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All publications can be found on PubMed.gov and are submitted to bioRxiv before submission to a journal.
(161) Mukherjee, P.; Leal-Calvo, T.; Ferguson, L.; Cate, J. H. D. miRNA-Mediated Regulation of Gene Expression During Early Activation in Jurkat Cells. bioRxiv 2025. https://doi.org/10.1101/2025.06.15.659805.
(160) Majumdar, C.; Kent, A. D.; Hamlish, N. X.; Zhu, C.; Fitzgerald, K. A.; Schepartz, A.; Cate, J. H. D. Escherichia coli ribosomes support translation of (R) and (S) β2-hydroxyacids in vitro: a structural and biochemical study. ChemRxiv. 2025. https://doi.org/10.26434/chemrxiv-2025-d1896.
(159) Langeberg, C. J.; Kim, T.; Nagle, R.; Meredith, C.; Garuadapuri, D. A.; Doudna, J. A.; Cate, J. H. D. Improving RNA Secondary Structure Prediction Through Expanded Training Data. bioRxiv 2025. https://www.biorxiv.org/content/10.1101/2025.05.03.652028v1.
(158) Shi, L.; Penev, P.; Nissley, A. J.; Nayak, D. D.; Sachdeva, R.; Cate, J. H. D.; Banfield, J. F. Circular 23S rRNA within archaeal ribosomes. bioRxiv 2025. https://www.biorxiv.org/content/10.1101/2025.04.27.650855v1.
(157) Nissley, A. J.; Shulgina, Y.; Kivimae, R. W.; Downing, B. E.; Penev, P. I.; Nayak, D. D.; Banfield, J. F.; Cate, J. H. D. Structure of an archaeal ribosome reveals a divergent active site and hibernation factor. Nat. Microbiol. 2025. https://doi.org/10.1038/s41564-025-02065-w.
(156) Aleksashin, N. A.; Langeberg, C. J.; Shelke, R. R.; Yin, T.; Cate, J. H. D. RNA elements required for the high efficiency of West Nile Virus-induced ribosomal frameshifting. Nucleic Acids Res. 2025, 53 (3). https://doi.org/10.1093/nar/gkae1248.
(155) Boyko, K. V.; Bernstein, R. A.; Kim, M.; Cate, J. H. D. Role of ribosomal protein bS1 in orthogonal mRNA start codon selection. Biochemistry 2025, 64 (3), 710-718. https://doi.org/10.1021/acs.biochem.4c00688.
(154) Kent, A. D.*; Robins, J. G.*; Knudson, I. J.; Vance, J. T.; Solivan, A. C.; Hamlish, N. X.; Fitzgerald, K. A.; Schepartz, A.; Miller, S. J.; Cate, J. H. D. Thioesters support efficent protein biosynthesis by the ribosome. ACS Cent. Sci. 2025. 11 (3), 404-412. https://doi.org/10.1021/acscentsci.4c01698.
(153) Mestre-Fos, S.; Ferguson, L.; Trinidad, M.; Ingolia, N. T.; Cate, J. H. D. eIF3 engages with 3′-UTR termini of highly translated mRNAs. eLife 2025, 13. https://doi.org/10.7554/eLife.102977.3.
(152) Shulgina, Y.*; Trinidad, M. I.*; Langeberg, C. J.*; Nisonoff, H.*; Chithrananda, S.*; Skopinstev, P.*; Nissley, A. J.*; Patel, J.; Boger, R. S.; Shi, H.; Yoon, P. H.; Doherty, E. E.; Pande, T.; Iyer, A. M.; Doudna, J. A.; Cate, J. H. D.* RNA language models predict mutations that improve RNA function. Nat. Commun. 2024, 15, 10627. https://doi.org/10.1038/s41467-024-54812-y.
(151) González-Sánchez, A. M.; Castellanos-Silva, E. A.; Díaz-Figueroa, G.; Cate, J. H. D. JUN mRNA Translation Regulation is Mediated by Multiple 5′ UTR and Start Codon Features. PLoS ONE 2024 19 (3). https://doi.org/10.1371/journal.pone.0299779.
(150) Aleksashin, N. A.; Chang, S. T.-L.; Cate, J. H. D. A Highly Efficient Human Cell-Free Translation System. RNA 2023, 29, 1960-1972. https://rnajournal.cshlp.org/content/29/12/1960
(149) Volegoca, M. P.; Hermosillo, C.; Cate, J. H. D. The Helix-Loop-Helix Motif of Human EIF3A Regulates Translation of Proliferative Cellular mRNAs. PLoS ONE 2023, 18 (9): e0292080. https://doi.org/10.1371/journal.pone.0292080.
(148) Watson, Z. L.; Knudson, I. J.; Ward, F. R.; Miller, S. J.; Cate, J. H. D.; Schepartz, A.; Abramyan, A. M. Atomistic simulations of the Escherichia coli ribosome provide selection criteria for translationally active substrates. Nat. Chem. 2023 15, 913-921. https://doi.org/10.1038/s41557-023-01226-w.
(147) Majumdar, C.; Walker, J. A.; Francis, M. B.; Schepartz, A.; Cate, J. H. D. Aminobenzoic Acid Derivatives Obstruct Induced Fit in the Catalytic Center of the Ribosome. ACS Cent. Sci. 2023, 9 (6), 1160-1169. https://doi.org/10.1021/acscentsci.3c00153.
(146) Nissley, A. J.; Kamal, T. S.; Cate, J. H. D. Interactions Between Terminal RNA Helicies Affect the Stability of the Escherichia coli Large Ribosomal Subunit. RNA 2023, 29, 1500-1508. https://rnajournal.cshlp.org/content/29/10/1500.
(145) Westhof, E.; Watson, Z. L.; Zirbel, C. L.; Cate, J. H. D. Anionic G●U Pairs in Bacterial Ribosomal rRNAs. RNA 2023, 29, 1069-1076. https://doi.org/10.1261/rna.079583.123.
(144) Nissley, A. J.; Penev, P. I.; Watson, Z. L.; Banfield, J. F.; Cate, J. H. D. Rare Ribosomal RNA Sequences from Archaea Stabilize the Bacterial Ribosome. Nucleic Acids Res. 2023, 51 (4), 1880-1894. https://doi.org/10.1093/nar/gkac1273.
(143) Poddar, S.; Tanaka, J.; Running, K. L. D.; Kariyawasam, G. K.; Faris, J. D.; Friesen, T. L.; Cho, M.-J.; Cate, J. H. D.; Staskawicz, B. Optimization of Highly Efficient Exogenous-DNA-Free Cas9-Ribonucleoprotein Mediated Gene Editing in Disease Susceptibility Loci in Wheat (Triticum Aestivum L.). Front. Plant Sci. 2023, 13, 1084700. https://doi.org/10.3389/fpls.2022.1084700.
(142) Tsuchida C.A.; Brandes N.; Bueno R.; Trinidad M.; Mazumder T.; Yu B.; Hwang B.; Chang C.; Liu J.; Sun Y.; Hopkins C.R.; Parker K.R.; Qi Y.; Hofman L.; Satpathy A.T.; Stadtmauer E.A.; Cate J.H.D.; Eyquem J.; Fraietta J.A.; June C.H.; Chang H.Y.; Ye C.J.; Doudna J.A. Mitigation of chromosome loss in clinical CRISPR- Cas9-engineered T cells. Cell. 2023, 186 (21), 4567-4582. https://doi.org/10.1016/j.cell.2023.08.041.
(141) Chen X.; Molenda O.; Brown C.T.; Toth C.R.A.; Guo S.; Luo F.; Howe J.; Nesbø C.L.; He C.; Montabana E.A.; Cate J.H.D.; Banfield J.F.; Edwards E.A. “Candidatus Nealsonbacteria” Are Likely Biomass Recycling Ectosymbionts of Methanogenic Archaea in a Stable Benzene-Degrading Enrichment Culture. Appl. Environ. Microbiol. 2023, 89 (5), e00025-23. https://doi.org/10.1128/aem.00025-23.
(140) Mendez, A. S.; Ly, M.; González-Sánchez, A. M.; Hartenian, E.; Ingolia, N. T.; Cate, J. H.; Glaunsinger, B. A. The N-Terminal Domain of SARS-CoV-2 Nsp1 Plays Key Roles in Suppression of Cellular Gene Expression and Preservation of Viral Gene Expression. Cell Rep. 2021, 37 (3), 109841. https://doi.org/10.1016/j.celrep.2021.109841.
(139) He, C.; Keren, R.; Whittaker, M. L.; Farag, I. F.; Doudna, J. A.; Cate, J. H. D.; Banfield, J. F. Genome-Resolved Metagenomics Reveals Site-Specific Diversity of Episymbiotic CPR Bacteria and DPANN Archaea in Groundwater Ecosystems. Nat. Microbiol. 2021, 6 (3), 354–365. https://doi.org/10.1038/s41564-020-00840-5.
(138) De Silva, D.; Ferguson, L.; Chin, G. H.; Smith, B. E.; Apathy, R. A.; Roth, T. L.; Blaeschke, F.; Kudla, M.; Marson, A.; Ingolia, N. T.; Cate, J. H. Robust T Cell Activation Requires an eIF3-Driven Burst in T Cell Receptor Translation. eLife 2021, 10. https://doi.org/10.7554/eLife.74272.
(137) Watson, Z. L.; Ward, F. R.; Méheust, R.; Ad, O.; Schepartz, A.; Banfield, J. F.; Cate, J. H. Structure of the Bacterial Ribosome at 2 Å Resolution. eLife 2020, 9. https://doi.org/10.7554/eLife.60482.
(136) Li, W.; Chang, S. T.-L.; Ward, F. R.; Cate, J. H. D. Selective Inhibition of Human Translation Termination by a Drug-like Compound. Nat. Commun. 2020, 11 (1), 4941. https://doi.org/10.1038/s41467-020-18765-2.
(135) Tharp, J. M.; Ad, O.; Amikura, K.; Ward, F. R.; Garcia, E. M.; Cate, J. H. D.; Schepartz, A.; Söll, D. Initiation of Protein Synthesis with Non-Canonical Amino Acids In Vivo. Angew. Chem. Int. Ed Engl. 2020, 59 (8), 3122–3126. https://doi.org/10.1002/anie.201914671.
(134) Poddar, S.; Tanaka, J.; Cate, J. H. D.; Staskawicz, B.; Cho, M.-J. Efficient Isolation of Protoplasts from Rice Calli with Pause Points and Its Application in Transient Gene Expression and Genome Editing Assays. Plant Methods 2020, 16(1), 151. https://doi.org/10.1186/s13007-020-00692-4.
(133) Al-Shayeb, B.; Sachdeva, R.; Chen, L.-X.; Ward, F.; Munk, P.; Devoto, A.; Castelle, C. J.; Olm, M. R.; Bouma-Gregson, K.; Amano, Y.; He, C.; Méheust, R.; Brooks, B.; Thomas, A.; Lavy, A.; Matheus-Carnevali, P.; Sun, C.; Goltsman, D. S. A.; Borton, M. A.; Sharrar, A.; Jaffe, A. L.; Nelson, T. C.; Kantor, R.; Keren, R.; Lane, K. R.; Farag, I. F.; Lei, S.; Finstad, K.; Amundson, R.; Anantharaman, K.; Zhou, J.; Probst, A. J.; Power, M. E.; Tringe, S. G.; Li, W.-J.; Wrighton, K.; Harrison, S.; Morowitz, M.; Relman, D. A.; Doudna, J. A.; Lehours, A.-C.; Warren, L.; Cate, J. H. D.; Santini, J. M.; Banfield, J. F. Clades of Huge Phages from across Earth’s Ecosystems. Nature 2020, 578 (7795), 425–431. https://doi.org/10.1038/s41586-020-2007-4.
(132) Ward, F. R.*; Watson, Z. L.*; Ad, O.; Schepartz, A.; Cate, J. H. D. Defects in the Assembly of Ribosomes Selected for β-Amino Acid Incorporation. Biochemistry 2019, 58 (45), 4494–4504. https://doi.org/10.1021/acs.biochem.9b00746.
(131) Travin, D. Y.; Watson, Z. L.; Metelev, M.; Ward, F. R.; Osterman, I. A.; Khven, I. M.; Khabibullina, N. F.; Serebryakova, M.; Mergaert, P.; Polikanov, Y. S.; Cate, J. H. D.; Severinov, K. Structure of Ribosome-Bound Azole-Modified Peptide Phazolicin Rationalizes Its Species-Specific Mode of Bacterial Translation Inhibition. Nat. Commun. 2019, 10 (1), 4563. https://doi.org/10.1038/s41467-019-12589-5.
(130) Pulos-Holmes, M. C.; Srole, D. N.; Juarez, M. G.; Lee, A. S.-Y.; McSwiggen, D. T.; Ingolia, N. T.; Cate, J. H. Repression of Ferritin Light Chain Translation by Human eIF3. eLife 2019, 8. https://doi.org/10.7554/eLife.48193.
(129) Liu, J.-J.; Zhang, G.-C.; Kwak, S.; Oh, E. J.; Yun, E. J.; Chomvong, K.; Cate, J. H. D.; Jin, Y.-S. Overcoming the Thermodynamic Equilibrium of an Isomerization Reaction through Oxidoreductive Reactions for Biotransformation. Nat. Commun. 2019, 10 (1), 1356. https://doi.org/10.1038/s41467-019-09288-6.
(128) Lilleorg, S.; Reier, K.; Pulk, A.; Liiv, A.; Tammsalu, T.; Peil, L.; Cate, J. H. D.; Remme, J. Bacterial Ribosome Heterogeneity: Changes in Ribosomal Protein Composition during Transition into Stationary Growth Phase. Biochimie 2019, 156, 169–180. https://doi.org/10.1016/j.biochi.2018.10.013.
(127) Liaud, N.; Horlbeck, M. A.; Gilbert, L. A.; Gjoni, K.; Weissman, J. S.; Cate, J. H. D. Cellular Response to Small Molecules That Selectively Stall Protein Synthesis by the Ribosome. PLoS Genet. 2019, 15 (3), e1008057. https://doi.org/10.1371/journal.pgen.1008057.
(126) Li, W.; Ward, F. R.; McClure, K. F.; Chang, S. T.-L.; Montabana, E.; Liras, S.; Dullea, R. G.; Cate, J. H. D. Structural Basis for Selective Stalling of Human Ribosome Nascent Chain Complexes by a Drug-like Molecule. Nat. Struct. Mol. Biol. 2019, 26 (6), 501–509. https://doi.org/10.1038/s41594-019-0236-8.
(125) Dao Duc, K.; Batra, S. S.; Bhattacharya, N.; Cate, J. H. D.; Song, Y. S. Differences in the Path to Exit the Ribosome across the Three Domains of Life. Nucleic Acids Res. 2019, 47 (8), 4198–4210. https://doi.org/10.1093/nar/gkz106.
(124) Arake de Tacca, L. M.; Pulos-Holmes, M. C.; Floor, S. N.; Cate, J. H. D. PTBP1 MRNA Isoforms and Regulation of Their Translation. RNA 2019, 25 (10), 1324–1336. https://doi.org/10.1261/rna.070193.118.
(123) Rosemond, S. N.; Hamadani, K. M.; Cate, J. H. D.; Marqusee, S. Modulating Long-Range Energetics via Helix Stabilization: A Case Study Using T4 Lysozyme. Protein Sci. 2018, 27 (12), 2084–2093. https://doi.org/10.1002/pro.3521.
(122) Londregan, A. T.; Wei, L.; Xiao, J.; Lintner, N. G.; Petersen, D.; Dullea, R. G.; McClure, K. F.; Bolt, M. W.; Warmus, J. S.; Coffey, S. B.; Limberakis, C.; Genovino, J.; Thuma, B. A.; Hesp, K. D.; Aspnes, G. E.; Reidich, B.; Salatto, C. T.; Chabot, J. R.; Cate, J. H. D.; Liras, S.; Piotrowski, D. W. Small Molecule Proprotein Convertase Subtilisin/Kexin Type 9 (PCSK9) Inhibitors: Hit to Lead Optimization of Systemic Agents. J. Med. Chem. 2018, 61 (13), 5704–5718. https://doi.org/10.1021/acs.jmedchem.8b00650.
(121) Lintner, N. G.; McClure, K. F.; Petersen, D.; Londregan, A. T.; Piotrowski, D. W.; Wei, L.; Xiao, J.; Bolt, M.; Loria, P. M.; Maguire, B.; Geoghegan, K. F.; Huang, A.; Rolph, T.; Liras, S.; Doudna, J. A.; Dullea, R. G.; Cate, J. H. D. Correction: Selective Stalling of Human Translation through Small-Molecule Engagement of the Ribosome Nascent Chain. PLoS Biol. 2018, 16 (4), e1002628. https://doi.org/10.1371/journal.pbio.1002628.
(120) Lapinaite, A.; Doudna, J. A.; Cate, J. H. D. Programmable RNA Recognition Using a CRISPR-Associated Argonaute. Proc. Natl. Acad. Sci. U. S. A. 2018, 115 (13), 3368–3373. https://doi.org/10.1073/pnas.1717725115.
(119) Kim, H.; Oh, E. J.; Lane, S. T.; Lee, W.-H.; Cate, J. H. D.; Jin, Y.-S. Enhanced Cellobiose Fermentation by Engineered Saccharomyces Cerevisiae Expressing a Mutant Cellodextrin Facilitator and Cellobiose Phosphorylase. J. Biotechnol. 2018, 275, 53–59. https://doi.org/10.1016/j.jbiotec.2018.04.008.
(118) Davis López, S. A.; Griffith, D. A.; Choi, B.; Cate, J. H. D.; Tullman-Ercek, D. Evolutionary Engineering Improves Tolerance for Medium-Chain Alcohols in Saccharomyces Cerevisiae. Biotechnol. Biofuels 2018, 11, 90. https://doi.org/10.1186/s13068-018-1089-9.
(117) Cernak, P.; Estrela, R.; Poddar, S.; Skerker, J. M.; Cheng, Y.-F.; Carlson, A. K.; Chen, B.; Glynn, V. M.; Furlan, M.; Ryan, O. W.; Donnelly, M. K.; Arkin, A. P.; Taylor, J. W.; Cate, J. H. D. Engineering Kluyveromyces Marxianus as a Robust Synthetic Biology Platform Host. mBio 2018, 9 (5). https://doi.org/10.1128/mBio.01410-18.
(116) Zhang, C.; Acosta-Sampson, L.; Yu, V. Y.; Cate, J. H. D. Screening of Transporters to Improve Xylodextrin Utilization in the Yeast Saccharomyces Cerevisiae. PloS One 2017, 12 (9), e0184730. https://doi.org/10.1371/journal.pone.0184730.
(115) Thakor, N.; Smith, M. D.; Roberts, L.; Faye, M. D.; Patel, H.; Wieden, H.-J.; Cate, J. H. D.; Holcik, M. Cellular MRNA Recruits the Ribosome via eIF3-PABP Bridge to Initiate Internal Translation. RNA Biol. 2017, 14 (5), 553–567. https://doi.org/10.1080/15476286.2015.1137419.
(114) Lintner, N. G.; McClure, K. F.; Petersen, D.; Londregan, A. T.; Piotrowski, D. W.; Wei, L.; Xiao, J.; Bolt, M.; Loria, P. M.; Maguire, B.; Geoghegan, K. F.; Huang, A.; Rolph, T.; Liras, S.; Doudna, J. A.; Dullea, R. G.; Cate, J. H. D. Selective Stalling of Human Translation through Small-Molecule Engagement of the Ribosome Nascent Chain. PLoS Biol. 2017, 15 (3), e2001882. https://doi.org/10.1371/journal.pbio.2001882.
(113) Jin, Y.-S.; Cate, J. H. Metabolic Engineering of Yeast for Lignocellulosic Biofuel Production. Curr. Opin. Chem. Biol. 2017, 41, 99–106. https://doi.org/10.1016/j.cbpa.2017.10.025.
(112) Han, B.-G.; Watson, Z.; Cate, J. H. D.; Glaeser, R. M. Monolayer-Crystal Streptavidin Support Films Provide an Internal Standard of Cryo-EM Image Quality. J. Struct. Biol. 2017, 200 (3), 307–313. https://doi.org/10.1016/j.jsb.2017.02.009.
(111) Hamadani, K. M.; Howe, J.; Jensen, M. K.; Wu, P.; Cate, J. H. D.; Marqusee, S. An in Vitro Tag-and-Modify Protein Sample Generation Method for Single-Molecule Fluorescence Resonance Energy Transfer. J. Biol. Chem. 2017, 292 (38), 15636–15648. https://doi.org/10.1074/jbc.M117.791723.
(110) Chomvong, K.; Lin, E.; Blaisse, M.; Gillespie, A. E.; Cate, J. H. D. Relief of Xylose Binding to Cellobiose Phosphorylase by a Single Distal Mutation. ACS Synth. Biol. 2017, 6 (2), 206–210. https://doi.org/10.1021/acssynbio.6b00211.
(109) Chomvong, K.; Benjamin, D. I.; Nomura, D. K.; Cate, J. H. D. Cellobiose Consumption Uncouples Extracellular Glucose Sensing and Glucose Metabolism in Saccharomyces Cerevisiae. mBio 2017, 8 (4). https://doi.org/10.1128/mBio.00855-17.
(108) Cate, J. H. D. Human eIF3: From “blobology” to Biological Insight. Philos. Trans. R. Soc. Lond. B. Biol. Sci. 2017, 372 (1716). https://doi.org/10.1098/rstb.2016.0176.
(107) Acosta-Sampson, L.; Döring, K.; Lin, Y.; Yu, V. Y.; Bukau, B.; Kramer, G.; Cate, J. H. D. Role for Ribosome-Associated Complex and Stress-Seventy Subfamily B (RAC-Ssb) in Integral Membrane Protein Translation. J. Biol. Chem. 2017, 292 (48), 19610–19627. https://doi.org/10.1074/jbc.M117.813857.
(106) Smith, M. D.; Arake-Tacca, L.; Nitido, A.; Montabana, E.; Park, A.; Cate, J. H. Assembly of EIF3 Mediated by Mutually Dependent Subunit Insertion. Structure 2016, 24 (6), 886–896. https://doi.org/10.1016/j.str.2016.02.024.
(105) Sen, A.; Acosta-Sampson, L.; Alvaro, C. G.; Ahn, J. S.; Cate, J. H. D.; Thorner, J. Internalization of Heterologous Sugar Transporters by Endogenous α-Arrestins in the Yeast Saccharomyces Cerevisiae. Appl. Environ. Microbiol. 2016, 82 (24), 7074–7085. https://doi.org/10.1128/AEM.02148-16.
(104) Samelson, A. J.; Jensen, M. K.; Soto, R. A.; Cate, J. H. D.; Marqusee, S. Quantitative Determination of Ribosome Nascent Chain Stability. Proc. Natl. Acad. Sci. U. S. A. 2016, 113 (47), 13402–13407. https://doi.org/10.1073/pnas.1610272113.
(103) Ryan, O. W.; Poddar, S.; Cate, J. H. D. CRISPR-Cas9 Genome Engineering in Saccharomyces Cerevisiae Cells. Cold Spring Harb. Protoc. 2016, 2016 (6). https://doi.org/10.1101/pdb.prot086827.
(102) Li, X.; Park, A.; Estrela, R.; Kim, S.-R.; Jin, Y.-S.; Cate, J. H. D. Comparison of Xylose Fermentation by Two High-Performance Engineered Strains of Saccharomyces Cerevisiae. Biotechnol. Rep. Amst. Neth. 2016, 9, 53–56. https://doi.org/10.1016/j.btre.2016.01.003.
(101) Lee, A. S.; Kranzusch, P. J.; Doudna, J. A.; Cate, J. H. D. eIF3d Is an mRNA Cap-Binding Protein That Is Required for Specialized Translation Initiation. Nature 2016, 536 (7614), 96–99. https://doi.org/10.1038/nature18954.
(100) Glaeser, R. M.; Han, B.-G.; Csencsits, R.; Killilea, A.; Pulk, A.; Cate, J. H. D. Factors That Influence the Formation and Stability of Thin, Cryo-EM Specimens. Biophys. J. 2016, 110 (4), 749–755. https://doi.org/10.1016/j.bpj.2015.07.050.
(99) Estrela, R.; Cate, J. H. D. Energy Biotechnology in the CRISPR-Cas9 Era. Curr. Opin. Biotechnol. 2016, 38, 79–84. https://doi.org/10.1016/j.copbio.2016.01.005.
(98) East-Seletsky, A.; O’Connell, M. R.; Knight, S. C.; Burstein, D.; Cate, J. H. D.; Tjian, R.; Doudna, J. A. Two Distinct RNase Activities of CRISPR-C2c2 Enable Guide-RNA Processing and RNA Detection. Nature 2016, 538 (7624), 270–273. https://doi.org/10.1038/nature19802.
(97) Cocozaki, A. I.; Altman, R. B.; Huang, J.; Buurman, E. T.; Kazmirski, S. L.; Doig, P.; Prince, D. B.; Blanchard, S. C.; Cate, J. H. D.; Ferguson, A. D. Resistance Mutations Generate Divergent Antibiotic Susceptibility Profiles against Translation Inhibitors. Proc. Natl. Acad. Sci. U. S. A. 2016, 113 (29), 8188–8193. https://doi.org/10.1073/pnas.1605127113.
(96) Chomvong, K.; Bauer, S.; Benjamin, D. I.; Li, X.; Nomura, D. K.; Cate, J. H. D. Bypassing the Pentose Phosphate Pathway: Towards Modular Utilization of Xylose. PloS One 2016, 11 (6), e0158111. https://doi.org/10.1371/journal.pone.0158111.
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(94) Cate, J. H. D. STRUCTURE. A Big Bang in Spliceosome Structural Biology. Science 2016, 351 (6280), 1390–1392. https://doi.org/10.1126/science.aaf4465.
(93) Wei, N.; Oh, E. J.; Million, G.; Cate, J. H. D.; Jin, Y.-S. Simultaneous Utilization of Cellobiose, Xylose, and Acetic Acid from Lignocellulosic Biomass for Biofuel Production by an Engineered Yeast Platform. ACS Synth. Biol. 2015, 4 (6), 707–713. https://doi.org/10.1021/sb500364q.
(92) Wasserman, M. R.; Pulk, A.; Zhou, Z.; Altman, R. B.; Zinder, J. C.; Green, K. D.; Garneau-Tsodikova, S.; Cate, J. H. D.; Blanchard, S. C. Chemically Related 4,5-Linked Aminoglycoside Antibiotics Drive Subunit Rotation in Opposite Directions. Nat. Commun. 2015, 6, 7896. https://doi.org/10.1038/ncomms8896.
(91) Noeske, J.; Wasserman, M. R.; Terry, D. S.; Altman, R. B.; Blanchard, S. C.; Cate, J. H. D. High-Resolution Structure of the Escherichia Coli Ribosome. Nat. Struct. Mol. Biol. 2015, 22 (4), 336–341. https://doi.org/10.1038/nsmb.2994.
(90) Li, X.; Yu, V. Y.; Lin, Y.; Chomvong, K.; Estrela, R.; Park, A.; Liang, J. M.; Znameroski, E. A.; Feehan, J.; Kim, S. R.; Jin, Y.-S.; Glass, N. L.; Cate, J. H. D. Expanding Xylose Metabolism in Yeast for Plant Cell Wall Conversion to Biofuels. eLife 2015, 4. https://doi.org/10.7554/eLife.05896.
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