36
@article{x,
title = {x},
author = {x Ly, C.},
year = {x},
journal = {x},
volume = {x},
number = {x},
pages = {x--x},
doi = {x},
url={https://doi.org/x}
}
35
@article{Selb_24,
title = {Coding odor modality in piriform cortex efficiently with low-dimensional subspaces},
author = {Selb, D.M. and Barreiro, A. and Gautam, S.H. and Shew, W.L. and Ly, C.},
year = {2024},
journal = {x},
volume = {x},
number = {x},
pages = {x--x},
doi = {x},
url={https://doi.org/x}
}
34
@article{Sooter_24,
title = {Cortex deviates from criticality during action and deep sleep: a temporal renormalization group approach},
author = {Sooter, J.S. and Fontele, A.J. and Ly, C. and Barreiro, A. and Shew, W.L.},
year = {2024},
journal = {x},
volume = {x},
number = {x},
pages = {x--x},
doi = {x},
url={https://doi.org/x}
}
33
@article{Barreiro_24,
title = {Sensory input to cortex encoded on low-dimensional periphery-correlated subspaces.},
author = {Barreiro, A. and Fontele, A.J. and Ly, C. and Raju, P. and Gautam, S.H. and Shew, W.L.},
year = {2024},
journal = {PNAS Nexus},
volume = {3},
number = {1},
pages = {1--10},
doi = {10.1093/pnasnexus/pgae010},
url={https://doi.org/10.1093/pnasnexus/pgae010}
}
32
@article{Craft_23,
title = {Odor modality is transmitted to cortical brain regions from the olfactory bulb.},
author = {Craft, M.F. and Barreiro, A. and Gautam, S.H. and Shew, W.L. and Ly, C.},
year = {2023},
journal = {Journal of Neurophysiology},
volume = {130},
number = {5},
pages = {1226--1242},
doi = {10.1152/jn.00101.2023},
url={https://doi.org/10.1152/jn.00101.2023}
}
31
@article{BrownLy_23,
title = {Estimating the correlation between operational risk loss categories over different time horizons.},
author = {Brown, M.L. and Ly, C.},
year = {2023},
journal = {Journal of Operational Risk},
volume = {18},
number = {4},
pages = {1--31},
doi = {10.21314/JOP.2023.006},
url={https://www.dx.doi.org/10.21314/JOP.2023.006}
}
30
@article{CraftLy_22,
title = {The Effects of Background Noise on a Biophysical Model of Olfactory Bulb Mitral Cells.},
author = {Craft, M. and Ly, C.},
year = {2022},
journal = {Bulletin of Mathematical Biology},
volume = {84},
number = {107},
pages = {1--20},
doi = {10.1007/s11538-022-01066-8},
url={https://doi.org/10.1007/s11538-022-01066-8}
}
29
@article{LyWeinberg_22,
title = {Automaticity in ventricular myocyte cells pairs with ephaptic and gap junction coupling.},
author = {Ly, C. and Weinberg, S.H.},
year = {2022},
journal = {Chaos},
volume = {32},
number = {3},
pages = {033123},
doi = {10.1063/5.0085291},
url={https://doi.org/10.1063/5.0085291}
}
28
@article{Craft_21,
title = {Differences in olfactory bulb mitral cell spiking with ortho- and retronasal stimulation revealed by data-driven models},
author = {Craft, M.F. and Barreiro, A. and Gautam, S.H. and Shew, W.L. and Ly, C.},
year = {2021},
journal = {PLoS Computational Biology},
volume = {17},
number = {9},
pages = {e1009169},
doi = {10.1371/journal.pcbi.1009169},
url={https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1009169}
}
27
@article{Ly_21,
title = {Odor-evoked increases in olfactory bulb mitral cell spiking variability},
author = {Cheng Ly and Andrea K. Barreiro and Shree Hari Gautam and Woodrow L. Shew},
journal = {iScience},
volume = {24},
number = {9},
pages = {102946},
year = {2021},
issn = {2589-0042},
doi = {10.1016/j.isci.2021.102946},
url = {https://www.sciencedirect.com/science/article/pii/S2589004221009147}
}
26
@article{Enkhtaivan_21,
title = {A Competition of Critics in Human Decision-Making},
author = {Enkhtaivan, E. and Nishimura, J. and Ly, C. and Cochran, A.L.},
year = {2021},
journal = {computational psychiatry},
volume = {5},
pages = {81--101},
doi = {10.5334/cpsy.64}
}
25
@article{WL_21,
title = {Statistical Analysis of Decoding Performances of Diverse Populations of Neurons},
author = {Wendling, K. and Ly, C.},
year = {2021},
journal = {Neural Computation},
volume = {33},
pages = {764--801},
doi = {10.1162/neco_a_01355}
}
24
@article{LSB_19,
title = {Efficient calculation of heterogeneous non-equilibrium statistics in coupled firing rate models},
author = {Ly, C. and Shew, W. and Barreiro, A.},
year = {2019},
journal = {Journal of Mathematical Neuroscience},
volume = {9},
pages = {2},
doi = {10.1186/s13408-019-0070-7}
}
23
@article{reynoldsMinic_19,
title = {Development of a decerebrate model for investigating mechanisms mediating viscero-sympathetic reflexes in the spinalized rat},
author = {Reynolds, Christian. and O'Leary, Donal S and Ly, Cheng and Smith, Scott A and Minic, Zeljka},
year = {2019},
journal = {American Journal of Physiology-Heart and Circulatory Physiology},
volume = {316},
pages = {H1332--H1340},
publisher={American Physiological Society Bethesda, MD}
doi = {10.1152/ajpheart.00724.2018}
}
22
@article{WendlingLy_19,
title = {Firing Rate Distributions in a Feedforward Network of Neural Oscillators with Intrinsic and Network Heterogeneity},
author = {Wendling, K. and Ly, C.},
year = {2019},
journal = {Mathematical Biosciences and Engineering},
volume = {16},
pages = {2023--2048},
doi = {10.3934/mbe.2019099}
}
21
@article{LyWeinberg_18,
title = {Analysis of Heterogeneous Cardiac Pacemaker Tissue Models and Traveling Wave Dynamics},
author = {Ly, C. and Weinberg, S.H.},
year = {2018},
journal = {Journal of Theoretical Biology},
volume = {459},
pages = {18--35},
doi = {10.1016/j.jtbi.2018.09.023}
}
20
@article{BarreiroLy_jmns_18,
title = {Investigating the correlation-firing rate relationship in heterogeneous recurrent networks},
author = {Barreiro, A. and Ly, C.},
year = {2018},
journal = {Journal of Mathematical Neuroscience},
volume = {8},
pages = {8},
doi = {10.1186/s13408-018-0063-y}
}
19
@article{BarreiroLy_pre_17,
title = {Practical approximation method for firing-rate models of coupled neural networks with correlated inputs},
author = {Barreiro, A. and Ly, C.},
publisher = {American Physical Society},
year = {2017},
journal = {Physical Review E},
volume = {96},
pages = {022413},
doi = {10.1103/PhysRevE.96.022413}
}
18
@article{BGSL_17,
title = {A theoretical framework for analyzing coupled neuronal networks: Application to the olfactory system},
author = {Barreiro, A. and Gautam, S.H. and Shew, W. and Ly, C.},
publisher = {PLoS},
year = {2017},
journal = {PLoS Computational Biology},
volume = {13},
pages = {e1005780},
doi = {10.1371/journal.pcbi.1005780}
}
17
@article{LyDoiron_17,
title = {Noise-Enhanced Coding in Phasic Neuron Spike Trains},
author = {Ly, C. and Doiron, B.},
publisher = {PLoS},
year = {2017},
journal = {PLoS ONE},
volume = {4},
pages = {e0176963},
doi = {10.1371/journal.pone.0176963}
}
16
@article{BarreiroLy_RecrCorr_17,
title = {When do correlations increase with firing rates in recurrent networks?},
author = {Barreiro, A.K. and Ly, C.},
publisher = {PLoS},
year = {2017},
journal = {PLoS Computational Biology},
volume = {13},
pages = {e1005506},
doi = {10.1371/journal.pcbi.1005506}
}
15
@article{LyMarsat_18,
title = {Variable Synaptic Strengths Controls the Firing Rate Distribution in Feedforward Neural Networks},
author = {Ly, C. and Marsat, G.},
year = {2018},
journal = {Journal of Computational Neuroscience},
volume = {44},
pages = {75--95},
doi = {10.1007/s10827-017-0670-8}
}
14
@article{Ly_15,
title = {Firing Rate Dynamics in Recurrent Spiking Neural Networks with Intrinsic and Network Heterogeneity},
author = {Ly, Cheng},
publisher = {Springer},
year = {2015},
journal = {Journal of Computational Neuroscience},
volume = {39},
pages = {311--327},
doi = {10.1007/s10827-015-0578-0}
}
13
@article{NLC_15,
title = {One-Dimensional Population Density Approaches to Recurrently Coupled Networks of Neurons with Noise},
author = {Nicola, Wilten and Ly, Cheng and Campbell, Sue Ann},
publisher = {SIAM},
year = {2015},
journal = {SIAM Journal on Applied Applied Mathematics},
volume = {75},
pages = {2333--2360},
doi = {10.1137/140995738}
}
12
@article{Ly_heterOsc_14,
title = {Dynamics of Coupled Noisy Neural Oscillators with Heterogeneous Phase Resetting Curves},
author = {Ly, Cheng},
publisher = {SIAM},
year = {2014},
journal = {SIAM Journal on Applied Dynamical Systems},
volume = {13},
pages = {1733--1755},
doi = {10.1137/140971099}
}
11
@article{Ly_PrincDimRed_13,
title = {{A} {P}rincipled {D}imension-{R}eduction {M}ethod for the {P}opulation {D}ensity {A}pproach to {M}odeling {N}etworks of {N}eurons with {S}ynaptic {D}ynamics},
author = {Ly, Cheng},
journal = {Neural Computation},
volume = {25},
pages = {2682--2708},
year = {2013},
doi = {10.1162/NECO_a_00489}
}
10
@article{LMD_whisker_12,
title = {Cellular and circuit mechanisms maintain low spike co-variability and enhance population coding in somatosensory cortex},
author = {Ly, C. and Middleton, J.W. and Doiron, B.},
journal = {Frontiers in Computational Neuroscience},
volume = {6},
pages = {1--26},
year = {2012},
doi = {10.3389/fncom.2012.00007}
}
9
@article{lyErm_physd_11,
title = {Analytic Approximations of Statistical Quantities and Response of Noisy Oscillators},
author = {Ly, Cheng and Ermentrout, G. Bard},
journal = {Physica D},
volume = {240},
pages = {719--731},
year = {2011},
doi = {10.1016/j.physd.2010.12.004},
publisher = {Elsevier}
}
8
@article{lmbe_11,
title = {Phase-resetting curve determines how BK currents affect neuronal firing},
author = {Ly, Cheng and Melman, Tamar and Barth, Alison and Ermentrout, G. Bard},
journal = {Journal of Computational Neuroscience},
volume = {30},
pages = {211--223},
year = {2011},
doi = {10.1007/s10827-010-0246-3},
publisher = {Springer}
}
7
@article{lyErm_pre_10,
title = {Coupling regularizes individual units in noisy populations},
author = {Ly, Cheng and Ermentrout, G. Bard},
journal = {Physical Review E},
volume = {81},
pages = {011911},
year = {2010},
doi = {10.1103/PhysRevE.81.011911},
publisher = {American Physical Society}
}
6
@article{lyErm_siads_10,
author = {Cheng Ly and G. Bard Ermentrout},
title = {Analysis of Recurrent Networks of Pulse-Coupled Noisy Neural Oscillators},
publisher = {SIAM},
year = {2010},
journal = {SIAM Journal on Applied Dynamical Systems},
volume = {9},
pages = {113--137},
doi = {10.1137/090756065}
}
5
@article{ly_doiron_09,
Author = {C. Ly and B. Doiron},
Journal = {PLoS Computational Biology},
Pages = {e1000365},
Title = {Divisive Gain Modulation with Dynamic Stimuli in Integrate-and-Fire Neurons},
Volume = {5},
Month={4},
Number={4},
doi = {10.1371/journal.pcbi.1000365},
Year = {2009}
}
4
@article{ly_ermentrout_09,
Author = {C. Ly and G. Bard Ermentrout},
Journal = {Journal of Computational Neuroscience},
Pages = {425--443},
Title = {Synchronization {D}ynamics of {T}wo {C}oupled {N}eural {O}scillators {R}eceiving {S}hared and {U}nshared {N}oisy {S}timuli},
Volume = {26},
DOI={10.1007/s10827-008-0120-8},
Year = {2009}
}
3
@article{ly_tranchina_09,
Author = {C. Ly and D. Tranchina},
Journal = {Neural Computation},
Pages = {360--396},
Title = {Spike {T}rain {S}tatistics and {D}ynamics with {S}ynaptic {I}nput from any {R}enewal {P}rocess: {A} {P}opulation {D}ensity {A}pproach},
Volume = {21},
Year = {2009},
doi={10.1162/neco.2008.03-08-743}
}
2
@article{ly_tranchina_07,
Author = {C. Ly and D. Tranchina},
Journal = {Neural Computation},
Pages = {2032--2092},
Title = {Critical {A}nalysis of {D}imension {R}eduction by a {M}oment {C}losure {M}ethod in a {P}opulation {D}ensity {A}pproach to {N}eural {N}etwork {M}odeling},
Volume = {19},
Year = {2007},
doi={10.1162/neco.2007.19.8.2032}
}
1
@article{ALT_06,
title={Population density methods for stochastic neurons with realistic synaptic kinetics: Firing rate dynamics and fast computational methods},
author={Apfaltrer, F. and Ly, C. and Tranchina, D.},
journal={Network: Computation in Neural Systems},
volume={17},
pages={373--418},
year={2006},
doi={10.1080/09548980601069787}
}