Stefano Schivo

Assistant Professor

stefano.schivo at ou dot nl

Mail address:
Postbus 2960
6401 DL
The Netherlands

Selected publications

Full list of publications available at

Khurana, S., Schivo, S., Plass, J. R. M., Mersinis, N., Scholma, J., Kerkhofs, J., Zhong, L., van de Pol, J., Langerak, R., Geris, L., Karperien, M., & Post, J. N. (2021). An ECHO of Cartilage: In Silico Prediction of Combinatorial Treatments to Switch Between Transient and Permanent Cartilage Phenotypes With Ex Vivo Validation. Frontiers in bioengineering and biotechnology, 9, [732917]. HTTPS://DOI.ORG/10.3389/FBIOE.2021.732917

Schivo, S., Khurana, S., Govindaraj, K., Scholma, J., Kerkhofs, J., Zhong, L., Huang, X., van de Pol, J., Langerak, R., van Wijnen, A. J., Geris, L., Karperien, M., & Post, J. N. (2020). ECHO, the executable CHOndrocyte: A computational model to study articular chondrocytes in health and disease. Cellular Signalling, 68, [109471]. HTTPS://DOI.ORG/10.1016/J.CELLSIG.2019.109471

Khurana, S., Bokkers, A., Geijs, D. J., Schivo, S., Karperien, M., & Post, J. N. (2019). In Silico Validation of a cartilage specific circadian clock: mutation of BMAL1 increased MMP expression. Osteoarthritis and Cartilage, 27(S1), S193-S194. HTTPS://DOI.ORG/10.1016/J.JOCA.2019.02.297

Degeling, K., Schivo, S., Mehra, N., Koffijberg, H., Langerak, R., de Bono, J. S., & IJzerman, M. J. (2017). Comparison of Timed Automata with Discrete Event Simulation for Modeling of Biomarker-Based Treatment Decisions: An Illustration for Metastatic Castration-Resistant Prostate Cancer. Value in Health, 20(10), 1411-1419. HTTPS://DOI.ORG/10.1016/J.JVAL.2017.05.024

Zhong, L., Schivo, S., Huang, X., Leijten, J., Karperien, M., & Post, J. N. (2017). Nitric Oxide Mediates Crosstalk between Interleukin 1β and WNT Signaling in Primary Human Chondrocytes by Reducing DKK1 and FRZB Expression. International Journal of Molecular Sciences, 18(11), [2491]. HTTPS://DOI.ORG/10.3390/IJMS18112491

Schivo, S., Scholma, J., van der Vet, P. E., Karperien, M., Post, J. N., van de Pol, J., & Langerak, R. (2016). Modelling with ANIMO: between fuzzy logic and differential equations. BMC Systems Biology, 10, [56]. HTTPS://DOI.ORG/10.1186/S12918-016-0286-Z

Khurana, S., Huisman, J., Schivo, S., & Post, J. N. (2020). Quantitative Molecular Models for Biological Processes: Modeling of Signal Transduction Networks with ANIMO. In A. J. van Wijnen, & M. S. Ganshina (Eds.), Osteoporosis and Osteoarthritis (2 ed., pp. 141-161). Humana Press. Methods in molecular biology Vol. 2221 HTTPS://DOI.ORG/10.1007/978-1-0716-0989-7_10

Kumar, R., Schivo, S., Ruijters, E. J. J., Yildiz, B. M., Huistra, D. J., Brandt, J., Rensink, A., & Stoelinga, M. I. A. (2018). Effective Analysis of Attack Trees: A Model-Driven Approach. In A. Russo, & A. Schürr (Eds.), Fundamental Approaches to Software Engineering: FASE 2018 (pp. 56-73). Springer. Lecture Notes in Computer Science Vol. 10802 HTTPS://DOI.ORG/10.1007/978-3-319-89363-1_4

Schivo, S., Leijten, J., Karperien, M., & Post, J. N. (2017). Computational Modeling of Complex Protein Activity Networks. In C. Prignet (Ed.), Protein Phosphorylation (pp. 155-178). IntechOpen. HTTPS://DOI.ORG/10.5772/INTECHOPEN.69804

Schivo, S., Yildiz, B. M., Ruijters, E. J. J., Gerking, C., Kumar, R., Dziwok, S., Rensink, A., & Stoelinga, M. I. A. (2017). How to Efficiently Build a Front-End Tool for UPPAAL: A Model-Driven Approach. In K. Guldstrand Larsen, O. Sokolsky, & J. Wang (Eds.), Dependable Software Engineering. Theories, Tools, and Applications: Third International Symposium, SETTA 2017, Changsha, China, October 23-25, 2017, Proceedings (pp. 319-336). Springer. Lecture Notes in Computer Science Vol. 10606 HTTPS://DOI.ORG/10.1007/978-3-319-69483-2_19

Schivo, S., & Langerak, R. (2017). Discretization of Continuous Dynamical Systems Using UPPAAL. In J-P. Katoen, R. Langerak, & A. Rensink (Eds.), ModelEd, TestEd, TrustEd (pp. 297-315). Springer. Lecture Notes in Computer Science HTTPS://DOI.ORG/10.1007/978-3-319-68270-9_15

Schivo, S., Scholma, J., Wanders, B., Post, J. N., Karperien, H. B. J., van der Vet, P. E., Langerak, R., & van de Pol, J. (2011). Modeling biological pathway dynamics with timed automata. --. Poster session presented at EMBO|EMBL Symposium on Structure and Dynamics of Protein Networks 2011, Heidelberg, Germany.