Research

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Quantitatively characterize and predict microbial eco-evolutionary dynamics and biogeochemistry in a changing environment

Novel Microbes and unexpected metabolisms in the environment

Microbes in ocean, estuaries

Novel microbes and unexpected niche differentiation challenge existing estimates of the nitrogen budget

Biogeochemical Cycles Governing Global Climate

Nitrogen cycle, greenhouse gases

New process in the nitrogen cycle

Determination of missing key kinetics parameters of biogeochemical processes

Novel modeling frameworks with explicit microbial functional types resolving nitrogen dynamics

Novel frameworks predict microbial diversity under global changes

Ecological theories, novel models

General rules behind microbial diversity and coexistence

Novel theoretical frameworks and ecosystem models with microbial functional types

Getting to know microbes:

DNA and RNA on filters collected from the Pacific ocean
DNA and RNA extraction
Enriching microbes with a bioreactor in Prof. Sebastian Lücker's lab at Radboud University)
Monitoring nutrients in the bioreactor
Counting colonies on an agar plate
Gene amplification with PCR
DNA purification from a gel

Exploring biogeochemical cycles:

Media for denitrifiers
pH adjustment for samples
Replacing air with helium
Running mass spectrometer
One of my 4,000 samples

Linking microbes and biogeochemical cycles via building theoretical and modeling frameworks