topics:biology

Null Space - Interactive map of Alzheimer's genesAnalyzing gene interactions is a major pain and is super messy. I found that out trying to make a coherent representation of my findings after applying comparative discontinuities in TDA framework to gene co-expression data in Alzheimer's patients. While researching different ways to visualize

Null Space - if tree falls in the woodsA contemplation on concepts of causality, chains, cycles, observers, objectivity/subjectivity and their embedding into "living systems as manifolds" framework. "If a tree falls in the woods does it make a sound?" is a canonical question of a causality and observer problem. it can be rephrased as:

Null Space - The moment life came to beIf life is a small, richly–structured “world” carved out of an almost-random big world, geometry is the natural language. Every requirement we list becomes a shape or flow in state-space. Below is one way to sketch a “minimal metaphysical recipe” for life if we take seriously your two guiding

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