*, Facilitation of Nucleation of Polymorphic Solids Due to the Presence of Multiple Metastable Phases: Effects of Non-Classical Surface Tension, J. Phys. Chem. C 123, 21207 (2019).

P. Banerjee and B. Bagchi*, Ions’ motion in water, J. Chem. Phys. 150, 190901 (2019)(Perspective article; selected as Featured article).

A. S. Nair, P. Banerjee, S. Sarkar and B. Bagchi*, Dynamics of Linear Molecules in Water: Translation-Rotation Coupling in Jump Motion Driven Diffusion, J. Chem. Phys. 151, 034301(2019).

P. Banerjee, S. Mondal, and B. Bagchi*, Insulin dimer dissociation in aqueous solution: A computational study of free energy landscape and evolving microscopic structure along the reaction pathway, J. Chem. Phys. 149, 114902 (2018).

P. Banerjee and B. Bagchi*, Effects of metastable phases on surface tension, nucleation, and the disappearance of polymorphs, J. Chem. Phys. 149, 214704 (2018).

P. Banerjee and B. Bagchi*, Rotational dynamics of polyatomic ions in aqueous solutions: From continuum model to mode-coupling theory, aided by computer simulations, J. Chem. Phys. 148, 224504 (2018).

P. Banerjee, S. Yashonath, and B. Bagchi*, Rotation driven translational diffusion of polyatomic ions in water: A novel mechanism for breakdown of Stokes-

Einstein relation, J. Chem. Phys. 146, 164502 (2017).

P. Banerjee and B. Bagchi*, A mode-coupling theory analysis of the observed diffusion anomaly in aqueous polyatomic ions, J. Chem. Phys. 147, 124502 (2017).

P. Banerjee, S. Yashonath, and B. Bagchi*, Coupled jump rotational dynamics in aqueous nitrate solutions, J. Chem. Phys. 145, 234502.