Liz's wibblings on life as a Plant Scientist
For recent news/comments, see also my Twitter feed: @LizRylott
5 December 2022
I'm asked a few Qs by an curious undergraduate student at the University of Bristol...
What makes you fascinated by plant science, specifically phytoremediation?
I grew up on a tulip farm in the Lincolnshire fens. and have always loved plants. And this is a weird admission, but growing up I used to love the texture and characteristics of the soil there. It's amazing stuff, crumbly, rich chocolate brown. Smells good too! I know I'm in a huge group of people that are eternally amazed when a seed sprouts into a plant. Especially if we've nurtured it into doing this. And then, wow, there are so many different types of plant out there! Leaves, flowers, towering trees, and all the funny wacky stuff you learn they do. Poking a finger into a pitcher plant, pinging a long spine on a cactus (it is possible to play tunes this way, try 'Happy Birthday' on an Echinocactus grusonii). The joy of finding a shiny conker from its casing- there is no-one alive on the planet who doesn't like this. As a kid, running around at Halloween astride a witch's broom made of pampas grass. The existence of bananas! Brazil nuts nestled in their shell like a Terry's chocolate orange!, Cocoa pods - incredible. I was once given a pod to freeze-dry as a specimen (the owner sent a replica in chocolate as a thank you. Happy Days!). What about bullrushes?! Autumn leaves, pulling the sheath back on a corn-on-the-cob, cycling past a field of sunflowers? Sitting with my great grandma, shelling perfect pearly peas from giant hessian bags, riding on a tulip-encrusted float at Spalding tulip parade, digging potatoes up (ok just a few - I've worked on a commercial potato picker and it can be hard to retain the enjoyment). But this is a joy ALL kids love, and we shouldn't ever lose this.
What was your career path?
I was always told to 'study what you love'. I love plants and wanted a career working with them. My careers' adviser at school suggested I get work in the horticultural trade. He meant propagating and selling plants, a relatively common career path in the Fens where I grew up. You start with a poly tunnel, choose a few species to cover the seasons - maybe spring daffodils, summer bedding plants and cut flower chrysanthemums in the autumn. Access to nearby plant auction rooms, and long hours of hard work whenever the season peaks. It's a good living, and when you know about the miracles of plant propagation, it has its beauty. But I knew I wanted something more, and neither I, nor my careers' teacher, could think what it would be called.
When I saw a 4-year course called 'Applied plant science' at Manchester university, I knew I'd found it. A glorious mix of plant biochemistry, molecular biology, genetics and agriculture, although biotech was still in its infancy (Monsanto did not release the Flavr Savr Tomato until 1994). My year out at the Jealott's Hill Syngenta site (called ICI at the time) enabled me to biotech trailblaze on one of the first UK GM field trials, analysing herbicide-resistant oilseed rape. I graduated with plant science knowledge, but no career advice whatsoever. Near the end of the last term, the inspiring, and caring lecturer Prof Mike Eames, told me that a Dr Stephen Rawsthorne was advertising a Gatsby Charitable Foundation-funded studentship.The charity was founded by David Sainsbury, and the project involved working on photosynthesis in GM C3-C4 intermediate plants at the John Innes Centre. I had not a clue about who, what or where, but was definitely curious. Visits and a very enjoyable interview at Oxford followed, then I began my studentship; I had no idea how well I'd landed on my feet. As one of the first Gatsby plant science students, and they have funded every year since, both Gatsby and I were still very much shaping the future format. I was given advice about public speaking (those who know me now, and struggle to get a word in edgeways with a fish-slice, will be amused to know I was terrified about speaking in public), and attended daunting mini conferences in posh places, with scary, important people. I started to feel I was out of my depth, and not worthy, imposter syndrome?
After my PhD, I knew I wanted to work on C4 photosynthesis. There's something dead clever about the whole physiology and biochemistry of the C4 set up that really excited me. And I wanted to work with Prof Hugh Nimmo in Glasgow. I'd met him at a Gatsby meeting (I think), and thought he was brilliant (he is)! I sent him my cv, and although he declined, he kindly passed it on to a young upstart: Dr Ian Graham. Ian was the Bright Young Thing with Monsanto funding, he took me on, I suspect based on my Gatsby credentials alone (he later told me my cover letter was rubbish). I worked with Ian on a Monsanto-funded project on seed germination, then a second postdoc followed, and when Ian moved down to York to help set up the Centre for Novel Agricultural Products (CNAP), I moved too.
At this point in my career, I was beginning to feel more than a little desperate. No career advice was forthcoming, and it seemed to me that I just needed 'some good papers', so I put my head down...and maybe forgot to look up?
A few years later, Dr, now Prof, Neil Bruce came up from Cambridge to deliver an amazing talk on GM plants that could break down explosives on military training ranges. Pun probably intended; it lit the fuse! I realised I had become disengaged with the research on seed germination; the science seemed to be spiraling into a dense bog of regulator genes with conflicting ideas and, to me, an unclear path forward. 'Omics research was showing promise, but this wasn't a direction I wanted to go. Neil moved his research up to York, and I popped up to chat about a four year position he was advertising. Despite being in the Scouting movement, I was foolishly unprepared for the on-the-spot interview this became, but somehow managed to secure the job. I started to feel I had some control and direction; I 'just' needed to get a 'few more good papers out'. Publications in Science, Nat. Biotech and other leading journals followed. I got married, had a couple of kids and probably finally grew up(ish). Neil was a fabulous and supportive boss, and career development for postdoctoral researchers had grown and embedded. (I'm proud to have had a small role in this on various committees from the Roberts review for postgraduate researcher career development in 2002 onwards). But my position was not good. I felt geographically tied to York, family were here, and reluctant to move again. York is a Russell Group university, lectureship positions are prestigious and highly competitive; internal candidates were not favoured. A senior researcher now, I was a group manager, running numerous projects, supervising students, writing grants. I was on university committees, journal editorial boards, an invited speaker at international conferences, but feeling like the fraud lawyer Mike in Netflix 's Suits; I was a not an independent academic. I needed to develop my own research area, on top of my day job...
One thing in my research area that increasingly bugged me was the 'miracle' use of plants to remediate toxic levels of low value metals such as cadmium, zinc and lead from polluted soils. Hurrah, we are all saved! But where does the toxic metal-rich biomass go? Under the wallpaper in a Banky? I started to research uses for metal-rich biomass. Together with wonderful colleagues in the Green Chemistry Centre of Excellence, here at York, we looked at catalytically-active metals like nickel, and started to see results. I applied as PI for short-term funding (as a contract researcher, grants had to finish before my own current contract ended). Excited, and engaged with the science, I started to whip up my research area.
One thing that academics do is teach. This fact is obvious, but historically, university researchers have been separated and hidden from the everyday teaching of undergraduate students. Times changed, and part-time positions became available designed to give postdoc researchers experience in teaching at York. I rolled up my sleeves and did all the preparation I could think of to secure one of these positions. When I really really want something, like Veruca Salt I can find incredible focus. Beginning the teaching role, I had an epiphany. What on earth had I been missing, right under my nose, all this time?! Enthusing and teaching students is one of the biggest privileges and joys out there. I utterly loved it. And wanted more. It was only a couple more years before lectureship positions at York were advertised. I had been a
Dipterocarp seedling on the forest floor, and when that sunlight came, it was my beanstalk moment.
I am now a senior lecturer at York, but should have done this a lot sooner: Walking the walk builds confidence, and trying new stuff rejuvenates. If you're not where you want to be, don't wait on the forest floor (even banana trees can walk...).
What do you think the most important skills for a plant scientist are?
Oh this is easy: communication! Bring people together, talk (ideally over a nice Vicky sponge). I know a little about lots of different things and want to bring others together to help me achieve the bigger picture. Hard lab skills and techniques change all the time, we have a new machine for protein purification. I don't know how to use it...but I know someone who does.
I know my weaknesses - I'm unlikely to ever read a manual before starting something, and careful, repetitive tasks with long-term focus could be an issue (brain surgeon def a career no no). I put my foot in my mouth often, and dig socially awkward holes like a rabbit. But I'm tremendously happy (and amused that enthusiasm is a strength and, to some, an unbelievable annoyance!), and I'm doing what I love.
Carrots for carrats!
Article from the BBC showing that carrots can be used to remediate gold.
16 August 2017
30 July 2017
Open Day for our GM field trail - our explosive-eating GM switchgrasses are cleaning up contaminated soil!
26th June
Some great talks at the BioBio2017 conference in Prague. The city's not bad either!
22 March 2017
Just out, an interview by Holly Esquire for The Conversation on our research into understanding how plants can be used to phytomine rare and precious metals. Link to interview here.
23 February 2017
Our research just highlighted in GARNet's community blog:
17 February 2017
Whoopee! Our latest paper just out: 'Towards financially viable phytoextraction and production of plant-based palladium catalysts'. Harumain ZA, Parker HL, Muñoz García A, Austin MJ, McElroy CR, Hunt AJ, Clark JH, Meech JA, Anderson CW, Ciacci L, Graedel TE, Bruce NC, Rylott EL. Environ Sci Technol. 2017 Feb 13. doi: 10.1021/acs.est.6b04821
2 February 2017
Neil and I talking about our explosive-eating plants- we're on the telly! Many thanks Hannah King at Forces TV (@FTVHan) http://forces.tv/67432296
22 December 2016
Our latest paper just out 'Structural evidence for Arabidopsis glutathione transferase AtGSTF2 functioning as a transporter of small organic ligands.
Ahmad L, Rylott EL, Bruce NC, Edwards R, Grogan G.
FEBS Open Bio. 2016 Dec 22;7(2):122-132. doi: 10.1002/2211-5463.12168.'. Download a copy here
7 December 2016
Our paper 'Expression of a Drosophila glutathione transferase in Arabidopsis confers the ability to detoxify the environmental pollutant, and explosive, 2,4,6-trinitrotoluene'
Kyriakos Tzafestas, Maria M. Razalan, Ivan Gyulev, Aslam M. A. Mazari, Bengt Mannervik, Elizabeth L. Rylott, Neil C. Bruce
Has just been published Open Access in New Phytologist.
More
17 November 2016
Our paper 'Expression in grasses of multiple transgenes for degradation of munitions compounds on live fire training ranges'
Long Zhang, Ryan Routsong, Quyen Nguyen, Elizabeth L. Rylott, Neil C. Bruce and Stuart E. Strand
Has just been published Open Access in Plant Biotechnology Journal.
Download here.
16 November 2016
I presented 'Explosives and the Disarming Power of Plants' at Northallerton School.
What a lovely, welcoming and enthusiastic audience and some clever questions from the school kids.
Thanks to Anna Cox, at the school, for inviting me.
September 2016
A great International Phytotechnologies Conference : Plant-Based Solutions for Environmental Problems from Lab to Field, in Hangzhou, China.
Thank you to the wonderful organisers
Photo below (I'm 18th from RHS!)
Wednesday 7th September 2016
Come and listen to my talk " EXPLOSIVES AND THE DISARMING POWER OF PLANTS" at this month's Cafe Scientifique York. Organised by the Yorkshire Philosophical Society and now at Friargate Quaker Meeting House, Friargate, YO19RL (original City Screen venue flooded).
14-27 June 2016
Workshops and presentations in Massey and Dunedin Universities as part of MBIE Partnerships funding on the Phytocat project
23 May 2016
A warm welcome to Laura Faas, helping out on the BBSRC NIBB project.
28 April 2016
A sad goodbye, huge thank you and congratulations to Dr Emily Johnson moving on the the group with her shiny new PhD!
14 April 2016
Meeting with Miscanthus Nurseries, Taunton
This is the plant to phytomine with!
Attending 2nd Expert Workshop Bergwerk Pflanze
University of Life Sciences (BOKU)
22 March 2016
Presenting 'The chemical biology behind the phytotoxicity of the environmental pollutant and explosive 2,4,6 trinitrotoluene' at the Biological Physical Sciences Institute (BPSI) symposium ‘Chemical Biology at the physical-life sciences interface’, York.
20 January 2016
19 January 2016
An update on our GM field trial: pending a site visit, we have our permit to go ahead with the trial this spring.
For photos and details follow the SCIENCE FOR THE WIDER AUDIENCE link, or paste the link below:
https://sites.google.com/a/york.ac.uk/liz-rylott/home/wider-audience/a-gm-approach-using-plants-to-detoxify-explosives
15 September 2015
A warm welcome to Dr Thierry Tonon who has just joined CNAP from the Station Biologique de Roscoff, France
Thierry studies marine algae: Thierry's Research gate profile
7-8th September GARNet-OpenPlant CRISPR-Cas Workshop
Monodehydroascorbate reductase mediates TNT toxicity in plants
Emily J. Johnston*, Elizabeth L. Rylott1*†, Emily Beynon, Astrid Lorenz, Victor Chechik, Neil C. Bruce,†
*joint first authors,† joint corresponding authors
Science 4 September 2015:
Vol. 349 no. 6252 pp. 1072-1075
DOI: 10.1126/science.aab3472
22:30pm 3 September 2015
Our paper explaining why TNT is toxic to plants is out in Science!
with commentary too:
PLANT BIOCHEMISTRY- Lighting the fuse on toxic TNT
Graham Noctor
Science 4 September 2015:
Vol. 349 no. 6252 pp. 1052-1053
DOI: 10.1126/science.aad0941
http://www.sciencemag.org/content/349/6252/1052.summary
20 August 2015
New publication out!
Rylott EL, Johnston EJ and Bruce NC (2015) Advances in Transgenic Phytoremediation Technologies for Persistent Organic Pollutants Invited Darwin Review for J. Exp. Bot. doi: 10.1093/jxb/erv384
Link to J. Exp Bot article (subscription required): http://jxb.oxfordjournals.org/cgi/content/full/erv384?ijkey=401trOPPvLAdOfz&keytype=ref
Metals in Biology Network POC review panel and the BBSRC have agreed to fund:
Tailoring the in planta synthesis of specific nanoparticles for production of high-value catalysts
21 May 2015
10 February 2015
New publication out!
Rylott EL, Gunning V, Tzafestas K, Sparrow H, Johnston EJ, Brentnall A, Potts JR, and Bruce NC (2014) Phytodetoxification of the environmental pollutant and explosive 2,4,6-trinitrotoluene. Addendum Plant Signal Behav. 10:1, e977714, DOI: 10.4161/15592324.2014.977714
Download from here: http://www.tandfonline.com/eprint/5GYyGwr4j9UgehR6mybz/full
15 October 2014
Speakers confirmed for Plant Biotechnology session on Tuesday 30th June
at the SEB Annual Meeting 30th June – 3rd July 2015
Session Chairs: Liz Rylott (University of York) & Cristobal Uauy (John Innes Centre)
Cathie Martin (John Innes Centre)
Alison Smith (University of Cambridge)
John Pickett (Rothamsted Research)
Peter Eastmond (Rothamsted Research)
5th September 2014
University of York's Green Chemistry Centre of Excellence Grand Opening
by Ellen MacArthur. Relevant???!!!
No really- The Ellen MacArthur Foundation works in education, business innovation and analysis to accelerate the transition to a circular economy.
Inspiring stuff.
10 September 2014
Our field trial studies using GM, explosive-detoxifying switchgrass plants makes BBSRC front page:
1 April 2014
Presentation at UK PlantSci Conference, York
"Plant Cillit Bang! And the dirt is gone! Using TNT to understand detoxification of organic pollutants by plants"
Watch video on the Journal of Experimental Botany website
17 February
Sarah Blackford wrote a lovely Spotlight article in SEB March 2014 Bulletin
(Thanks Sarah)
13 February 2014
One of nine short-listed finalists for the 2014 BBSRC Innovator of the Year!
Neil Bruce and team, University of York – Engineering plants for the remediation of explosives pollution