We aim to build imaging instruments that can help clinicians detect cancer non invasively in live tissue using machine learning. We believe that by combining optical coherence tomography (OCT) with machine learning we can create a virtual biopsy tool that can provide intuitive images for clinical diagnosis at a single cell resolution.
One in four people worldwide will ultimately be affected by cancer. Surgical removal is the main treatment for most solid cancers. The surgeon is tasked with the delicate balancing act of excising enough tissue to avoid leaving behind residual cancer cells while not removing too much tissue, which can harm organ function. This is particularly important for brain tumors, the most common type of solid tumor in children and the leading cause of pediatric cancer mortality.
The gold standard for detecting most solid cancers and confirming tumor margins is hematoxylin and eosin (H&E) stained tissue sections, which require an invasive biopsy procedure. Unfortunately, current non-invasive in-vivo imaging modalities do not produce images of comparable usefulness.
We developed a novel imaging modality called a “virtual H&E biopsy” that generates H&E-like images of skin tissue in real-time, non-invasively, up to 1mm into the tissue. This imaging modality provides real-time diagnosis of tumor margins and invasiveness by scanning a large tissue area for residual cancer cells. Such information would guide treatment decisions for diseases such as brain and skin cancer. Beyond its clinical benefits, this technology can also be used for research into tumor development and tumor responses to treatment by providing in-vivo H&E-like images of healthy and tumorous tissue microstructures changing over time, allowing physicians to watch tumor growth.
The images below show a traditional histology image compared to virtual histology, scale bar is 100 microns.
No biopsy required to generate histology image.
Biopsy of skin tissue using traditional imaging method.
Our system is sensitive to structural and cellular changes at micron-scale resolution in vivo, such as those from injury or disease. Therefore, it can serve as a tool to visualize and quantify spatiotemporal brain elasticity patterns. This highly transformative and versatile platform allows accurate investigation of brain cellular architectural changes by quantifying features such as brain cell bodies’ density, volume, and average distance to the nearest cell. Hence, it may assist in longitudinal studies of microstructural tissue alteration in aging, injury, or disease in a living rodent brain.
Very cool visualization of micro brain deformations and movements of neuron cells at a micron level. This technology could also be used in the future to visualize how different treatments help the brain evolve or react to cancer.
In the image below you can see all the neurons we found in a 1mm brain volume.
See our paper here.
Building a miniaturized greenhouse to study how to optimize growth of superfoods in space.
The first colonies on the Moon over the next two decades will require small plant based closed loop life support systems. A key limitation of a small system is its tendency to quickly diverge from equilibrium and collapse, putting astronauts in immediate danger. Recent developments in synthetic biology have laid an opportunity to use light to control plant’s signaling pathways including controlling for growth, flowering, and photosynthesis rate. This control is not used to increase plant’s yield per-say, but rather allow a tight control of the plant, allowing pathways switching using LED or laser light to control what the plant is doing.
Our long-term goal is to use light to tightly control plant growth to stabilize a small ecological system growing on another planet. Our first experiment will demonstrate light switching of a signaling pathway in chickpeas.
Our first mission to test this concept was launched to the International Space Station Feb 2022.
Read more on our blog post