7X01 - The Sixth Extinction
While Scully travels to Africa to piece together the meaning of the symbols on the spaceship beached on the Ivory Coast, Mulder is imprisoned by his own frenetic brain activity. He manages to get a message to Skinner who finds Kritschgau and together they try to understand what is happening to Mulder before it is too late.
7X02 - The Sixth Extinction II: Amor Fati
Scully frantically searches for a way to help her ailing partner without having anyone to turn to for help, while catatonic Mulder's dreams lead him away from his mission and the X-Files, to a place where he believes a better life awaits.
A monster that feeds on human brain matter tries to lead a normal life, but soon cannot control his feelings of hunger.
As the millennium draws to a close, former FBI agent Frank Black joins Mulder and Scully in a race to stop the apocalypse.
A young man, who has gained the ability to move faster than the eye can see, begins to use his new power to kill his enemies, including the local sheriff, who happens to be his father.
7X06 - The Goldberg Variation
Mulder and Scully get caught in a real-life Rube Goldberg device when they meet Henry Weems, who just may be the luckiest man on Earth. However, everyone around him don't seem to be that lucky.
Reverend Orison hopes to save Donnie Pfaster's soul by helping him break out of prison, but he is very wrong, as Donnie immediately plans to go after the victim who once escaped him - Scully.
7X08 - The Amazing Maleeni
When a small-time magician performs a trick where he appears to turn his head all the way around, but is then found dead in his van with his head neatly sawn off, Mulder and Scully suspect he was murdered and get caught up in an intricate scheme planned by two magicians trying to rob a bank.
Investigating a gruesome snakebite death leads Mulder and Scully to a reptilian religious group in the Deep South.
A young girl inexplicably disappears from her home and Mulder requests the case even though it is a full FBI matter, not just an X-File. When Mulder takes some outrageous leaps to convince the girl's parents that she will be found, Scully fears that Mulder is becoming too personally involved with the case because of his sister's abduction.
After arresting the murderer of Amber-Lynn LaPierre and discovering a mass gravesite containing the bodies of dozens of missing children, a man comes to Mulder and claims to have had visions of other victims who aren't buried at the site. Despite Scully's objections, he takes Mulder on a journey, which reveals what truly happened to his sister.
A Los Angeles police officer, who is being filmed for the show Cops, is attacked by a strange monster and Mulder and Scully are investigating the case. Scully is wary of having their faces put on national television, but Mulder welcomes the publicity.
7X13 - First Person Shooter
The lone gunmen call Mulder and Scully to a virtual reality development lab where they learn that one of the programme testers was killed inside the computer-generated game environment by the digital image of a woman. Needing to get his yah-yah's, Mulder enters the game to fight the woman, but Scully must step in to save him.
Mulder and Scully delve into the world of occult practises, including voodoo and hexcraft, while investigating a series of grisly murders.
The cigarette smoking man offers to show Scully the cure for all diseases if she travels with him, but on one condition: Mulder must not know about her trip.
As Mulder investigates a missing person case with a key feature being a menacing raven, he learns to enjoy the creature comforts of a well-tended home, while Scully must tough it out on an uncomfortable stakeout.
A series of coincidences leads Scully to a married man who she had an affair with during medical school, but who she left to protect his family.
When an employee of Morley Tobacco Co is apparently killed by tobacco beetles, Mulder suspects that the beetles have hatched inside his lungs and found their way there through inhalation of smoke from an experimental cigarette.
Mulder and Scully watch a movie with themselves as characters and are thoroughly disgusted at how they, and their case, are portrayed on the big screen. They recount how 18 months earlier they were followed around by a Hollywood producer while investigating a case concerning `The Lazarus Bowl', a mythical piece of pottery reputed to have inscribed on it the words that Jesus Christ spoke when he raised Lazarus from the dead.
Mulder and Scully cross paths with two women, who are identical and have followed each other across 17 states in the last three years, causing chaos and mayhem wherever they are.
Mulder and Scully discover a genie in a rug who, after 500 years of granting wishes, has come to the conclusion that people are still as greedy and self-centred as they have always been, and begins to corrupt the wishes she grants if they are not "specific" enough.
Mulder and Scully return to the town of their first X-Files investigation where a UFO has crashed in the forest. CSM arranges for Krycek to be released from prison in order for him to make contact with the aliens and begin rebuilding the `Project', while Scully's health appears to be taking a turn.