I am Mohimenul Karim. I completed my graduation in Computer Science and Engineering from Bangladesh University of Engineering and Technology (BUET). Currently I am pursuing PhD in Computer Science at Virginia Tech (VT) under the supervision of Dr. Yao. My research focus is on machine learning for digital health. I have had experience of working on protein structure refinement and quality estimation problems using deep learning. I am also working as a Graduate Teaching Assistant at VT.
During leisure, I like to read books and watch football.
Research Interests
Digital Health
Bioinformatics and Computational Biology
Applied Machine Learning
Large Language Model
Publications
Efficacy and accuracy responses of DNA mini-barcodes in species identification under a supervised machine learning approach
Link DOI: 10.1109/CIBCB49929.2021.9562838
PIQLE: protein–protein interface quality estimation by deep graph learning of multimeric interaction geometries
Link DOI: 10.1093/bioadv/vbad070
iQDeep: an integrated web server for protein scoring using multiscale deep learning models
Link DOI: 10.1016/j.jmb.2023.168057
Semi-supervised code translation overcoming the scarcity of parallel code data
Link DOI: 10.1145/3691620.3695524
Academic Background
PhD Student in Computer Science
Virginia Tech (Fall 2021-Current)
MS in Computer Science and Applications, 2025
Virginia Tech
B.Sc. in Computer Science and Engineering, 2017
Bangladesh University of Engineering and Technology (BUET)
Experience
Teaching Experience
Graduate Teaching Assistant in the Dept. of CS at Virginia Tech
Lecturer in the Dept. of CSE at Eastern University, Bangladesh
Lecturer in the Dept. of CSE at Bangladesh Army International University of Science and Technology
Industrial Experience
Technology Consultant at PwC (PricewaterhouseCoopers) Bangladesh
Training
Training of Trainers of Information Technology Engineers Examination (ITEE)
Honors & Awards
Dean's List Award (BUET, Level 2)
First Runner-up in Divisional Math Olympiad Bangladesh (Junior level)
Second Runner-up in Divisional Math Olympiad Bangladesh (Secondary level)
Other Skills & Interests
Chess
Football
Tennis
Reading books
Playing flute
Coaching department's football team at BAIUST