Publications
Books
– Duperron S, Halary S, Bouly JP, Roussel T, Hugoni M, Bruto M, Oger P, Duval C, Woo A, Jézéquel D, Ader M, Leboulanger C, Agogué H, Grossi V, Troussellier M, Bernard C (2024) Transcriptomic insights into the dominance of two phototrophs throughout the water column of a tropical hypersaline-alkaline crater lake (Dziani Dzaha, Mayotte). Frontiers Microbiol 15:1368523. 10.3389/fmicb.2024.1368523
– Halary S, Duval C, Marie B, Bernard C, Piquet B, Gros O, Bourguet-Kondracki ML, Duperron S (2024) Genomes of nine biofilm-forming filamentous strains of Cyanobacteria (genera Jaaginema, Scytonema and Karukerafilum gen. nov.) isolated from mangrove habitats of Guadeloupe (Lesser Antilles). FEMS Microbes 5:1-13. doi.org/10.1093/femsmc/xtad024
– Béziat N, Duperron S, Gros O (2024) Environmental transmission of symbionts in the mangrove crabs Aratus pisonii and Minuca rapax: acquisition of the bacterial community through larval development to juvenile stage. Microorganisms 12, 652 (IF=4.9)
-Duperron S, Foucault P, Duval C, Goto M, Gallet A, Colas S, Marie B (2023) Multi-omics analyses from a single sample: Prior metabolite extraction does not alter the 16S rRNA-based characterization of prokaryotic community in a diversity of sample types; FEMS Microbiol. Lett. 370, 1-6 DOI: 10.1093/femsle/fnad125
-Bruto M, Oger PM, Got P, Bernard C, Melayah D, Cloarec LA, Duval C, Escalas A, Duperron S, Lacombe M, Guigard L, Leboulanger C, Ader M, Sarazin G, Jézéquel D, Agogué H, Troussellier M, M. Hugoni (2023) Phytoplanktonic species in the haloalkaline Lake Dziani Dzaha select their archaeal microbiome. Molecular Ecology 32:6824–6838. DOI: 10.1111/mec.17179
– Wang H, Halary S, Duval C, Bernard C, Troussellier M, Beniddir MA, Brunel JM, Castaldi A, Caudal F, Golléty C, Martin C, Bourguet-Kondracki ML, Duperron S (2023) Diversity, metabolome profiling and bioactivities of benthic filamentous cyanobacteria isolated from coastal mangroves of Mayotte. Front. Mar. Sci. 10:1201594. doi: 10.3389/fmars.2023.1201594
– Halary S, Duperron S, Kim Tiam S, Duval C, Bernard C, Marie B (2023) Intra-population genomic diversity of the bloom-forming cyanobacterium, Aphanizomenon gracile, at low spatial scale. ISME Communications 3:57 doi: 10.1038/s43705-023-00263-3
– Massé A, Détang J, Duval C, Duperron S, Woo A, Domart-Coulon I (2023) Bacterial microbiota of Ostreobium, the coral-isolated chlorophyte ectosymbiont, at contrasted salinities. Microorganisms 11(5), 1318; https://doi.org/10.3390/microorganisms11051318
– Gallet A, Halary S, Duval C, Huet H, Duperron S*, Marie B* (2023) Disruption of fish gut microbiota composition and holobiont’s metabolome during a simulated Microcystis aeruginosa (Cyanobacteria) bloom; Microbiome 11:108 ; https://doi.org/10.1186/s40168-023-01558-2
– Halary S, Duperron S, Demay J, Duval C, Hamlaoui S, Piquet B, Reinhart A, Bernard C, Marie B (2022) Metagenome-based exploration of bacterial communities associated with cyanobacteria strains isolated from thermal muds. Microorganisms 10(12), 2337 https://doi.org/10.3390/microorganisms10122337
- Duval C, Marie B, Foucault P, Duperron S (2022) Establishment of the bacterial microbiota in a lab-reared model teleost fish, the medaka Oryzias latipes. Microorganisms 10, 2280. https://doi.org/10.3390/microorganisms10112280
- Halary S, Duperron S, Demay J, Duval C, Hamlaoui S, Piquet B, Reinhart A, Bernard C, Marie B (2022) Metagenome-based exploration of bacterial communities associated with cyanobacteria strains isolated from thermal muds. Microorganisms 10(12), 2337 https://doi.org/10.3390/microorganisms10122337
- Castaldi A, Teta R, Esposito G, Beniddir MA, de Voogd NJ, Duperron S, Costantino V, Bourguet-Kondracki M-L (2022) Computational metabolomics tools reveal Subarmigerides, unprecedented linear peptides from the marine sponge holobiont Callyspongia subarmigera. Mar. Drugs. 20, 673. https://doi.org/10.3390/md20110673
- Foucault P, Gallet A, Duval C, Marie B, Duperron S (2022) Gut microbiota and holobiont metabolome composition of the Medaka fish (Oryzias latipes) are affected by a short exposure to the cyanobacterium Microcystis aeruginosa. Aquat. Toxicol. https://doi.org/10.1016/j.aquatox.2022.106329
– Gallet A, Yao EK, Foucault P, Bernard C, Quiblier C, Humbert JF, Kalpy Coulibali J, Marie B, Duperron S (2022) Fish gut-associated bacterial communities in a tropical lagoon (Aghien lagoon, Ivory Coast). Front. Microbiol. doi: 10.3389/fmicb.2022.963456 (IF=6.0)
– Piquet B, Panse SL, Lallier F, Duperron S, Andersen AC (2022) "There and back again" Ultrastructural changes in the gills of Bathymodiolus vent-mussels during symbiont loss: back to a regular filter-feeding epidermis. Front. Mar. Sci. https://doi.org/10.3389/fmars.2022.968331 (IF=5.25)
– Hamlaoui S, Yeprémian C, Duval C, Marie B, Djédiat C, Piquet B, Bernard C, Duperron S (2022) The culture collection of cyanobacteria and microalgae at the French museum of Natural history: a century old but still alive and kicking! Cryptogamie Algologie 43(3):41-83 (IF=1.7) DOI: 10.5252/cryptogamie-algologie2022v43a3
– Béziat NS, Duperron S, Halary S, Azede C, Gros O (2021) First characterization of bacterial ectosymbionts colonizing gills of mangrove crabs; Symbiosis 85:105-114 DOI: 10.1007/s13199-021-00801-4
– Hourdez S, Boidin-Wichlaz C, Jollivet D , Massol F, Rayol MC, Bruno R, Zeppilli D, Thomas F, Lesven L, Billon G, Duperron S, Tasiemski A (2021) Investigation of Capitella spp. symbionts in the context of varying anthropic pressures: First occurrence of a transient advantageous epibiosis with the giant bacteria Thiomargarita sp. to survive seasonal increases of sulfides in sediments. Sci. Tot. Environ. 798:149149 https://doi.org/10.1016/j.scitotenv.2021.149149
– Jensen S, Frank JA, Arntzen MØ, Duperron S, Vaaje-Kolstad G, Hovland M (2021) Endozoicomonadaceae symbiont in gills of Acesta clam encodes genes for essential nutrients and polysaccharide degradation. FEMS Microbiol. Ecol. https://doi.org/10.1093/femsec/fiab070
– Duval C, Hamlaoui S, Piquet B, Toutirais G, Yéprémian C, Reinhardt A, Duperron S, Marie B, Demay J, Bernard C (2021) Diversity of cyanobacteria from thermal muds (Balaruc-Les-Bains, France) with the description of Pseudochroococcus couteii gen. nov, sp. nov. FEMS Microbes. Available at BiorXiv.org https://doi.org/10.1093/femsmc/xtab006
– Duperron S, Duval C, Hamlaoui S, Comte K, Yéprémian C, Bernard C (2021) La collection « cyanobactéries et microalgues » à l’heure des « -omics ». Les collections naturalistes dans la science du XXIe siècle; (ed. R. Pellens) ISTE éditions.
– Halary S, Duval C, Gallet A, Duperron S, Piquet B, Demay J, Bernard C, Marie B (2020) Draft genome of the toxic freshwater Microcystis aeruginosa strain PMC 728.11 (Cyanobacteria, Chroococcales). Microbiol. Res. Announcements 9:48:e01096-20 10.1128/MRA.01096-20.
– Piquet B, Lallier FH, André C, Shillito B, Andersen AC, Duperron S (2020) Regionalized cell proliferation in the symbiont-bearing gill of the hydrothermal vent mussel Bathymodiolus azoricus. Symbiosis 82(3):225-233 10.1007/s13199-020-00720-w (IF=1.78) Couverture du journal
– Bayon G, Lemaître N, Barrat JA, Wang X, Feng D, Duperron S. (2020) Microbial utilization of rare earth elements at cold seeps related to aerobic methane oxidation. Chemical Geology 555:119832. https://doi.org/10.1016/j.chemgeo.2020.119832 (IF=3.4).
– Duperron S, Halary S, Gallet A, Marie B (2020) Microbiome-aware ecotoxicology of organisms: relevance, pitfalls and challenges. Front. Public Health 8:407. doi: 10.3389/fpubh.2020.00407 (IF=2.5).
– Ruiz-Rodríguez M, Scheifler M, Sanchez-Brosseau S, Magnanou M, West N, Suzuki MT, Duperron S, Desdevises Y (2020) Host species and body site explain the variation in the microbiota associated to wild sympatric Mediterranean teleost fishes. Microb. Ecol. doi:10.1007/s00248-020-01484-y.
– Duperron S, Beniddir MA, Durand S, Longeon A, Duval C, Gros O, Bernard C, Bourguet-Kondracki ML (2020) New benthic Cyanobacteria from Guadeloupe mangroves as producers of antimicrobials. Mar. Drugs. 18, 16; doi:10.3390/md18010016
– Gallet A, Koubbi P, Léger N, Scheifler M, Ruiz-Rodrigues M, Suzuki M, Desdevises Y, Duperron S (2019) Low-diversity sbacterial microbiota in Southern Ocean representatives of lanternfish genera Electrona, Protomyctophum and Gymnoscopelus (family Myctophidae). PloS One. 14(12):e0226159. DOI :10.1371/journal.pone.0226159
– Scheifler M, Ruiz-Rodríguez M, Sanchez-Brosseau S, Magnanou M, Suzuki MT, West N, Duperron S, Desdevises Y (2019) Characterization of ecto- and endoparasite communities of wild Mediterranean teleosts by a metabarcoding approach. PloS One.14(9): e0221475
– Chapman A, Beaulieu B, Colaço A, Gebruk A, Hilario A, Kihara T, Ramirez-Llodra E, Sarrazin J, Tunnicliffe V, Amon D, Baker M, Boschen-Rose R, Chen C, Cooper I, Copley J, Corbari L, Cordes E, Cuvelier D, Duperron S, Du Preez C, Gollner S, Horton R, Hourdez S, Krylova E, Linse K, LokaBharathi PA, Marsh L, Matabos M, Mills S, Mullineaux L, Rapp HT, Reid W, Rybakova E, Thomas T, Southgate S, Stöhr S, Turner P, Watanabe H, Yasuhara M, Bates A. (in press) sFDvent: a global trait database for deep-sea hydrothermal vent fauna. Global Ecol Biogeogr. 2019;00:1–14.
– Duperron S, Habiballah M, Gallet A, Huet H, Duval C, Bernard C, Marie B (2019) First insights into the effect of toxin-containing cyanobacterial extracts on the gut microbiota of teleost fishes : a microcosm study on the medaka (Oryzias latipes). Environ. Sci. Tech. Lett. DOI :10.1021/acs.estlett.9b00297
– Duperron S, Gaudron SM, Laming SR (2019) A mussel’s life around deep-sea hydrothermal vents. Front. Young Minds. 7:76 DOI 10.3389/frym.2019.00076
– Piquet B, Shillito B, Lallier FH, Duperron S, Andersen AC (2019) High rates of apoptosis visualized in the symbiont-bearing gills of deep-sea Bathymodiolus mussels. PloS One 14(2):e0211499, DOI : 10.1371/journal.pone.0211499. (IF=2.8) Manuscript available from BiorXiv.
– Sen A, Duperron S, Hourdez S, Piquet B, Léger N, Gebruk A, Le Port AS, Svenning MM, Andersen A (2018) Cryptic frenulates are the dominant chemosymbiotrophic fauna at Arctic and high latitude Atlantic cold seeps. PloS One 13(2), e0209273. Doi : 10.1371/journal.pone.0209273
– Zbinden M, Gallet A, Szafranski K, Machon J, Ravaux J, Léger N, Duperron S. (2018) Blow your nose, shrimp ! Unexpectedly dense bacterial communities occur in the antennae and antennules of hydrothermal vent shrimp. Front. Mar. Sci. doi: 10.3389/fmars.2018.00357
– Laming S.R., Gaudron S.M., Duperron S. (2018) Lifecycle ecology of deep-sea chemosymbiotic mussels: a review. Front. Mar. Sci. 5:282, doi: 10.3389/fmars.2018.00282
– Hauton C., Brown A., Thatje S., Mestre N.C., Bebianno M., Martins I., Bettencourt R., Canals M., Sanchez-Vidal A., Shillito B., Ravaux J., Zbinden M., Duperron S., Mevenkamp L., Vanreusel A., Gambi C., Dell’Anno A., Danovaro R., Gunn V., Weaver P. (2017) Identifying toxic impacts of metals potentially released during deep-sea mining – a synthesis of the challenges to quantifying risk. Front. Mar. Sci. 4:388, doi: 10.3389/fmars.2017.00368
– Duperron S. (2017) Characterization of bacterial symbionts in deep-sea metazoans: protocols for conditioning, fluorescence in situ hybridization, and image analysis. Hydrocarbons and Lipid Microbiology Protocols (Eds: Mc Gentity TJ, Timmis KN, Nogales B), Springer. DOI: 10.1007/8623_2015_73
– Gaudron, S.M., Haga, T., Wand, H., Laming, S.R., Duperron, S. (2016) Plasticity in reproduction and nutrition in wood-boring bivalves (Xylophaga atlantica) from the Mid-Atlantic Ridge. Mar. Biol. 163: Doi:10.1007/s00227-016-2988-6
– Duperron, S., Gros, O. (2016) Colwellia and sulfur-oxidizing bacteria: an unusual dual symbiosis in a Terua mussel (Mytilidae: Bathymodiolinae) from whale falls in the Antilles arc. Deep-Sea Res. I.115:112-122; 10.1016/j.dsr.2016.05.012
– Duperron, S., Quiles, A., Szafranski, K.M., Léger, N., Shillito, B. (2016) Estimating symbiont abundances and gill surface areas in specimens of the hydrothermal vent mussel Bathymodiolus puteoserpentis maintained in pressure vessels. Front. Mar. Sci. doi:10.3389/fmars.2016.00016
- Laming, S.R., Duperron, S. (2015) A Correlative Light-Electron Microscopy (CLEM) protocol for the identification of bacteria in animal tissue, exemplified by methanotrophic symbionts of deep-sea mussels. Hydrocarbons and Lipid Microbiology Protocols (Eds: Mc Genity TJ, Timmis KN, Nogales B), Springer. DOI 10.1007/8623_2015_85
– Laming S.R., Szafranski, K.M., Rodrigues, CF., Gaudron, S.M., Cunha, M.R., Hilario, A., Le Bris N., Duperron, S. (2015) Fickle or faithful : the roles of host and environmental context in determining symbiont composition in two bathymodioline mussels. PLoS One 10(12): e0144307. doi:10.1371/journal.pone.014430
– Laming, S.R., Duperron, S., Gaudron, S.M., Hilario, A., Cunha, M.R. (2015) Adapted to change: the rapid development of symbiosis in newly settled, fast-maturing chemosymbiotic mussels in the deep-sea. Mar. Environ. Res. 112B:100-112 DOI: 10.1016/k.marenvres.2015.07.014
- Szafranski, K.M., Piquet, B., Shillito, B., Lallier, F.H., Duperron, S. (2015) Relative abundances of methane- and sulfur-oxidizing symbionts in gills of the deep-sea hydrothermal vents mussel Bathymodiolus azoricus under pressure. Deep-Sea Res. I 101:7-13.
- Gaudron, S.M., Marqué, L., Thiébaut, E., Riera, P., Duperron, S., Zbinden, M. (2015) How are microbial and detrital sources partitioning among and within gastropod species at East Pacific Rise hydrothermal vents? Mar. Ecol. 36:18-34
- Génio, L., Rodrigues, C.F., Guedes, I., Almeida, H., Duperron, S., Hilario, A. (2015) Mammal carcasses attract a swarm of mussels in the deep Atlantic: insights into colonization and biogeography of an organic-fall chemosymbiotic species. Mar. Ecol. 36:71-81 DOI: 10.1111/maec.12217
– Szafranski, K.M., Deschamps, P., Cunha, M.R., Gaudron, S.M., Duperron, S. (2015) Colonization of plant substrates at hydrothermal vents and cold seeps in the Northeast Atlantic and Mediterranean and occurrence of symbiont-related bacteria. Front. Microbiol. 6:162
- Zbinden, M., Marqué, L., Gaudron, S.M., Léger, N., Duperron,S. (2015) Epsilonproteobacteria as gill epibionts of the hydrothermal vent gastropod Cyathermia naticoides (North-East Pacific Rise) Mar. Biol. 162:435:448
- Rodrigues, C.F., Laming, S.R., Gaudron, S.M., Oliver, G., Le Bris, N., Duperron, S. (2015) A sad tale: has the small mussel Idas argenteus lost its symbionts? Biol. J. Linnean Soc. 114:398-405
- Duperron, S., Gaudron, S.M., Lemaitre, N., Bayon, G. (2014) A microbiological and biogeochemical investigation of the cold seep tubeworm Escarpia southwardae (Annelida: Siboglinidae): symbiosis and trace element composition of the tube. Deep-Sea Res. I 90:105-114
- Laming, S.R., Duperron, S., Cunha, M.R., Gaudron, S.M. (2014) Settled, symbiotic, then sexually mature: adaptive developmental anatomy in the deep-sea, chemosymbiotic mussel Idas modiolaeformis; Mar. Biol. 161:1319-1333.
- Szafranski, K., Gaudron, S.M., Duperron, S. (2014) Direct evidence for maternal inheritnce of bacterial symbionts in small deep-sea clams (Bivalvia: Vesicomyidae); Naturwissenschaften 101:373-383 (cover artwork)
- Oliver, P.G., Rodrigues, C.F., Carney, R., Duperron, S. (2013) Spinaxinus (Bivalvia: Thyasiroidea) from sulfide biogenerators in the Gulf of Mexico and hydrothermal vents in the Fiji Back Arc: chemosymbiosis and taxonomy; Scientia Marina 77:663-676.
- Holovachov, O., Rodrigues, C.F., Zbinden, M., Duperron, S. (2013) Trophomera conchicola sp. n.(Nematoda: Benthimermithidae) from chemosymbiotic bivalves Idas modiolaeformis and Lucinoma kazani (Mollusca: Mytilidae and Lucinidae) in Eastern Mediterranean. Russian J. Nematol. 21:1-12.
- Thubaut, J., Corbari, L., Gros, O., Duperron, S., Couloux, A., Samadi, S. (2013) Integrative biology of Idas iwaotakii (Habe, 1958), a 'model species' associated with sunken organic substrates. PLoS One 8(7), e69680.
– Decker C, Olu, K., Arnaud-Haond, S., Duperrons, S. (2013) Physical proximity may promote lateral acquisition bacterial symbionts in vesicomyid clams. PLoS One 8(7):e64830.
– Duperron, S., Gaudron, S.M., Rodrigues, C.F., Cunha, M.R., Decker, C., and Olu, K. (2013) An overview of chemosynthetic symbioses in bivalves from the North Atlantic and Mediterranean Sea. Biogeosciences, 10: 341-3267.
– Rodrigues, C.F., Cunha, M.R., Génio, L., Duperron, S. (2013) A complex picture of associations between two host mussels and symbiotic bacteria in the northeast Atlantic. Naturwissenschaften. 100: 21-31.
- Duperron, S., Pottier, M.A., Léger, N., Gaudron, S.M., Le Prieur, S., Sigwart, J.D., Ravaux, J., Zbinden, M. (2013) A tale of two chitons: is habitat specialisation linked to distiinct associated bacterial communities? FEMS Microbiol. Ecol. 82: 552-567.
– Duperron, S., Rodrigues, C.F., Léger, N., Szafranski, K., Decker, C., Olu, K., Gaudron, S.M. (2012) Diversity of symbioses between bacteria and metazoans at the Guiness cold seep site (Gulf of Guinea, West Africa). MicrobiologyOpen. 1: 467-480.
- Ritt, B., Duperron, S., Lorion, J., Lazar, C.S., Sarrazin, J. (2012) Integrative study of a new cold-seep mussel (Mollusca: Bivalvia) associated with chemosynthetic symbionts in the Marmara Sea. Deep-Sea Res. I 67:121-132
- Rodrigues, C.F., Cunha, M.R., Olu, K., Duperron, S. (2012) The smaller vesicomyid bivalves in the genus Isorropodon (Bivalvia, Vesicomyidae, Pliocardiinae) also harbour chemoautotrophic symbionts. Symbiosis 56(3):129-137
- Gaudron, S.M., Demoyencourt, E., Duperron, S. (2012) Reproductive traits of the cold seep symbiotic mussel Idas modiolaeformis, gametogenesis and larval biology. Biol. Bull. 222:6-16
- Lorion, S., Halary, S., do Nascimento, J., Samadi, S., Couloux, A., Duperron S. (2012) Evolutionary history of Idas sp. Med (Bivalvia, Mytilidae), a cold seep mussel bearing multiple symbionts. Cah. Biol. Mar. 53(1):77-87
– Duperron, S. Guezi, H., Gaudron, S.M., Pop Ristova, P., Wenzhöfer, F., and Boetius, A. (2011) Relative abundances of methane- and sulphur-oxidising symbionts in the gills of a cold seep mussel and link to their potential energy sources. Geobiology 9:481-491.
- Halary, S., Duperron, S., and Boudier, T. (2011) A direct image-based correlative microscopy technique for coupling identification and structural investigation of bacterial symbionts associated with metazoans. Appl. Environ. Microbiol. 77(12):4172-4179.
- Brissac, T., Rodrigues, C.F., Gros, O., and Duperron, S. (2011) Characterization of bacterial symbioses in Myrtea sp. (Bivalvia: Lucinidae) and Thyasira sp. (Bivalvia: Thyasiridae) from a cold seep in the eastern Mediterranean. Mar. Ecol. 32(2):198-210 (IF=1.56)
- Rodrigues, C.F. and Duperron, S. (2011) Distinct symbiont lineages in three thyasirid species (Bivalvia: Thyasiridae) from the eastern Atlantic and Mediterranean Sea. Naturwissenschaften. 98: 281-287.
- Rodrigues, C. F., Duperron, S., and Gaudron, S.M. (2011) First documented record of a living solemyid bivalve in a pockmark of the Nile Deep-sea fan (eastern Mediterranean Sea). Mar. Biodiv. Records. 4: e10.
- Jensen, S., Duperron, S., Birkeland, N-K., and Hovland, M. (2010) Intracellular Oceanospirillales bacteria inhabit gills of Acesta bivalves. FEMS Microbiol. Ecol. 74: 523-533.
- Zbinden, M., Pailleret, M., Ravaux, J., Gaudron, S.M., Hoyoux, C., Lambourdière, J., Warén, A., Lorion, J., Halary, S., and Duperron, S. (2010) Bacterial communities associated with the wood-feeding gastropod Pectinodonta sp. (Patellogastropoda, Mollusca). FEMS Microbiol. Ecol. 74: 450-463.
- Riou, V., Duperron, S., Halary, S., Dehairs, F., Bouillon, S., Martins, I., Colaço, A., and Serrão Santos, R. (2010) Variation in physiological indicators in Bathymodiolus azoricus (Bivalve: Mytilidae) at the Menez Gwen deep-sea hydrothermal vent site within a year. Mar. Environ. Res. 70(3-4): 264-271
- Rodrigues, C.F., Webster, G., Cunha, M.R., Duperron, S., and Weightman, A.J. (2010) Chemosynthetic bacteria found in bivalve species from mud volcanoes of the Gulf of Cadiz. FEMS Microbiol. Ecol. 73(3): 486-499
- Duperron, S. (2010) The diversity of deep-sea mussels and their bacterial symbioses (review). In Kiel (Ed.); The Vent and Seep Biota, Topics in Geobiology series, Springer, 33: 137-168 (peer-reviewed book chapter)
- Le Bris, N. and S. Duperron (2010) Chemosynthetic communities and biogeochemical energy pathways along the MAR: the case of Bathymodiolus azoricus. AGU Geophysical Monograph Series, 180: pp-pp (peer-reviewed book chapter)
- Gaudron, S.M., Pradillon, F., Pailleret, M., Duperron, S., Le Bris, N., and Gaill, F. (2010) Colonization of organic substrates deployed in deep-sea reducing habitats by symbiotic species and associated fauna. Mar. Environ. Res. 70: 1-12
- Durand, L., M. Zbinden, V. Cueff-Gauchard, S. Duperron, E. G. Roussel, B. Shillito, M. A. Cambon-Bonavita (2010) Microbial diversity associated with the hydrothermal shrimp Rimicaris exoculata gut and occurrence of a resident microbial community. FEMS Microbiol. Ecol. 71(2): 291-303
- Cambon-Bonavita, M. A., Nadalig, T., E. Roussel, E. Delage, S. Duperron, J.C. Caprais, A Boetius, M. Sibuet (2009) Diversity and distribution of methane oxidizing microbial communities associated with different faunal assemblages in a giant pockmark of the Gabon continental margin. Deep-sea Res. II 56: 2248-2258
- Duperron, S., D. de Beer, M. Zbinden, A. Boetius, V. Schipani, N. Kahil, F. Gaill (2009) Molecular characterization of bacteria associated with the trophosome and the tube of Lamellibrachia sp., a sibloglinid annelid from cold seeps in the eastern Mediterranean. FEMS Microbiol. Ecol. 69: 395-409
- Bayon, G., L. Loncke, S. Dupré, J.-C. Caprais, E. Ducassou, S. Duperron, J. Etoubleau, J.-P. Foucher, Y. Fouquet, S. Gontharet, G.M. Henderson, C. Huguen, I. Klaucke, J. Mascle, S. Migeon, H. Ondréas, C. Pierre, M. Sibuet, A. Stadnitskaia, J. Woodside (2009) Multi-disciplinary investigation of fluid seepage on an unstable margin: The case of the Central Nile deep sea fan. Mar. Geol. 261 : 92-104
- Zielinski, F. U., A. Pernthaler, S. Duperron, L. Raggi, O. Giere, C. Borowski, and N. Dubilier (2009) Widespread Occurrence of an Intranuclear Bacterial Parasite in Vent and Seep Bathymodiolin Mussels. Environ. Microbiol. 11(5): 1150-1167
- Duperron, S., J. Lorion, S. Samadi, O. Gros, F. Gaill (2009) Symbioses between deep-sea mussels (Mytilidae: Bathymodiolinae) and chemosynthetic bacteria: diversity, function and evolution. C. R. Biol. 332: 298-310
- Lorion, J., S. Duperron, O. Gros, C. Cruaud, A. Couloux, and S. Samadi (2009) Several deep-sea mussels and their associated symbionts are able to live both on wood and on whale falls. P. Roy. Soc. B- Biol. Sci. 276: 177-18
- Riou, V., S. Halary, S. Duperron, S. Bouillon, M. Elskens, R. Bettencourt, R. Santos, F. Dehairs, and A. Colaço (2008) Influence of CH4 and H2S availability on symbiont distribution, carbon assimilation and transfer in the dual symbiotic vent mussel Bathymodiolus azoricus. Biogeosciences 5: 1681-1691
- Duperron, S., M.C.Z. Laurent, F. Gaill, O. Gros (2008) Sulphur-oxidising extracellular bacteria in the gills of Mytilidae associated with wood falls. FEMS Microbiol. Ecol. 63(3): 338-349
- Halary, S., V. Riou, F. Gaill, T. Boudier, S. Duperron (2008) 3D FISH for the quantification of methane- and sulphur-oxidising endosymbionts in bacteriocytes of the hydrothermal vent mussel Bathymodiolus azoricus. ISME J. 2(3): 284-292
- Duperron, S., S. Halary, J. Lorion, M. Sibuet, F. Gaill (2008) Unexpected co-occurence of 6 bacterial symbionts in the gills of the cold seep mussel Idas sp. (Bivalvia: Mytilidae). Environ. Microbiol. 10(2): 433-445.
- Duperron, S., M. Sibuet, B.J. MacGregor, M.M.M. Kuypers, C.R. Fisher, N. Dubilier (2007). Diversity, relative abundance and metabolic potential of bacterial endosymbionts in three Bathymodiolus mussels species from cold seeps in the Gulf of Mexico. Environ. Microbiol. 9(6): 1423-1438.
- Duperron, S., A. Fiala-Médioni, J.C. Caprais, K. Olu-Le Roy, M. Sibuet (2007). Evidence for chemoautotrophic symbiosis in a Mediterranean cold seep clam (Bivalvia: Lucinidae): comparative sequence analysis of bacterial 16S rRNA, APS reductase and RubisCO genes. FEMS Microbiol. Ecol. 59(1): 64-70.
- Duperron, S., C. Bergin, F. Zielinski, Z. P. McKiness, E. DeChaine, C. M. Cavanaugh, N. Dubilier (2006). A dual symbiosis shared by two mussel species, Bathymodiolus azoricus and B. puteoserpentis (Bivalvia: Mytilidae), from hydrothermal vents along the northern Mid-Atlantic Ridge. Environ. Microbiol. 8(8): 1441-1447.
- Duperron, S., T. Nadalig, J.C. Caprais, M. Sibuet, A. Fiala-Médioni, R. Amann, N. Dubilier. (2005). Dual symbiosis in a Bathymodiolus mussel from a methane seep on the Gabon continental margin (South East Atlantic): 16S rRNA phylogeny and distribution of the symbionts in the gills. Appl. Environ. Microbiol. 71(4) :1694-1700.
- Lopez-Garcia, P., S. Duperron, P. Philippot, J. Foriel, J. Susini, D. Moreira. (2003). Bacterial diversity in hydrothermal sediment and epsilonproteobacterial dominance in experimental icrocolonizers at the Mid-Atlantic Ridge. Environ. Microbiol. 5(10):961-976.
- Tsitrone, A., S. Duperron and P. David. (2003). Delayed selfing as an optimal mating strategy in preferentially outcrossing species: theoretical analysis of the optimal age at first reproduction in relation to mate availability. Am. Nat. 162(3):318-331.
Other papers
– Duperron S, Marie B, Bernard C (2023) Dans les eaux de baignade, les cyanobactéries : amies ou ennemies ? The Conversation; 9 mai.
– Ravaux J, Duperron S (2022) Poissons des glaces et grenouilles des bois, comment résistent-ils au froid extrême ? The Conversation, 26 dec.
– Bernard C, Duperron S (2022) Le phytoplancton, un monde méconnu qui fait vivre la planète. Ouvrage Collectif « La Terre, le vivant, les humains Petites et grandes découvertes de l'histoire naturelle », ed. J-D Vigne, B. David ; ed. La Découverte .
- Duperron, S. (2019) Les symbioses chimiosynthétiques dans l’Océan profond, article destiné à la formation continue des enseignants de SVT disponible sur le module de formation « MICROBES », ministère de l’éducation nationale, MNHN.
- Duperron S., Gaill F. (2017) La clé du futur réside dans les abysses. Hors série La Vie – Le Monde « L’Atlas de l’eau et des Océans », novembre, 22 : 166-163
- Duperron, S. and Rodrigues, C.F. (2010) Symbioses between animals and chemosynthetic bacteria on European margins: summary of recent progress. Hermione Newsletter, winter issue (5):8-9.
- Duperron, S., S. Halary, I. Boutet, F. Lallier (2009) Zoom: La symbiose multiple chez les moules : un ménage à trois et plus si affinités. Biofutur 28 (299) : 49.
- Lallier, F. H., I. Boutet, S. Halary, S. Duperron (2009) La chimiosynthèse apprivoisée: des modèles venus de l’océan profond. Biofutur 28 (299) : 45-48.
Invited talks
– Duperron S. (2023) Efflorescences de cyanobactéries et bactéries du tube digestif des poissons : un exemple du lien entre écotoxicologie et micrbiote. Webinaire de la FIRE, 20 novembre https://www.canal-u.tv/chaines/fire/sebastien-duperron-efflorescences-de-cyanobacteries-et-bacteries-du-tube-digestif-des
– Duperron S. (2023) Quels liens entre écotoxicologie et microbiote ? Colloque LIA ROPSE, Monaco, 13 octobre.
– Duperron S. (2023) Quand l’écotoxicologie rencontre le microbiote : l'exemple de l'impact des efflorescences de cyanobactéries sur le microbiote digestif des poissons. Conférence plénière invitée à l’occasion de la journée mondiale du microbiote, Nantes, 29 juin
– Duperron S. (2023) Quand l’écotoxicologie rencontre le microbiote. Conférence plénière invitée à l’occasion des 10 ans du réseau Ecotoxicomics, Fondation Rovaltain, Valence, 6 juin.
– Duperron S. (2023) Les efflorescences de cyanobactéries altèrent la composition du microbiote digestif des poissons et le métabolome de l’holobionte: quand l'écotoxicologie rencontre le microbiote ; Ifremer Brest, 31 mars
– Duperron S. (2022) La collection de Cyanobactéries et Microalgues du Muséum national d’Histoire naturelle. INRAe Thonon les Bains, 18 octobre
– Duperron S. (2021) Le continuum hôte microbiote environnement : des milieux extrêmes à l’écotoxicologie. MNHN, séminaire de département AVIV, 2 juin, Paris
– Duperron S. (2020) Le microbiote, interface dynamique entre hôte et environnement, une frontière de l’écotoxicologie ? INRAE, Université de Montpellier 13 janvier.
– Duperron S. (2019) Proliférations de cyanobactéries et microbiote des poissons téléostéens d’eau douce. Microbes, 15ème congrès national de la Société Française de Microbiologie, 30 sept, 2 oct, Paris, France.
– Duperron S. (2019) Influence des pressions environnementales sur le microbiote. Journées de l’UMR SEBIO, Université de Reims, 3 juillet, Reims.
– Duperron, S. (2019) CABMAN – cyanobactéries benthiques de mangrove : diversité, interactions, substances bioactives. Journée de restitution du défi X-Life – MITI, CNRS, 12 février, Paris.
– Duperron, S. (2019) S’adapter à la vie en milieu extrême dans l’Océan profond par la symbiose: quand les animaux rencontrent la chimiosynthèse. Colloque « la bio-ingénierie des symbioses », AgroParisTech, 7 février
– Duperron, S. (2018) La composition du microbiote du poisson médaka est-elle modifiée lors de son exposition à des cyanotoxines ? Symposium Interactions Biotiques Marines, Banyuls-sur-Mer, 25 jui.
– Duperron, S. (2017) La symbiose : un mécanisme de couplage biosphère-géosphère dans les grands fonds marins. Journées nationales de l’Association des Professeurs de Biologie-Géologie « des formes de vie : la géodynamique revisitée », Paris, 17-19 novembre.
– Duperron, S. (2017) Symbioses bactéries-animaux dans l’océan profond. Colloque La Microbiologie dans Tous ses Etats, Sorbonne Universités, Paris, 23 mai.
– Duperron, S. (2017) Adaptation by association in the deep sea: the case of chemosynthetic symbioses in bivalves, IBPS Symposium Symbiosis in evolution, biology and human health, Paris, 15-17 mars.
– Duperron, S. (2014) La double symbiose comme facteur d’adaptation à un environnement variable chez Bathymodiolus azoricus. Journées Biodiversité et environnement profond, UPMC – CNRS – Fondation TOTAL, Paris, 27 juin.
- Duperron, S. (2013) Diversité des symbioses chimiosynthétiques chez les bivalves de l'Atlantique Nord et de Méditerranée. Cérémonie pour la remise de la Médaille de la Société d'Océanographie de France, Musée Océanographique, Monaco, 7 nov.
- Duperron, S. (2012) Diversité et evolution des symbioses entre métazoaires et bactéries dans les écosystèmes marins profonds à base chimiosynthétique. Université Paul Sabatier, Toulouse, 30 nov.
- Duperron, S., Rodrigues, C.F., Cunha, M.R., Olu, K., Gaudron, S.M. (2012) Symbioses between bivalves and chemosynthetic bacteria on European and African margins: summary of recent progress. 11th Gas In Marine Sediment (GIMS) conference, Nice, France, Sept. 4-7.
- Duperron, S. (2011) Flexibility and connectivity of mussel symbioses: how to cope with variable and fragmented habitats? Chemosymbiotic molluscs and their environments: from intertidal to hydrothermal vents - Malacological Society of London, London, UK, Apr. 7-8.
- Duperron, S. (2009) Les enjeux de la connaissance et de la protection de la biodiversité : l’exemple de quelques écosystèmes marins particuliers. Colloque CNRS-ISCC – INEE « Communiquer la biodiversité », Paris, France, 15 juin.
- Duperron, S. (2008) Bathymodiolus and Olavius: Multiple symbioses and their plasticity. Ecole thématique CNRS “Trophic endosymbioses and their role in past and present Eukaryote evolution”, Roscoff, France, Oct. 20-23
- Duperron, S. J. Lorion, S. Samadi, O. Gros, F. Gaill (2008) Symbioses between deep-sea bathymodioline mussels and chemosynthetic bacteria: diversity, function and evolution. International Congress of Zoology, Aug. 26-29, Paris (France)
- Duperron, S. (2006) Bacterial symbiosis in two cold seep-associated bivalves from the Eastern Mediterranean. EUROMARGINS Conference, Bologna (Italy), 4-7 October 2006
- Duperron, S., (2006) Biogeographical significance of multiple symbiont distribution in bathymodiolin mussels from cold seeps and hydrothermal vents. 5th Congress of the International Symbiosis Society, Vienna (Austria), Aug. 4-10
- Duperron, S., M. Sibuet, N. Dubilier, F. Gaill (2006). Symbiosis in mytilids from chemosynthetic ecosystems: relationship between symbiont diversity and environmental conditions. General Assembly, EGU, Vienna (Austria), Aug. 4-10
- Duperron, S., M. Sibuet, N. Dubilier (2006). Biogeographical significance of multiple symbiont distribution in Bathymodiolus species (Bivalvia: Mytilidae) along the Atlantic Equatorial belt. ChEss meeting, 8-10 March 2006.
Other talks
– Duperron S. L’écologie microbienne est-elle une science expérimentale (2023) XXIème colloque de l’Association Francophone d’Ecologie Microbienne (AFEM), Carqueiranne, 18-20 oct
– Duperron S. The PMC collection of Cyanobacteriaand microalgaein the Paris Museum of national History (2023) 41st Annual General Meeting of the European Culture Collections’ Organisation (ECCO) Bruxelles, Belgique, 19-22 sept.
– Duperron S., Gallet A, Halary S, Foucault P, Duval C, Huet H, Marie B (2022) Effect of simulated cyanobacterial blooms on the gut microbiota and metabolome of the medaka fish : a case study of microbiome-aware ecotoxicology. Ecotoxicomic 2022, Montpellier, France, 15-18 nov.
- Duperron S., Halary S, Gallet A, Foucault P, Duval C, Huet H, Marie B (2022) Disruption of fish gut microbiota composition and holobiont’s metabolome during cyanobacterial blooms: a case study of microbiome-aware ecotoxicology. International Ssymbiosis Society / Holobiont10 congress, Lyon, Jul. 25-29.
– Duperron S., Halary S, Gallet A, Foucault P, Duval C, Huet H, Marie B (2022) Les efflorescences de cyanobactéries altèrent la composition du microbiote digestif des poissons et le métabolome de l’holobionte. GIS Cyanobactéries, Lyon, may 18-19.
– Duperron S., Gallet A, Halary S, Duval C, Huet H, Foucault P, Marie B (2021) Soupe de poissons aux algues : comment les efflorescences altèrent la composition du microbiote digestif des poissons et le métabolome de l’holobionte. 10ème colloque de l’Association Francophone d’Ecologie Microbienne, nov 15-19.
– Duperron S. (2021) The dynamics of gill tissue in symbiont-bearing Bathymodiolus mussels: first visual insights into apoptosis, cell proliferation and differentiation patterns. 16th Deep-Sea Biology Symposium, Brest, France, sep 13-17th.
– Duperron S, Halary S, Habiballah M, Gallet A, Huet H, Bernard C, Marie B (2019) Effects of microcystin and extracts from toxin-producing cyanobacterial strains on the gut microbiota of medaka fishes (Oryzias latipes) : a microcosm approach. SETAC Europe 29th Annual Meeting, 26-29 may, Helsinki, Finland.
– Piquet B, Shillito B, Szafranski KM, Lallier FH, Duperron S, Andersen AC (2019) Cellular turnover in the symbiont-housing gills of deep-sea mussels: which mechanisms to regulate their microbiota? 9th annual meeting of the EFOR Network, may 7th, Paris, France.
– Duperron S, Bernard C (2019) Cyanobactéries: diversité, rôle et interactions à Mayotte (lac Dziani, mangroves). Journée MNHN des outre-mers, 21 fév, Paris, France
– Duperron S, Habiballah M, Gallet A, Huet H, Duval C, Bernard C, Marie B (2018) Influence des cyanotoxines sur la composition des communautés bactériennes associées au poisson médaka. GDR Ecotoxicologie Aquatique, 4-5 déc, Antony, France.
– Duperron S, Gros O, Piquet B, Szafranski K, Laming S, Shillito S (2017) The flexible symbioses of deep-sea mussels: a not-so-straight story, 6th international symposium on Chemosynthesis-Based Ecosystems (CBE6), 27th aug 1 sept, Woods Hole, USA.
– Duperron S, Piquet B, Lallier, FH, Andersen AC, Shillito B (2017) Deep-sea mussels and their symbionts: recent findings and open questions, International Conference on Holobionts, apr. 19-21, Paris, France.
– Duperron S, Piquet B, Andersen AC, Shillito B (2017) Flexibilité des symbioses chimiotrophes chez les bivalves mytilidés de l’Océan profond : résultats récents, questions ouvertes. Symposium Réseau Ecologie des Interactions Durables, REID, 22-24 mars, Toulouse, France.
– Duperron, S., Szafranski KM, Quiles A, Piquet B, Cambon-Bonavita MA, Zbinden M, Shillito S (2016) Why we must care about the flexible symbioses of deep-sea animals when addressing the impact of mining. EU FP 7 Midas final meeting, 3-7 oct, Ghent, Belgium
– Duperron S. Laming SR, Szafraski KM, Piquet B, Quiles A, Shillito B, Lallier F (2016) La flexibilité des symbioses chez les mytilidés de l’Océan profond; résultat récents, questions ouvertes. Colloque CONNECT2, 9-11 mai, Brest, France
– Duperron S. (2015) The variability of bacterial symbiont communities in deep-sea mussels: a multi-scale approach. 14th Deep Sea Biology Symposium, 1-5 septembre, Aveiro, Portugal
– Duperron, S. (2015) Revisiting the flexible symbioses of deep-sea mussels using NGS, FISH and live experiments. International Symbiosis Society Meeting, 13-17 juillet, Lisbonne, Portugal
– Duperron, S. (2015) La flexibilité des symbioses chez les moules, une clé de leur adaptation aux environnements à base chimiosynthétique. Meeting CONNECT, 11-13 mai, Le Mans, France
- Duperron, S. (2010) An overview of deep-sea mussel symbioses: facts, hypotheses and future directions. XIIth Deep Sea Biology Symposium, Reykjavik, Iceland, 7-11 june.
- Duperron, S., Rodrigues, C. F., Brissac, T., Gros, O. (2010) Chemosynthetic symbioses in metazoans: from the eastern Mediterranean to the Gulf of cadiz and Regab. HERMIONE Meeting, Malta, Apr. 12-16
- Duperron, S., Rodrigues, C. F., Brissac, T. Gros, O. Halary, S. (2010) Chemosynthetic symbioses in bivalves: from the eastern Mediterranean to the Gulf of cadiz and Regab. HERMIONE Worhshop on Brine Ecosystems, Mar. 1-2, Paris, France.
- Duperron, S., A. Boetius, D. De Beer, F. Gaill, O. Gros, S. Halary, J. Lorion, K. Olu, M. Sibuet, M. Zbinden (2009) Chemosynthetic symbioses in Metazoans from eastern Mediterranean cold seeps. HERMES Meeting, Faro (Portugal), Mar. 2-6.
- Duperron, S., T. Nadalig, J. C. Caprais, C. R. Fisher, S. Wetzel, N. Dubilier, M. Sibuet (2005). Symbiose bactérienne chez les Bathymodiolus (Bivalvia : Mytilidae) des sites de fluides froids en contexte océanique profond : diversité des associations, influence de l’environnement. 2ème Colloque d’Ecologie Microbienne, CEM, Obernai (France), 9-12 mai.
- Duperron, S., J. C. Caprais, B. MacGregor, N. Dubilier, M. Sibuet (2005). Combining approaches to understand the ecology of symbiotic invertebrates from chemosynthetic ecosystems. General Assembly, EGU, Vienna (Austria), Apr. 24-29. Geophysical Research Abstracts, Vol. 7, 06301, 2005.
- Duperron, S., T. Nadalig, M. Sibuet, J.C. Caprais, A. Fiala-Médioni, N. Dubilier. (2004). Dual symbiosis in Bathymodiolus sp. (Bivalvia : Mytilidae) from a new cold seep area on east atlantic margin : 16S rRNA phylogeny and distribution of the symbionts in the gills. 10th International Symposium on Microbial Ecology, Cancun (Mexico), August 22-27.