PHASE 4. Integration of metaomics data: data dissemination (online consortium meeting- 24.08.2021)
(manuscris inwork)
Framework for natural bone degradation more understood. First in-depth meta-omics study of marine bone degradation. The bioinformatic pipeline (with HMM profiling) is published, and applicable to other research areas (pollutants and plastic degradation).
We now know that bone degradation is a community effort. We also described an unique collagen cluster. In the past, focus was on isolated strains and single enzymes, now it is changing more towards communities and cocktails. Can translate the consortia idea into plastic and emerging pollutant bioremediation.
Vigtorniella, Neorickettsia-like (known as parasite, but not often found in marine) bacteria intracellular, not yet clear what symbiotic state they are in.
Contribute to speed up lab-to-market by development of new versatile crispr-cas tools to that makes it easier to integrate genes encoding (industrial) enzyme to chromosomal location in the production host Bacillus. Optimize our E. coli strain used for screening gene expression to handle colder conditions in order to slow down expression and improve solubility. Collagen-degradation gene cluster.
Ongoing development of a proline-sensitive functional assay for collagen-degrading strains based on the presence of increased level of proline after collagen hydrolysis.