Uniplot R2012 Download

For reproducibility of older analysis results, previous versions of this trackare available for browsing in the form of the UCSC UniProt Archive Track Hub. The underlying data of all releases of this track (past and current) can be obtained from our downloads server, including the UniProtprotein-to-genome alignment. The file formats available are in thecommand line programs liftOver or pslMap, which can be used to mapcoordinates on protein sequences to genome coordinates. The filenames areunipToGenome.over.chain.gz (liftOver) and unipToGenomeLift.psl.gz (pslMap).

Download

The raw data of the current track can be explored interactively with theTable Browser, or theData Integrator.For automated analysis, the genome annotation is stored in a bigBed file that can be downloaded from thedownload server.The exact filenames can be found in the track configuration file. Annotations can be converted to ASCII text by our tool bigBedToBedwhich can be compiled from the source code or downloaded as a precompiledbinary for your system. Instructions for downloading source code and binaries can be foundhere.The tool can also be used to obtain only features within a given range, for example:bigBedToBed -chrom=chr6 -start=0 -end=1000000 stdout

CreditsThis track was created by Maximilian Haeussler at UCSC, with a lot of input from ChrisLee, Mark Diekhans and Brian Raney, feedback from the UniProt staff, AlejoMujica, Regeneron Pharmaceuticals and Pia Riestra, GeneDx. Thanks to UniProt for making all dataavailable for download.

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