Publications
Niu's research has been partly supported by
University of Arizona Faculty Seed Grant
National Science Foundation (NSF)
United States Department of Agriculture (USDA)
1. Fan, J. and Niu, Y. (2007). Selection and validation of normalization methods for c-DNA
microarrays using within-array replications. Bioinformatics, 23, 2391-2398. PDF
2. Fan, J., Feng, Y. and Niu, Y. S. (2010) Nonparametric estimation of genewise variance for cDNA
microarray data. The Annals of Statistics , 38, 2723-2750. PDF
3. Niu, Y. S., Hao, N. and An, L. (2011) Detection of rare functional variants using group ISIS,
BMC Proceedings, 5 (Suppl 9):S108. PDF
4. Bailey-Wilson, J.E., Brennan, J.S., Culverhouse, R., Kim, Y., Jiang, Y., Jung, J., Li, Q.,
Lamina, C., Liu, Y., Magi, R., Niu, Y.S., Saccone, N., Schlosberg, C., Wang, L., Yilmaz, Y.E.,
Zhang, H. and Zhang, Z. (2011) Regression and Data Mining Methods for Analyses of Multiple
Rare Variants in GAW17 Mini-exome Data. Genetic epidemiology 35.S1: S92-S100. PDF
5. Niu, Y. S. and Zhang, H. (2012) The Screening and Ranking Algorithm to Detect DNA Copy
Number Variations, The Annals of Applied Statistics, 6, 1306-1326. PDF; R package SaRa
6. Hao, N., Niu, Y. S. and Zhang, H. (2013) Multiple change-point detection via a screening and
ranking algorithm, Statistica Sinica, 1553-1572. PDF
7. Niu, Y.S., Hao, N. and Zhang, H. (2016) Multiple Change-point Detection: a Selective Overview,
Statistical Science, 31, 611-623. PDF
8. Xiao, F., Niu, Y.S., Hao, N., Xu, Y., Jin, Z. and Zhang, H. (2017) modSaRa: a computationally
efficient R package for CNV identi.cation, Bioinformatics, btx212. PDF; R package modSaRa
9. Suh, J.H., Niu, Y.S., Hung W-L, Ho C.-T., Wang, Y. (2017) Lipidomic analysis for carbonyl
species derived from fish oil using liquid chromatography-tandem mass spectrometry. Talanta,
168, 31-42. PDF
10. Niu, Y.S., Hao, N. and Dong B. (2018) A New Reduced-Rank Linear Discriminant Analysis
Method and Its Applications, Statistica Sinica, 28, 189-202. PDF; R package SPCALDA
11. Niu, Y.S., Hao, N. and Zhang, H. H. (2018) Interaction screening by partial correlation,
Statistics and Its Interface, 11, 317-325. PDF
12. Suh, J.H., Niu, Y.S. , Wang, Z., Gmitter F. and Wang Y. (2018) Metabolic analysis reveals altered
long-chain fatty acid metabolism in the host by Huanglongbing disease, Journal of agricultural and food chemistry
66(5), 1296-1304. PDF
13. Xiao, F., Luo, X., Hao, N., Niu, Y.S., Xiao, X., Cai, G., Amos, C.I., Zhang, H. (2019) Accurate and Powerful Method for Copy Number Variation Detection, Bioinformatics, accepted.