Abstracts
1
Agustin Ormazabal, Juliana Isabel Palma and Gustavo Pierdominici-Sottile
Study on the conformational diversity of the RsmE - RsmZ sRNA/protein complex by performing Molecular Dynamics Simulations
2
Marcelo Caparotta, Diego Bustos and Diego Masone
Intrinsic disorder in α-synuclein: Effects on bending lipid bilayers
3
Diego Zavallo, Juan Manuel Crescente, Magdalena Gantuz, Leone Melisa, Leonardo Vanzetti, Ricardo Masuelli and Sebastian Asurmendi
Genomic re-assessment of the transposable element landscape of the potato genome
4
Estefania Mancini, Malgorzata Rogalska and Juan Valcárcel Juárez
Reconstruction of splicing regulatory network
5
Marina Uhart, Luis G Moyano, Diego Masone and Diego M Bustos
Intrinsic structural disorder on proteins is involved in the interactome evolution
6
Dario Elias, Lucas Gimenez, Hugo Krupitzki, Fernando Poletta, Mariana Piola and Jorge Lopez Camelo
Topic modelling of preterm birth
7
Dario Elias, Hebe Campaña, Mónica Rittler, Viviana Cosentino, Fernando Poletta, Rita Santos, Mariela Pawluk, Lucas Gimenez, Julia Ratowiecki, Juan Gili and Jorge Lopez Camelo
Congenital anomaly associations: a graph theory approach
8
Matyas Pajkos and Zsuzsanna Dosztanyi
A novel motif centric protein alignment method
9
Dario Rocha, Aldana González Montoro, Laura B Prato and Elmer Fernandez
Breast cancer molecular subtypes with uncertainty assessment in a pan-cancer context
10
Salvador Nicosia, Sebastian Moschen, Paula Fernandez and Francisco Astigueta
Genómica funcional del proceso de senescencia foliar: Análisis bioinformatico del fenotipado masivo de líneas transgénicas que sobreexpresan genes de girasol promotores de la senescencia foliar
12
Nicolás Palopoli, Julia Marchetti, Cristian Emanuel Guisande Donadio, Alexander Monzon, Maria Silvina Fornasari, Silvio Tosatto and Gustavo Parisi
Ensemble-derived structural constraints shape evolutionary rate heterogeneity in disordered regions of proteins
13
Iván Gabriel Peros, Carolina Susana Cerrudo, Marcela Pilloff, Mariano Nicolás Belaich, Mario Lozano and Pablo Daniel Ghiringhelli
Comprehensive bioinformatic analysis of the 3 ’end of baculoviral genes
14
Jonathan Raad, Georgina Stegmayer and Diego Milone
Improving pre-miRNA prediction with complexity measures of the mature and deep learning
15
Bálint Mészáros, András Zeke, Borbála Hajdu-Soltész and Zsuzsanna Dosztanyi
Intrinsic protein disorder requires new targeting strategies in cancer
16
Sergio Gonzalez, Maximo Rivarola, Sergio Lew and Norma Paniego
Assessing bioinformatics strategies for de-novo transcriptome assembly
17
Ana Julia Velez Rueda, Leandro Matías Sommese, Sebastián M. Ardanaz, Guillermo Ignacio Benítez, Luis E Iglesias and Gustavo Parisi
To be or not to be: the promiscuity dilemma in serum albumins
18
Maximiliano Estravis Barcala, Tomás Moyano, Carolina Soliani, María Verónica Arana, Rodrigo A. Gutiérrez and Nicolás Bellora
Nothofagus pumilio (Lenga) genome sequencing as a resource for interdisciplinary and systemic studies in a context of Global Climate Change
19
Matias Miranda, Dario Rocha, M. Romina Girotti, Yamil D. Mahmoud, A. Fernandez Elmer, M. Alejandra Bosio, Gustavo Chiodi and Laura Prato
MIXTUREpy: A machine learning based method for immuno content characterization of tumor samples in python
20
Guillermo Ignacio Benítez, Ana Julia Velez Rueda, Juliana Glavina, Patricio Chinestrad, Felipe Tau, Martín Salas, Silvina Fornasari, Gustavo Parisi, Nicolás Palopoli and Leandro Matías Sommese
Bioinformatics goes to School: From the lab to the classroom, hand in hand with the teachers.
21
Patricio Chinestrad, Pablo Lorenzano Menna, Nazareno González, Georgina A. Cardama, Javier Robles-Valero, Sonia Rodríguez-Fdez, Luis Francisco Lorenzo-Martín, Xosé R. Bustelo and Daniel E. Gomez
Computational prediction of the conformational diversity impact on Rac1 and it’s novel inhibitor 1A-116 interaction
22
Sergio Sebastian Samoluk, David John Bertioli, Jose Guillermo Seijo and Brian Abernathy
Assembly of chloroplast genomes provides insights into the origin of cultivated peanut
23
Nahuel Escobedo, Alexander Monzon, Nicolas Palopoli and Gustavo Parisi
Characterization of conformational changes in homo-oligomeric proteins
24
Ariel Aptekmann
Metal-binding Predictor
25
Carolina L Gandini, Laura E Garcia, Cinthia C Abbona, Sergei Kushnir, Danny Geelen and Maria V Sanchez-Puerta
Inferring Recombination Events in Plant Mitochondria Using High-Throughput Sequencing Data
26
Juliana Glavina, Nicolás Sebastián González Foutel, Gregorio Fernández-Ballester, Wade Borcherds, Gary Daughdrill, Ignacio Enrique Sánchez and Lucía Beatriz Chemes
Conservation of high affinity binding between the viral adenovirus E1A and host Retinoblastoma proteins requires a flexible and disordered linker.
27
Juliana Glavina, Lucía Álvarez, Gregorio Fernández-Ballester, Peter Sehr, Joe Lewis, Toby James Gibson, Ignacio Enrique Sánchez and Lucía Beatriz Chemes
Comparative analysis of structure and sequence based methods for the prediction of linear motif binding energies.
28
Lucas Maldonado, Juan Arrabal, Gabriel Lichtenstein, Guilherme Oliveira and Laura Kamenetzky
Phylogenetic history of helminths through whole genome variants analysis: the case of the new Echinococcus oligarthrus genome
29
Gábor Erdős and Zsuzsanna Dosztányi
A novel structure centric method for binding partner discovery of linear motif binding proteins
30
Elizabeth Martínez Pérez and Cristina Marino Buslje
Models to predict Total Mutational Burden in Cancer
31
Matias Sebastian Carletti, Jorge Luis Porfido, Massimo Bellanda, Guillermo Benítez, Gustavo Salinas, Maria Silvina Fornasari and Gustavo Parisi
Analysis of the structure and function relationships and evolutionary origin of an atypical thioredoxin (IsTRP)
32
Salvador Nicosia, Sebastian Moschen and Paula Fernandez
Functional genomics of leaf senescence process: Bioinformatics analysis of massive phenotyping Arabidopsis thaliana transgenic lines overexpressing NAC transcription factors
33
Machine learning methods for optimization of a control gut microbiome database in the Argentine population
34
Laura Chalup, Sergio Sebastián Samoluk, Federico Agostini, Germán Ariel Robledo Robladez and Guillermo Seijo
Comparative analysis of structure and variability of the ribosomal genes of the Peanut and their wild diploids parentals for evolutionary studies
35
Georgina Stegmayer, Leandro Bugnon, Cristian Yones, Jonathan Raad, Matias Gerard, Mariano Rubiolo, Gabriela Merino, Milton Pividori, Leandro DiPersia and Diego Milone
Deep learning for reading and interpreting biomedical papers
36
Georgina Stegmayer, Leandro Di Persia and Diego Milone
Annotation pipeline for inferring gene functions integrating GO annotations and expression data
37
Eliana G. Vallmitjana, Gabriela A. Merino and Victor H. Casco
Machine learning and bioinformatic analysis of transcriptomic data to identify colorectal cancer subtypes
38
Mauricio J. Lozano, José L. López, María Laura Fabre and Antonio Lagares
CUBES and CUBACR, script packages for the analysis of evolutionary traits of codon bias.
39
Bruno Alvarez and Morten Nielsen
NNAlign_MA; MHC peptidome deconvolution for accurate MHC binding motif characterization and improved T cell epitope predictions
40
Ines Hugalde, Marcos Paolinelli, Cecilia Agüero, Summaira Riaz, Hernán Vila and Andy Walker
Molecular determinants of vegetative vigour in a Ramsey x Riparia GM population revealed by Gene Ontology analysis.
41
Heli Magalí García Álvarez, Mareike Wendorff, Hesham El Abd, Thomas Østerbye, Søren Buus, Andre Franke and Morten Nielsen
New predictors for peptide-MHC class II binding affinity trained on novel data from a peptide chip platform.
42
Maria I Freiberger, A. Brenda Guzovsky, Diego Ferreiro and Rodrigo Gonzalo Parra
On the role of local frustration on proteins’ catalytic sites
43
Cristian Yones, Leandro Bugnon, Jonathan Raad, Diego Milone and Georgina Stegmayer
MicroRNA prediction from genome-wide data with deep learning: a novel approach based on convolutional residual networks
44
Manuel Llanos, Felipe Gonzalez Casabianca, Layla Hirsh, Karla Pedraza, Robert Finn and Andrey V. Kajava
A protocol to construct structure-based Profile/Hidden Markov Models for tandem repeat identification and classification
45
Romina Armando, Diego Mengual Gomez, Ezequiel Juritz, Pablo Lorenzano Menna and Daniel Gomez
Novel strategy to inhibit telomerase for cancer treatment: Homology Modeling and Docking-Based Virtual Screening for Ligands of Human Dyskerin.
46
Patricio Chinestrad, Julian Maggio, Pablo Lorenzano Menna, Daniel Gomez and Diego Mengual Gomez
Rational design of PIN1 pharmacological inhibitors based on conformational analysis of a nonstructural point mutation
47
Bruno Kaufman, Maximiliano Sebastián Beckel, Andrés Rabinovich and Ariel Chernomoretz
Detecting pairwise correlations in 5' donors' RNA sequences
48
Estefanía Mancini, Andres Rabinovich, Javier Iserte, Marcelo Yanovsky and Ariel Chernomoretz
ASpli v2: detection and quantification of complex splicing patterns
49
Laura I. Giaccardi, Julieta M. Manrique, Misael A. Badenas, Andrea Y. Calvo and Leandro R. Jones
Taxa-area relationship among ubiquitous and profuse bacterial taxa (LUP) of the Argentine Sea
50
Lucio Aliperti Car, Ignacio Enrique Sánchez and Pablo Turjanski
Looking for archetypes for codon usage across genomes
51
Verónica Bornancini, Matías Irazoqui, Ariel Amadio and Paola Lopez Lambertini
Intra-host genetic diversity analysis of full-length begomovirus infecting pepper in Argentina
52
Jorge Emilio Kolomenski, Marisol Delea, Leandro Simonetti, Mónica Carolina Fabbro, Carlos David Bruque, Liliana Dain and Alejandro Daniel Nadra
Update of genetic variants in the NKX2.5 gene
53
Flavio E. Spetale, Javier Murillo, Pilar Bulacio and Elizabeth Tapia
Cross-Ontology Prediction of lncRNAs on Zebrafish
54
Fernando Villarreal, Agustin Amalfitano, Marcelo Atencio, Nicolás Stocchi and Arjen ten Have
Comprehensive characterization of the complex BAHD acyltransferase family from 25 plant species: phylogenetic analysis and identification of specificity determinant positions
55
Martin Eduardo Guerrero-Gimenez, Benjamin Lang, Juan Manuel Fernandez Muñoz, Daniel Ramon Ciocca, Stuart K. Calderwood and Felipe Carlos Martin Zoppino
A system biology approach finds miRNA-570 as a possible candidate for the disruption of the chaperome network in high-risk HER2 breast cancer tumors
56
Agustina Dinamarca, Diego M. Bustos and Luis G. Moyano
Learning complex protein interaction network representations
57
Agustín Amalfitano, Hugo Marcelo Atencio, Nicolas Stocchi, Arjen ten Have and Fernando Villarreal
SEQrutinator: Fast and objective sequence scrutiny for the analysis of highly complex protein superfamilies
58
Hugo Marcelo Atencio, Nicolás Stocchi, Agustín Amalfitano, Fernando Villarreal and Arjen ten Have
Phylogenetic relationships and characterization of UDP-glycosyltransferases (UGTs) in dicotyledonous plants
59
Nicolas Stocchi, Fernando Villarreal, Agustin Amalfitano, Marcelo Atencio and Arjen ten Have
Phylogenetic and Functional Classification of the Plant Cytochrome P450 superfamily by using SEQrutinator and HMMERCTTER inception
60
Romina Martinelli and Luis Esteban
IN SILICO ANALYSIS OF 1-α-HYDROXYLASE IN PROSTATE CANCER
61
Juan Manuel Fernandez Muñoz, Martin Eduardo Guerrero-Gimenez, Daniel Ramon Ciocca and Felipe Carlos Martin Zoppino
COPY NUMBER VARIATION OF THE HEAT SHOCK PROTEINS IN BREAST CANCER SUBTYPES AND THEIR RELATION WITH GENE EXPRESSION LEVELS.
62
Javier Murillo, Flavio Spetale, Ignacio Labari, Elizabeth Tapia and Pilar Bulacio
On the consistency of tools that predict the impact of SNPs in the BRCA1 gene
63
Maria Freiberger, Maximiliano Beckel, Ezequiel A. Galpern, Ariel Chernomoretz and Diego Ferreiro
Genomic structure of ankyrin repeat arrays
64
César Leonetti, Juliana Glavina, Lucia Chemes and Ignacio Sánchez
Relationship between the evolution of sequence, structure and function in the intrinsically disordered Mastadenovirus E1A oncoprotein
65
Diego M. Luna, Rodrigo Gonzalo Parra and Maria I. Freiberger
Patterns of frustration throughout the evolution in protein superfamilies.
66
German P. Barletta and Sebastian Fernandez Alberti
Apis Mellifera Odorant Binding Protein pH dependent ligand binding. A Constant pH Replica Exchange MD study.
67
Micaela Parra, Diego Libkind and Nicolás Bellora
Gene mining and characterization of intrinsically disordered regions of circadian clock components in Fungi
68
Fanny Rusman, Nicolás Tomasini, Noelia Floridia Yapur and Patricio Diosque
Deep description of mitochondrial guide RNA repertoires in the six main lineages of Trypanosoma cruzi