The phylum Ascomycota is one of the largest and most diverse groups within the Kingdom Fungi, encompassing organisms as varied as molds, powdery mildews, yeasts, and cup fungi. Currently, approximately 60,000 species have been described, though molecular studies suggest that the true diversity of this group may be far greater.
Members of Ascomycota occupy a wide range of ecological roles:
Decomposers – breaking down dead organic material and recycling nutrients.
Pathogens – causing diseases in plants, animals, and even humans.
Mutualists – forming symbiotic relationships with other organisms, such as lichens.
Approximately half of all described species form associations with green algae or cyanobacteria to create lichens (covered in another station). These partnerships allow fungi to colonize extreme environments, including bare rock, arctic tundra, and deserts.
Familiar examples of ascomycete diversity include:
Food molds – the blue, green, and red molds commonly found on spoiled foods.
Plant pathogens – species causing devastating diseases such as chestnut blight (Cryphonectria parasitica) and Dutch elm disease (Ophiostoma ulmi), both of which have nearly eliminated their respective host trees from North American forests.
One defining characteristic of ascomycetes is their septate hyphae—filamentous structures divided by crosswalls (septa) that contain pores. These pores enable the flow of cytoplasm, organelles, and nutrients between compartments, allowing the fungus to grow and respond rapidly to environmental changes.
The most diagnostic feature of the phylum is the ascus (plural: asci), a saclike sexual reproductive structure in which haploid spores—called ascospores—are produced. This distinctive trait gives the group its common name: "sac fungi."
Members of Ascomycota can reproduce sexually or asexually, often using both strategies depending on environmental conditions:
Sexual Reproduction
Occurs within the ascus, where meiosis produces haploid ascospores.
These spores are released and dispersed, often by wind or water, to colonize new environments.
Asexual Reproduction
Many species also produce conidia, which are asexual spores formed by mitosis from haploid nuclei.
Conidia develop externally on specialized hyphae called conidiophores.
Because they are mitotically derived, all conidia from a single individual are genetically identical clones.
The general terms mold and mildew describe the discolorations and odors caused by fungal growth in moist environments. Housekeepers typically use these terms for the fungi that develop on forgotten food in refrigerators or damp basement walls. Gardeners often use them to describe the powdery white growth seen on ornamental plants, caused by over 1,000 species of parasitic fungi.
It is important to note that not all molds belong to the phylum Ascomycota. The term mold refers to a growth form, much like the term tree: just as “tree” can describe flowering plants or conifers from different phyla, “mold” can refer to fungi from multiple taxonomic groups.
To illustrate ascomycete molds, we focus on the genus Penicillium, a group of fungi widely distributed in nature. Members of Penicillium are common in homes and are well known for causing food spoilage, often identified by their characteristic greenish coloration. Some species produce the antibiotic penicillin, which revolutionized medicine and remains one of the most widely used treatments for bacterial infections in humans and animals. In nature, Penicillium produces penicillin to reduce competition with bacteria by inhibiting their growth.
The placement of Penicillium within the phylum Ascomycota has been debated. To date, sexual reproduction has never been observed in this genus; no one has ever documented the production of asci, the saclike reproductive structures that define the phylum. So why include Penicillium here?
The reason lies in its asexual reproduction. Penicillium produces conidia, a defining secondary characteristic of many ascomycetes. Although sexual reproduction has not been confirmed, molecular studies and shared morphological traits strongly support its classification within Ascomycota.
Examine the images of Penicillium provided below. Focus on the tips of the hyphae, where you will find highly branched, broom-like structures called conidiophores. These are specialized sporangia that produce asexual spores known as conidia through mitosis.
Once mature, conidia are released and dispersed by air currents to colonize new environments. These spores are highly resistant to desiccation, allowing them to remain dormant in soil or other substrates for years. This dormancy provides a protective refuge for the fungus’s genetic material until conditions become favorable for growth.
Finally, note that the hyphae of Penicillium are septate, meaning they are divided by crosswalls containing pores that facilitate the exchange of nutrients and cytoplasm between compartments.
An orange that is being invaded by Penicillium. The white portion is the hyphae that are growing as a mycelium. The green powdery-like surface are the conidia that will fall off as spores to spread the fungus.
This an illustration of a hypha that forms a conidiophore and produces conidia. Conidia are the asexual spores that are formed by the pinching off and fragmentation of the hyphae.
This is a microscopic image of the conidiophore with the conidia at the tip.
Prepared slide of Penicillium
Compound microscope
Note: Handle slides carefully to prevent breakage.
Examine the prepared slide of Penicillium under the microscope.
Locate the hyphae, which form the filamentous body of the fungus.
Look for upright structures called conidiophores extending from the hyphae.
At the tips of the conidiophores, observe the chains of conidia (asexual spores).
Notice the characteristic brush-like structure formed by the conidiophores and spores.
Remove the slide from the microscope stage.
Return the prepared slide to its storage container.
Turn off the microscope and leave the workstation ready for the next group.
You have likely seen the cup-shaped ascocarps (fruiting bodies) produced by members of the phylum Ascomycota. These structures are often found on decaying logs and fallen leaves in moist environments. Ascocarps are sexual reproductive structures that play a critical role in the fungal life cycle.
One of the more commonly encountered genera of cup fungi is Peziza, which we will use here to highlight several unique features of the phylum Ascomycota.
Examine the images of Peziza provided below. The relatively large ascocarp visible above ground is connected to an extensive mycelium beneath the surface. The fleshy body of the ascocarp is composed of intertwined hyphae that are packed closely together for structural support.
The hyphae of Peziza are septate and, depending on the stage of the life cycle, may contain two genetically distinct haploid nuclei, a condition referred to as being dikaryotic. Like other fungi, the cytoplasm within the hyphae is surrounded by a chitinous cell wall, providing both rigidity and protection.
These hyphae are single-cell thick and grow by increasing in length, not in width, enabling the fungus to explore new environments and exploit fresh food resources. As the hyphae grow, they secrete enzymes that digest wood and other organic material externally. The resulting small molecules are then absorbed across the thin filaments’ large surface area and distributed throughout the mycelium via cytoplasmic flow through the pores of the septa.
This is a typical ascocarp "cup" of the phylum Ascomycota. This is the genus Peziza.
This illustration shows how the hyphae pack together to form the ascocarp.
Preserved or dried Peziza specimen
Dissecting microscope (if available)
Reference image of Peziza if a specimen is unavailable
Note: Handle preserved specimens carefully.
Observe the overall structure of the Peziza specimen.
Notice the cup-shaped fruiting body, which is called an ascocarp.
Examine the inner surface of the cup, where spores are produced.
Identify the hymenium, the spore-producing layer lining the inside of the cup.
Consider how the cup shape may help with spore dispersal.
Return the specimen to its container.
If a dissecting microscope was used, turn it off and leave the station organized.
Peziza reproduces asexually in a manner similar to Penicillium. It produces chains of conidia at the tips of hyphae through mitosis. These conidia eventually break off and are dispersed. When they land in a suitable environment, they germinate and grow into new haploid hyphae capable of establishing an entirely new mycelium (see life cycle diagram below).
To study the sexual reproductive structures of Peziza, examine the diagrams and prepared slide images of a section through the ascocarp. The inner surface of the cup-shaped ascocarp appears darkly stained under the microscope because this is where the asci are located.
Beneath this layer of asci lies a loosely organized region where the hyphae are cut at many angles and packed tightly together to form the fleshy body of the ascocarp. Within this mass, there are three types of hyphae, distinguished by the nuclear organization within their cells:
1. Monokaryotic Hyphae
Contain one haploid nucleus per cell.
Arise by mitosis from germinating ascospores of either the + or – mating types.
These monokaryotic hyphae make up the bulk of the ascocarp.
2. Dikaryotic Hyphae
Formed when + and – hyphae undergo plasmogamy (cytoplasmic fusion).
Each cell contains two genetically distinct haploid nuclei that remain separate rather than fusing immediately.
Historically, the donor and recipient hyphae were referred to by outdated botanical terms:
Antheridium → the nuclear donor
Ascogonium → the nuclear recipient
After plasmogamy, the dikaryotic cells undergo intranuclear mitosis followed by cytoplasmic division, producing two daughter cells, each containing a pair of + and – nuclei.
3. Ascus Formation and Karyogamy
The dikaryotic hyphae grow upward toward the inner surface of the cup.
In the terminal cells at the tips of these hyphae, the + and – nuclei finally undergo karyogamy (nuclear fusion) to form a single diploid nucleus, creating a zygote.
This diploid stage is very short-lived. It immediately undergoes meiosis to produce four haploid nuclei.
In Peziza and many other species, each of these four nuclei divides once more by mitosis, resulting in eight haploid ascospores contained within a saclike ascus.
The inner surface of the cup-shaped ascocarp is lined with thousands of asci, each producing eight ascospores that will eventually be released to start the cycle anew.
Two different mating types will form an ascocarp together. The blue is the "+" type, the green is the "-" type and the yellow represents the fusion of the two and the development of the asci as a result of sexual reproduction.
The ascocarp is the cup-like structure that holds the asci as seen in this section through an ascocarp.
Each ascus has 8 ascospores (stained red). This is a result of meiosis first followed by mitosis.
Prepared slide of Peziza
Compound microscope
Note: Handle prepared slides carefully.
Examine the prepared slide of Peziza under the microscope.
Look for elongated sac-like structures called asci.
Observe the ascospores contained within each ascus.
Notice how many asci are arranged together within the tissue.
Compare these sexual spores with the asexual spores (conidia) you observed in Penicillium.
Remove the slide from the microscope stage.
Return the prepared slide to its storage container.
Turn off the microscope before leaving the station.
Saccharomyces is a genus of fungi that includes several species of yeasts, many of which are economically and biologically important. These organisms are unicellular, saprotrophic fungi that obtain nutrients by breaking down organic material. Members of this genus are best known for their roles in food production and fermentation, earning them common names like brewer’s yeast and baker’s yeast.
Different species of Saccharomyces are widely used in the production of bread, beer, wine, and certain medications. In bread dough, yeasts consume available sugars through cellular respiration, releasing large amounts of carbon dioxide. This trapped gas causes the dough to rise, giving bread its light, airy texture.
Under anaerobic conditions—when oxygen is limited or absent—Saccharomyces switches to fermentation. In this process, it continues to break down sugars but instead produces alcohol as a waste byproduct of anaerobic respiration. This ability is central to the production of beer, wine, and other alcoholic beverages.
The key characteristic that places Saccharomyces within the phylum Ascomycota is its ability to form a simple ascus during its diploid stage, in which haploid spores are produced. While yeasts lack the large, complex ascocarps seen in cup fungi, the presence of the ascus firmly aligns them with the sac fungi.
Yeast, of the genus Saccharomyces, are unicellular and can reproduce rapidly through budding and the formation of spores.
A yeast ascus may contain 4-8 spores and is usually formed as part of the diploid reproductive stage.
Prepared slide of Saccharomyces
Compound microscope
Note: Handle prepared slides carefully.
Observe the prepared slide of Saccharomyces under the microscope.
Identify the individual yeast cells, which are single-celled fungi.
Look for evidence of budding, the process by which new yeast cells form.
Compare the size of parent cells and developing buds.
Remove the slide from the microscope stage.
Return the prepared slide to its storage container.
Turn off the microscope and clean the workstation if necessary.
Yeast culture
Microscope slide
Coverslip
Dropper or pipette
Water
Compound microscope
Note: Wash hands after handling biological materials.
Prepare a wet mount of the yeast sample.
Examine the yeast cells under the microscope.
Look for cells undergoing budding.
Observe whether the yeast cells appear isolated or in clusters.
Compare what you observe in the wet mount with the prepared yeast slide.
Dispose of the wet mount slide as instructed by your instructor or rinse it if it is reusable.
Wipe the workspace if needed.
Turn off the microscope and leave the station ready for the next group.
Cordyceps is a genus of ascomycete fungi containing approximately 400 described species. Most species within this genus are endoparasitoids, meaning they are parasitic on insects and other arthropods, though a few species are known to parasitize other fungi.
This genus has a worldwide distribution, but the greatest diversity occurs in Asia, particularly in Nepal, China, Japan, Bhutan, Korea, Vietnam, and Thailand. Cordyceps species are especially abundant in humid temperate and tropical forests, where environmental conditions favor their growth and dispersal.
When a Cordyceps fungus infects a host, the mycelium invades the host’s body and eventually replaces its tissues entirely. Over time, the fungus produces an elongated fruiting body called an ascocarp, which emerges from the host’s body. Depending on the species, the ascocarp may be cylindrical, branched, or highly complex in shape.
The ascocarp contains numerous small, flask-shaped structures called perithecia. Within each perithecium are asci, which produce thread-like ascospores. These ascospores typically break into smaller fragments, which are believed to be the infective agents responsible for spreading the fungus to new hosts.
There are many species of Cordyceps and they take on many shapes and colors. This is a species specific to crickets. The many club shaped structures coming out of the cricket is the fungus.
This carpenter ant was infected with a species of Cordyceps. It would have altered the ant's brain causing it to climb to a high place (called summiting) and clamp down with its jaws as it dies. The fungus then grows out of the head of the ant to infect other ants (see the video below).
One of the most famous species, Ophiocordyceps unilateralis, demonstrates an extraordinary form of behavioral manipulation. When this fungus infects an ant, it invades the ant’s nervous system and alters its behavior.
Infected ants leave their nests and climb to a precise height on vegetation.
They bite down on a leaf or twig in a “death grip,” locking themselves in place.
The fungus then kills the ant and grows its fruiting body from the back of the ant’s head, releasing spores into the environment to infect other ants below.
This remarkable strategy ensures that spores are dispersed in the exact microhabitats where other ants are likely to encounter them, maximizing the fungus’s chances of survival and reproduction.
This video shows some of the fascinating biology and diversity of this genus.