Project Submissions

Team 1 - Automated Lab Notebook

Team 1 - ALN: Automated Lab Notebook

James Bole Pan, Jeffrey Wang, Amy Zhu

Github: https://github.com/jeff-d-wang/ALN

Track: Open

Team 2 -ESM - BioNexus

Team 2 - BioNexus

Daniel Kabanovsky, Calvin Hu, Jung Won Park

Track: ESM

Team 3 - <Boom Extractor>

Team 3 - Boom Extractor

**BroadHacks 2025 Judge's Choice Award Winner**

**BroadHacks 2025 Broadie's Choice Award Winner**

Ujwal Gupta, Tony Shen, Christy Biji, Aarti Krishnan

GitHub: https://github.com/tsa87/BoomExtractor

Track: Open

Team 4 - All of Us: No-Code Analysis Toolkit

Suraj Pathak, Rajavi Shah, Eren Shin

GitHub: https://github.com/sspathak/AllOfUs-LogisticRegression-UI

Track: Open

Team 6 - Science Delivers Full

Team 6 - Science Delivers

**BroadHacks 2025 Broadie's Choice Award Runner Up**

Kei Ito, Shaw Kagawa, Antonia Kowalewski, Ivonne Wang, Eric Weitz

Github: https://github.com/broadinstitute/science-delivers

Track: Open

Team 7 - Democratizing access to bioinformatics tools with AI

Daniel Marten

Track: Open

Team 8 - ESM - Outsmarting with ESM3 and Viral Escape

Team 8 - Outsmarting Viral Escape with ESM3

**BroadHacks 2025 ESM Creativity Award Winner**

Jialan Ma, Mugdha Singh, Sara Zantou, Elias Bruss

Github: https://github.com/eliasmbr/25BroadHackathon

Track: ESM

Team 9 - ESM - Decode. Predict. Disrupt.

Team 9 - Decode. Predict. Disrupt.

Dev Gulati, Youyun Zheng, Maria de los Reyes Capilla Guerra

Track: ESM

Team 10 - ESM Structure Function Relationships

Team 10 - Using ESM to Reveal Structure–Function–Evolution Relationships in Protein Variants

Ebele Okafor, Shawn Bai

Track: ESM

Team 11 - QSAR Prediction.pptx

Team 11 - Leveraging Experimental Metadata in QSAR Prediction

Hao Shen, Michael Akpabey

GitHub: https://github.com/Michael000777/BroadHackathon2025

Track: Open

Team 13 - Caramel Flan :)

Team 13 - Caramel Flan @ 177C

**BroadHacks 2024 Broadie's Choice Award Third Place**

Akshaya Thoutam, Harry Li, Tanvi Jain

Github: https://github.com/harrlol/SQUIDp

Track: Open

Team 16 - Rare Disease with LLMs.pdf

Team 16 - Rare Disease GPT

Marc Duby, Kyuryung Kim, Thanh Long Nguyen

Track: Open

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