Notes on software
I use a variety of software packages, and tend to put together notes while I'm climbing up the learning curve. They are very casual "notes to self" kind of thing and not at all a general tutorial. I'm posting them for my own reference and in case they could be helpful for others.
- Freesurfer, for segmenting anatomies: my notes and the official help
- AFNI, for analyzing fMRI data, and SUMA for surface based analysis: my notes and the official help
- FSL, another way of analyzing fMRI data
- Mercurial, a version control system: my notes and the official help
- SurfRelax, another way to segment anatomies: my notes and the official help