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Nini lab Journal
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期刊圖表中文資源
Archive
Plots Archive
Barplots
Another barplot
3in1 barplot
Bar plot with significant*
Bar and Pie plots
Brain plots
Brainplot_p_global
UKB2factor genomicSEM Brainmap
Before and after brainmaps (UKB and ABCD gclust inversion)
ggsegRIO(from Hao)
Heatmaps/correlation matrix
figure5A
Heatmap with 2 side bars (fig4a)
Heatmap with star
Correlation Matrix for Annotations
pheno_geno_corr
Correlation matrix (combine 2 heatmaps using transparent method)
Miami plots
Manhattan
Manhattan plots
genomicsSEM_manhattan
Other plots
12 Traits line graphs
16 Dot plots
combined plot
path diagram (using igraph)
fig3A
20 Lines linegraph
fig3
AD hallmark
cytoscape archive projects
Data Management
8.reorder_cor_mat.R
UKBio Data extraction and PRSice
Breakdown gclust440
Merge 2 files by first column
Merge_SNPmarker
Correlation between 2 files
Searching LD SNPs
plink to raw
data matching percentage check
gene_symbol_conversion
gene symbol converstion
Network analysis notebooks
AD localization
Tools
R
Plot making
mini project examples
correlation matrix plot
Adding suffix and prefix
Missing values / dealing with NAs
ggseg
Terminal
ssh
Python/ python related
Python basics
Pandas
python base projects
AD networktool kit
Netcoloc notebook
Jupyter notebook
Anaonoda
Cytoscape
Docker
gt
Matlab
CH Lab Resoruces
journal club
note taking
Nini lab Journal
Python basics
Pandas
Projects done using python
AD networktool kit
Localization
Separation
Tools that help you work with python:
Jupyter notebook
Anaonoda
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