Publication
BOOK CHAPTER/TRANSLATION
PUBLICATION
2023
Cancer signature ensemble integrating cfDNA methylation, copy number, and fragmentation facilitates multi-cancer early detection. Kim SY, Jeong S, Lee W, Jeon Y, Kim YJ, Park S, Lee D, Go D, Song SH, Lee S, Woo HG, Yoon JK, Park YS, Kim YT, Lee SH, Kim KH, Lim Y, Kim JS, Kim HP, Bang D, Kim TY. Exp Mol Med. 2023 Nov 1. doi: 10.1038/s12276-023-01119-5. PMID: 37907748
Assessment of neutralization susceptibility of Omicron subvariants XBB.1.5 and BQ.1.1 against broad-spectrum neutralizing antibodies through epitopes mapping. Shah M, Woo HG. Front Mol Biosci. 2023 Sep 27;10:1236617. doi: 10.3389/fmolb.2023.1236617. eCollection 2023. PMID: 37828918
Critical roles of parkin and PINK1 in Coxsackievirus B3-induced viral myocarditis. Jin U, Park SJ, Lee BG, Kim JB, Kim SJ, Joe EH, Woo HG, Park SM. Microbes Infect. 2023 Aug 11:105211. doi: 10.1016/j.micinf.2023.105211. PMID: 37574181
CCIDB: a manually curated cell-cell interaction database with cell context information. Noh JY, Lee HI, Choi JH, Cho SH, Yi YH, Lim JH, Myung EB, Shin YJ, Shin HJ, Woo HG. Database (Oxford). 2023 Aug 11;2023:baad057. doi: 10.1093/database/baad057. PMID: 37566630
Effect of Janus Kinase 3 Inhibitor on Sebaceous Gland Regeneration during Skin Wound Healing. Jo WT, Kim AY, Woo HG, Song HJ, Baik EJ. Ann Dermatol. 2023 Aug;35(4):275-284. doi: 10.5021/ad.22.204.PMID: 37550228
THOC2 expression and its impact on 5-fluorouracil resistance in glioblastoma multiforme. Lee YJ, Jung JH, Chang DY, Kim MG, Bashyal N, Hwang WS, Woo HG, Paek SH, Suh-Kim H, Kim SS. Am J Cancer Res. 2023 Jun 15;13(6):2410-2425. eCollection 2023. PMID: 37424800
5-fluorouracil resistance in glioblastoma multiforme.Lee YJ, Jung JH, Chang DY, Kim MG, Bashyal N, Hwang WS, Woo HG, Paek SH, Suh-Kim H, Kim SS. Am J Cancer Res. 2023 Jun 15;13(6):2410-2425. eCollection 2023. PMID: 37424800
Single-cell transcriptome profiling of the stepwise progression of head and neck cancer. Choi JH, Lee BS, Jang JY, Lee YS, Kim HJ, Roh J, Shin YS, Woo HG, Kim CH. Nat Commun. 2023 Feb 24;14(1):1055. doi: 10.1038/s41467-023-36691-x. PMID: 36828832
Molecular and radiopathologic spectrum between HCC and intrahepatic cholangiocarcinoma. Jeon Y, Kwon SM, Rhee H, Yoo JE, Chung T, Woo HG, Park YN. Hepatology 2023 Jan 1;77(1):92-108. doi: 10.1002/hep.32397. Epub 2022 Feb 26.PMID: 35124821
2022
CGV: Cancer Genome Viewer, a web service for integrative cancer genome and pharmacogenomic data analysis. Choi JH, Choi HS, Cho SH, Lee JH, Woo HG. Bioinformatics. 2022 Sep 20:btac642. doi: 10.1093/bioinformatics/btac642. PMID: 36130060
The paradigm of immune escape by SARS-CoV-2 variants and strategies for repositioning subverted mAbs against escaped VOCs. Shah M, Woo HG. Mol Ther. 2022 Sep 9:S1525-0016(22)00508-1. doi: 10.1016/j.ymthe.2022.08.020. Online ahead of print. PMID: 36087577
SARS-CoV-2 pan-variant inhibitory peptides deter S1-ACE2 interaction and neutralize delta and omicron pseudoviruses. Shah M, Ung Moon S, Hyun Kim J, Thanh Thao T, Woo HG. Comput Struct Biotechnol J. 2022;20:2042-2056. doi: 10.1016/j.csbj.2022.04.030. Epub 2022 Apr 26. PMID: 35495107
Consensus subtypes of hepatocellular carcinoma associated with clinical outcomes and genomic phenotypes.Lee SH, Yim SY, Jeong YS, Li QX, Kang SH, Sohn BH, Kumar SV, Shin JH, Choi YR, Shim JJ, Kim H, Kim J, Kim S, Guo S, Johnson RL, Kaseb A, Kang KJ, Chun YS, Jang HJ, Lee BG, Woo HG, Ha MJ, Akbani R, Roberts LR, Wheeler DA, Lee JS. Hepatology. 2022 Mar 29. doi: 10.1002/hep.32490. PMID: 35349735
Lung and lymph node metastases from hepatocellular carcinoma: Comparison of pathological aspects. Woo HY, Rhee H, Yoo JE, Kim SH, Choi GH, Kim DY, Woo HG, Lee HS, Park YN. Liver Int. 2022 Jan;42(1):199-209. doi: 10.1111/liv.15051. PMID: 34490997
Omicron: A Heavily Mutated SARS-CoV-2 Variant Exhibits Stronger Binding to ACE2 and Potently Escapes Approved COVID-19 Therapeutic Antibodies. Shah M, Woo HG. Front Immunol. 2022 Jan 24;12:830527. doi: 10.3389/fimmu.2021.830527. PMID: 35140714
NAMPT mitigates colitis severity by supporting redox-sensitive activation of phagocytosis in inflammatory macrophages. Hong SM, Lee AY, Hwang SM, Ha YJ, Kim MJ, Min S, Hwang W, Yoon G, Kwon SM, Woo HG, Kim HH, Jeong WI, Shen HM, Im SH, Lee D, Kim YS. Redox Biol. 2022 Jan 15;50:102237. doi: 10.1016/j.redox.2022.102237. PMID: 35063804
2021
Pathogenic NOTCH3 Variants Are Frequent Among the Korean General Population. Kang CH, Kim YM, Kim YJ, Hong SJ, Kim DY, Woo HG, Kim YR, Kim JG, Lee JS, Kong MH, Kim HJ, Choi JC. Neurol Genet. 2021 Dec 6;7(6):e639. doi: 10.1212/NXG.0000000000000639. PMID: 34881353
MRPS31 loss is a key driver of mitochondrial deregulation and hepatocellular carcinoma aggressiveness. Min S, Lee YK, Hong J, Park TJ, Woo HG, Kwon SM, Yoon G. Cell Death Dis. 2021 Nov 12;12(11):1076. doi: 10.1038/s41419-021-04370-8. PMID: 34772924
Tumor suppressor RBM24 inhibits nuclear translocation of CTNNB1 and TP63 expression in liver cancer cells. Moon SU, Kim JH, Woo HG. Oncol Lett. 2021 Sep;22(3):674. doi: 10.3892/ol.2021.12935.
TPRG1-AS1 induces RBM24 expression and inhibits liver cancer progression by sponging miR-4691-5p and miR-3659. Choi JH, Kwon SM, Moon SU, Yoon S, Shah M, Lee BG, Yang J, Park YN, Wang HJ, Woo HG. Liver Int. 2021 Jul 30. doi: 10.1111/liv.15026. PMID: 34328265
Endoplasmic Reticulum Stress Induces CAP2 Expression Promoting Epithelial-Mesenchymal Transition in Liver Cancer Cells. Yoon S, Shin B, Woo HG. Mol Cells. 2021 Jul 23. doi: 10.14348/molcells.2021.0031. PMID: 34294609
USO1 isoforms differentially promote liver cancer progression by dysregulating the ER-Golgi network. Yoon S, Choi JH, Shah M, Kwon SM, Yang J, Park YN, Wang HJ, Woo HG. Carcinogenesis. 2021 Jul 22:bgab067. doi: 10.1093/carcin/bgab067. PMID: 34293111
YAP inactivation in estrogen receptor alpha-positive hepatocellular carcinoma with less aggressive behavior. Jeon Y, Yoo JE, Rhee H, Kim YJ, Il Kim G, Chung T, Yoon S, Shin B, Woo HG, Park YN. Exp Mol Med. 2021 Jun 18. doi: 10.1038/s12276-021-00639-2. PMID: 34145394
Molecular Perspectives of SARS-CoV-2: Pathology, Immune Evasion, and Therapeutic Interventions. Shah M, Woo HG. Mol Cells. 2021 Jun 1. doi: 10.14348/molcells.2021.0026. PMID: 34059561
Kim YJ, Choo OS, Lee JS, Jang JH, Woo HG, Choung YH. Neuroscience. 2021 Feb 10;455:39-51. PMID: 33346118
Global spliceosome activity regulates entry into cellular senescence. Kwon SM, Min S, Jeoun UW, Sim MS, Jung GH, Hong SM, Jee BA, Woo HG, Lee C, Yoon G. FASEB J. 2021 Jan;35(1):e21204. PMID: 33337569
2020
Mutations in the SARS-CoV-2 spike RBD are responsible for stronger ACE2 binding and poor anti-SARS-CoV mAbs cross-neutralization.Shah M, Ahmad B, Choi S, Woo HG. Comput Struct Biotechnol J. 2020;18:3402-3414. doi: 10.1016/j.csbj.2020.11.002. Epub 2020 Nov 12. PMID: 33200028
Sex-Biased Molecular Signature for Overall Survival of Liver Cancer Patients. Kim SY, Song HK, Lee SK, Kim SG, Woo HG, Yang J, Noh HJ, Kim YS, Moon A. Biomol Ther (Seoul). 2020 Nov 1;28(6):491-502. doi:10.4062/biomolther.2020.157. PMID: 33077700
MLH1 single-nucleotide variant in circulating tumor DNA predicts overall survival of patients with hepatocellular carcinoma. Kim SS, Eun JW, Choi JH, Woo HG, Cho HJ, Ahn HR, Suh CW, Baek GO, Cho SW, Cheong JY. Sci Rep. 2020 Oct 20;10(1):17862. doi: 10.1038/s41598-020-74494-y. PMID: 33082400
PCAF-Mediated Histone Acetylation Promotes Replication Fork Degradation by MRE11 and EXO1 in BRCA-Deficient Cells.Kim JJ, Lee SY, Choi JH, Woo HG, Xhemalce B, Miller KM. Mol Cell. 2020 Oct 15;80(2):327-344.e8. doi: 10.1016/j.molcel.2020.08.018. Epub 2020 Sep 22. PMID: 32966758
Transcriptional regulatory networks of tumor-associated macrophages that drive malignancy in mesenchymal glioblastoma. Sa JK, Chang N, Lee HW, Cho HJ, Ceccarelli M, Cerulo L, Yin J, Kim SS, Caruso FP, Lee M, Kim D, Oh YT, Lee Y, Her NG, Min B, Kim HJ, Jeong DE, Kim HM, Kim H, Chung S, Woo HG, Lee J, Kong DS, Seol HJ, Lee JI, Kim J, Park WY, Wang Q, Sulman EP, Heimberger AB, Lim M, Park JB, Iavarone A, Verhaak RGW, Nam DH. Genome Biol. 2020 Aug 26;21(1):216. doi: 10.1186/s13059-020-02140-x. PMID: 32847614
scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data. Choi JH, In Kim H, Woo HG. BMC Bioinformatics. 2020 Aug 4;21(1):342. doi: 10.1186/s12859-020-03700-5. PMID: 32753029
Mitoribosome Defect in Hepatocellular Carcinoma Promotes an Aggressive Phenotype with Suppressed Immune Reaction. Kwon SM, Lee YK, Min S, Woo HG, Wang HJ, Yoon G. iScience. 2020 Jun 26;23(6):101247. doi: 10.1016/j.isci.2020.101247. Epub 2020 Jun 7. PMID: 32629612
2019
Functional Genomic Complexity Defines Intratumor Heterogeneity and Tumor Aggressiveness in Liver Cancer. Kwon SM, Budhu A, Woo HG, Chaisaingmongkol J, Dang H, Forgues M, Harris CC, Zhang G, Auslander N, Ruppin E, Mahidol C, Ruchirawat M, Wang XW. Sci Rep. 2019 Nov 15;9(1):16930. doi: 10.1038/s41598-019-52578-8. PMID: 31729408
Dynamics of Genomic, Epigenomic, and Transcriptomic Aberrations during Stepwise Hepatocarcinogenesis. Jee BA, Choi JH, Rhee H, Yoon S, Kwon SM, Nahm JH, Yoo JE, Jeon Y, Choi GH, Woo HG, Park YN. Cancer Res. 2019 Nov 1;79(21):5500-5512. doi: 10.1158/0008-5472.CAN-19-0991. Epub 2019 Sep 10. PMID: 31506333
EPHB6 mutation induces cell adhesion-mediated paclitaxel resistance via EPHA2 and CDH11 expression. Yoon S, Choi JH, Kim SJ, Lee EJ, Shah M, Choi S, Woo HG. Exp Mol Med. 2019 Jun 3;51(6):1-12. doi: 10.1038/s12276-019-0261-z. PMID: 31160603
RNAi Screening-based Identification of USP10 as a Novel Regulator of Paraptosis. Kim JY, Lee DM, Woo HG, Kim KD, Lee HJ, Kwon YJ, Choi KS. Sci Rep. 2019 Mar 20;9(1):4909. doi: 10.1038/s41598-019-40982-z.
SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package. Joo T, Choi JH, Lee JH, Park SE, Jeon Y, Jung SH, Woo HG. BMC Bioinformatics. 2019 Feb 20;20(1):90. doi: 10.1186/s12859-019-2676-x. PMID: 30786880
Embryonic Stem Cell-Derived mmu-miR-291a-3p Inhibits Cellular Senescence in Human Dermal Fibroblasts Through the TGF-β Receptor 2 Pathway. Bae YU, Son Y, Kim CH, Kim KS, Hyun SH, Woo HG, Jee BA, Choi JH, Sung HK, Choi HC, Park SY, Bae JH, Doh KO, Kim JR. J Gerontol A Biol Sci Med Sci. 2019 Aug 16;74(9):1359-1367. doi: 10.1093/gerona/gly208. PMID: 30239625
2018
Identification of novel susceptibility loci associated with hepatitis B surface antigen seroclearance in chronic hepatitis B. Kim TH, Lee EJ, Choi JH, Yim SY, Lee S, Kang J, Lee YR, Lee HA, Choi HS, Kim ES, Keum B, Seo YS, Yim HJ, Jeen YT, Chun HJ, Lee HS, Kim CD, Woo HG, Um SH. PLoS One. 2018;13(7):e0199094. PMID:29975729 (*co-corresponding)
Recapitulation of pharmacogenomic data reveals that invalidation of SULF2 enhance sorafenib susceptibility in liver cancer. Yoon S, Lee EJ, Choi JH, Chung T, Kim DY, Im JY, Bae MH, Kwon JH, Kim HH, Kim HC, Park YN, Wang HJ, Woo HG. Oncogene. 2018 Aug;37(32):4443-4454. PMID:29720727
Multiplatform Genomic Roadmap of Hepatocellular Carcinoma: A Matter of Molecular Heterogeneity. Woo HG, Kim YJ. Hepatology. 2018 Nov;68(5):2029-2032. PMID:29637589
Identification of genomic aberrations associated with lymph node metastasis in diffuse-type gastric cancer. Choi JH, Kim YB, Ahn JM, Kim MJ, Bae WJ, Han SU, Woo HG*, Lee D*. Exp Mol Med. 2018 Apr 6;50(4):6. PMID:29622765 (*co-corresponding)
Keratin 19 Expression in Hepatocellular Carcinoma Is Regulated by Fibroblast-Derived HGF via a MET-ERK1/2-AP1 and SP1 Axis. Rhee H, Kim HY, Choi JH, Woo HG, Yoo JE, Nahm JH, Choi JS, Park YN. Cancer Res. 2018 Apr 1;78(7):1619-1631. PMID:29363547
Transcriptomic and histopathological analysis of cholangiolocellular differentiation trait in intrahepatic cholangiocarcinoma. Rhee H, Ko JE, Chung T, Jee BA, Kwon SM, Nahm JH, Seok JY, Yoo JE, Choi JS, Thorgeirsson SS, Andersen JB, Lee HS, Woo HG, Park YN. Liver Int. 2018 Jan;38(1):113-124. PMID:28608943 (*co-corresponding)
2017
A Genome-Wide Association Study Identifies <i>UTRN</i> Gene Polymorphism for Restless Legs Syndrome in a Korean Population. Cho CH, Choi JH, Kang SG, Yoon HK, Park YM, Moon JH, Jung KY, Han JK, Shin HB, Noh HJ, Koo YS, Kim L, Woo HG, Lee HJ. Psychiatry Investig. 2017 Nov;14(6):830-838. PMID:29209388 (*co-corresponding)
Integrative analysis of genomic and epigenomic regulation of the transcriptome in liver cancer. Woo HG, Choi JH, Yoon S, Jee BA, Cho EJ, Lee JH, Yu SJ, Yoon JH, Yi NJ, Lee KW, Suh KS, Kim YJ. Nat Commun. 2017 Oct 10;8(1):839. PMID:29018224
Pan-cancer analysis of systematic batch effects on somatic sequence variations. Choi JH, Hong SE, Woo HG. BMC Bioinformatics. 2017 Apr 11;18(1):211. PMID:28399795
Mutations acquired by hepatocellular carcinoma recurrence give rise to an aggressive phenotype. Choi JH, Kim MJ, Park YK, Im JY, Kwon SM, Kim HC, Woo HG*, Wang HJ* Oncotarget. 2017 Apr 4;8(14):22903-22916. PMID:28038442 (*co-corresponding)
Underexpression of HOXA11 Is Associated with Treatment Resistance and Poor Prognosis in Glioblastoma. Se YB, Kim SH, Kim JY, Kim JE, Dho YS, Kim JW, Kim YH, Woo HG, Kim SH, Kang SH, Kim HJ, Kim TM, Lee ST, Choi SH, Park SH, Kim IH, Kim DG, Park CK. Cancer Res Treat. 2017 Apr;49(2):387-398. PMID:27456940
The Ubiquitin-like with PHD and Ring Finger Domains 1 (UHRF1)/DNA Methyltransferase 1 (DNMT1) Axis Is a Primary Regulator of Cell Senescence. Jung HJ, Byun HO, Jee BA, Min S, Jeoun UW, Lee YK, Seo Y, Woo HG, Yoon G. J Biol Chem. 2017 Mar 3;292(9):3729-3739. PMID:28100769 (*co-corresponding)
2015
Molecular classification of basal cell carcinoma of skin by gene expression profiling. Jee BA, Lim H, Kwon SM, Jo Y, Park MC, Lee IJ*, Woo HG* Mol Carcinog. 2015 Dec;54(12):1605-12. PMID:25328065 (*co-corresponding)
Tumor suppressive effect of PARP1 and FOXO3A in gastric cancers and its clinical implications. Park SH, Jang KY, Kim MJ, Yoon S, Jo Y, Kwon SM, Kim KM, Kwon KS, Kim CY, Woo HG Oncotarget. 2015 Dec 29;6(42):44819-31. PMID:26540566
Recurrent Glioblastomas Reveal Molecular Subtypes Associated with Mechanistic Implications of Drug-Resistance. Kwon SM, Kang SH, Park CK, Jung S, Park ES, Lee JS, Kim SH, Woo HG PLoS One. 2015;10(10):e0140528. PMID:26466313
Identification of a mitochondrial defect gene signature reveals NUPR1 as a key regulator of liver cancer progression. Lee YK, Jee BA, Kwon SM, Yoon YS, Xu WG, Wang HJ, Wang XW, Thorgeirsson SS, Lee JS, Woo HG*, Yoon G* Hepatology. 2015 Oct;62(4):1174-89. PMID:26173068 (*co-corresponding)
Mitochondrial defect-responsive gene signature in liver-cancer progression. Lee YK, Woo HG, Yoon G BMB Rep. 2015 Nov;48(11):597-8. PMID:26350749
CDH13 and HCRTR2 May Be Associated with Hypersomnia Symptom of Bipolar Depression: A Genome-Wide Functional Enrichment Pathway Analysis. Cho CH, Lee HJ, Woo HG, Choi JH, Greenwood TA, Kelsoe JR Psychiatry Investig. 2015 Jul;12(3):402-7. PMID:26207136
2014
Profiling of Exome Mutations Associated with Progression of HBV-Related Hepatocellular Carcinoma. Woo HG, Kim SS, Cho H, Kwon SM, Cho HJ, Ahn SJ, Park ES, Lee J, Cho SW, Cheong JY PLoS One. 2014;9(12):e115152. PMID:25521761
Role of cysteinyl leukotriene signaling in a mouse model of noise-induced cochlear injury. Park JS, Kang SJ, Seo MK, Jou I, Woo HG, Park SM Proc Natl Acad Sci U S A. 2014 Jul 8;111(27):9911-6. PMID:24958862
A microchip filter device incorporating slit arrays and 3-D flow for detection of circulating tumor cells using CAV1-EpCAM conjugated microbeads. Kim YJ, Koo GB, Lee JY, Moon HS, Kim DG, Lee DG, Lee JY, Oh JH, Park JM, Kim MS, Woo HG, Kim SI, Kang P, Choi W, Sim TS, Park WY, Lee JG, Kim YS Biomaterials. 2014 Aug;35(26):7501-10. PMID:24917030
2013
Implications of time-series gene expression profiles of replicative senescence. Kim YM, Byun HO, Jee BA, Cho H, Seo YH, Kim YS, Park MH, Chung HY, Woo HG*, Yoon G* Aging Cell. 2013 Aug;12(4):622-34. PMID:23590226 (*co-corresponding)
Genomic copy number alterations with transcriptional deregulation at 6p identify an aggressive HCC phenotype. Kwon SM, Kim DS, Won NH, Park SJ, Chwae YJ, Kang HC, Lee SH, Baik EJ, Thorgeirsson SS*, Woo HG* Carcinogenesis. 2013 Jul;34(7):1543-50. PMID:23508637 (*co-corresponding) cited by
A genome-wide association study of seasonal pattern mania identifies NF1A as a possible susceptibility gene for bipolar disorder. Lee HJ*, Woo HG*, Greenwood TA, Kripke DF, Kelsoe JR J Affect Disord. 2013 Feb 20;145(2):200-7. PMID:22925353 (*equally contributed)
Patient-specific orthotopic glioblastoma xenograft models recapitulate the histopathology and biology of human glioblastomas in situ. Joo KM, Kim J, Jin J, Kim M, Seol HJ, Muradov J, Yang H, Choi YL, Park WY, Kong DS, Lee JI, Ko YH, Woo HG, Lee J, Kim S, Nam DH Cell Rep. 2013 Jan 31;3(1):260-73. PMID:23333277
2012
Perspectives of integrative cancer genomics in next generation sequencing era. Kwon SM, Cho H, Choi JH, Jee BA, Jo Y, Woo HG Genomics Inform. 2012 Jun;10(2):69-73. PMID:23105932
Transcriptomic profiling reveals hepatic stem-like gene signatures and interplay of miR-200c and epithelial-mesenchymal transition in intrahepatic cholangiocarcinoma. Oishi N, Kumar MR, Roessler S, Ji J, Forgues M, Budhu A, Zhao X, Andersen JB, Ye QH, Jia HL, Qin LX, Yamashita T, Woo HG, Kim YJ, Kaneko S, Tang ZY, Thorgeirsson SS, Wang XW Hepatology. 2012 Nov;56(5):1792-803. PMID:22707408
A fibrous stromal component in hepatocellular carcinoma reveals a cholangiocarcinoma-like gene expression trait and epithelial-mesenchymal transition. Seok JY*, Na DC*, Woo HG*, Roncalli M, Kwon SM, Yoo JE, Ahn EY, Kim GI, Choi JS, Kim YB, Park YN Hepatology. 2012 Jun;55(6):1776-86. PMID:22234953 (*equally contributed)
2011
Cross-species hybridization of microarrays for studying tumor transcriptome of brain metastasis. Park ES, Kim SJ, Kim SW, Yoon SL, Leem SH, Kim SB, Kim SM, Park YY, Cheong JH, Woo HG, Mills GB, Fidler IJ, Lee JS Proc Natl Acad Sci U S A. 2011 Oct 18;108(42):17456-61. PMID:21987811
Exploring genomic profiles of hepatocellular carcinoma. Woo HG, Park ES, Thorgeirsson SS, Kim YJ Mol Carcinog. 2011 Apr;50(4):235-43. PMID:21465573
Association of TP53 mutations with stem cell-like gene expression and survival of patients with hepatocellular carcinoma. Woo HG, Wang XW, Budhu A, Kim YH, Kwon SM, Tang ZY, Sun Z, Harris CC, Thorgeirsson SS Gastroenterology. 2011 Mar;140(3):1063-70. PMID:21094160
2010
Differential regulation of proliferation and differentiation in neural precursor cells by the Jak pathway. Kim YH, Chung JI, Woo HG, Jung YS, Lee SH, Moon CH, Suh-Kim H, Baik EJ Stem Cells. 2010 Oct;28(10):1816-28. PMID:20979137
Definition of ubiquitination modulator COP1 as a novel therapeutic target in human hepatocellular carcinoma. Lee YH, Andersen JB, Song HT, Judge AD, Seo D, Ishikawa T, Marquardt JU, Kitade M, Durkin ME, Raggi C, Woo HG, Conner EA, Avital I, Maclachlan I, Factor VM, Thorgeirsson SS Cancer Res. 2010 Nov 1;70(21):8264-9. PMID:20959491
Identification of a cholangiocarcinoma-like gene expression trait in hepatocellular carcinoma. Woo HG, Lee JH, Yoon JH, Kim CY, Lee HS, Jang JJ, Yi NJ, Suh KS, Lee KU, Park ES, Thorgeirsson SS, Kim YJ Cancer Res. 2010 Apr 15;70(8):3034-41. PMID:20395200
Integrative analysis of proteomic signatures, mutations, and drug responsiveness in the NCI 60 cancer cell line set. Park ES, Rabinovsky R, Carey M, Hennessy BT, Agarwal R, Liu W, Ju Z, Deng W, Lu Y, Woo HG, Kim SB, Cheong JH, Garraway LA, Weinstein JN, Mills GB, Lee JS, Davies MA Mol Cancer Ther. 2010 Feb;9(2):257-67. PMID:20124458
2009
Identification of potential driver genes in human liver carcinoma by genomewide screening. Woo HG*, Park ES*, Lee JS*, Lee YH, Ishikawa T, Kim YJ, Thorgeirsson SS Cancer Res. 2009 May 1;69(9):4059-66. PMID:19366792 (*equally contributed)
Central role of c-Myc during malignant conversion in human hepatocarcinogenesis. Kaposi-Novak P, Libbrecht L, Woo HG, Lee YH, Sears NC, Coulouarn C, Conner EA, Factor VM, Roskams T, Thorgeirsson SS Cancer Res. 2009 Apr 1;69(7):2775-82. PMID:19276364
2008
Gene expression-based recurrence prediction of hepatitis B virus-related human hepatocellular carcinoma. Woo HG, Park ES, Cheon JH, Kim JH, Lee JS, Park BJ, Kim W, Park SC, Chung YJ, Kim BG, Yoon JH, Lee HS, Kim CY, Yi NJ, Suh KS, Lee KU, Chu IS, Roskams T, Thorgeirsson SS, Kim YJ Clin Cancer Res. 2008 Apr 1;14(7):2056-64. PMID:18381945
2007
GS2PATH: a web-based integrated analysis tool for finding functional relationships using gene ontology and biochemical pathway data. Yang JO, Charny P, Lee B, Kim S, Bhak J, Woo HG Bioinformation. 2007 Dec 30;2(5):194-6. PMID:18305828
Gene expression profiling reveals different pathways related to Abl and other genes that cooperate with c-Myc in a model of plasma cell neoplasia. Park ES, Shaughnessy JD Jr, Gupta S, Wang H, Lee JS, Woo HG, Zhan F, Owens JD Jr, Potter M, Janz S, Mushinski JF BMC Genomics. 2007 Aug 31;8():302. PMID:17764563
GAzer: gene set analyzer. Kim SB, Yang S, Kim SK, Kim SC, Woo HG, Volsky DJ, Kim SY, Chu IS Bioinformatics. 2007 Jul 1;23(13):1697-9. PMID:17468122
Heterologous tissue culture expression signature predicts human breast cancer prognosis. Park ES, Lee JS, Woo HG, Zhan F, Shih JH, Shaughnessy JD Jr, Frederic Mushinski J PLoS One. 2007 Jan 3;2(1):e145. PMID:17206280