Publications

Niu's research has been partly supported by

University of Arizona Faculty Seed Grant

National Science Foundation (NSF)

United States Department of Agriculture (USDA)

1. Fan, J. and Niu, Y. (2007). Selection and validation of normalization methods for c-DNA

microarrays using within-array replications. Bioinformatics, 23, 2391-2398. PDF

2. Fan, J., Feng, Y. and Niu, Y. S. (2010) Nonparametric estimation of genewise variance for cDNA

microarray data. The Annals of Statistics , 38, 2723-2750. PDF

3. Niu, Y. S., Hao, N. and An, L. (2011) Detection of rare functional variants using group ISIS,

BMC Proceedings, 5 (Suppl 9):S108. PDF

4. Bailey-Wilson, J.E., Brennan, J.S., Culverhouse, R., Kim, Y., Jiang, Y., Jung, J., Li, Q.,

Lamina, C., Liu, Y., Magi, R., Niu, Y.S., Saccone, N., Schlosberg, C., Wang, L., Yilmaz, Y.E.,

Zhang, H. and Zhang, Z. (2011) Regression and Data Mining Methods for Analyses of Multiple

Rare Variants in GAW17 Mini-exome Data. Genetic epidemiology 35.S1: S92-S100. PDF

5. Niu, Y. S. and Zhang, H. (2012) The Screening and Ranking Algorithm to Detect DNA Copy

Number Variations, The Annals of Applied Statistics, 6, 1306-1326. PDF; R package SaRa

6. Hao, N., Niu, Y. S. and Zhang, H. (2013) Multiple change-point detection via a screening and

ranking algorithm, Statistica Sinica, 1553-1572. PDF

7. Niu, Y.S., Hao, N. and Zhang, H. (2016) Multiple Change-point Detection: a Selective Overview,

Statistical Science, 31, 611-623. PDF

8. Xiao, F., Niu, Y.S., Hao, N., Xu, Y., Jin, Z. and Zhang, H. (2017) modSaRa: a computationally

efficient R package for CNV identi.cation, Bioinformatics, btx212. PDF; R package modSaRa

9. Suh, J.H., Niu, Y.S., Hung W-L, Ho C.-T., Wang, Y. (2017) Lipidomic analysis for carbonyl

species derived from fish oil using liquid chromatography-tandem mass spectrometry. Talanta,

168, 31-42. PDF

10. Niu, Y.S., Hao, N. and Dong B. (2018) A New Reduced-Rank Linear Discriminant Analysis

Method and Its Applications, Statistica Sinica, 28, 189-202. PDF; R package SPCALDA

11. Niu, Y.S., Hao, N. and Zhang, H. H. (2018) Interaction screening by partial correlation,

Statistics and Its Interface, 11, 317-325. PDF

12. Suh, J.H., Niu, Y.S. , Wang, Z., Gmitter F. and Wang Y. (2018) Metabolic analysis reveals altered

long-chain fatty acid metabolism in the host by Huanglongbing disease, Journal of agricultural and food chemistry

66(5), 1296-1304. PDF

13. Xiao, F., Luo, X., Hao, N., Niu, Y.S., Xiao, X., Cai, G., Amos, C.I., Zhang, H. (2019) Accurate and Powerful Method for Copy Number Variation Detection, Bioinformatics, accepted.