Data are distributed HDF5 files containing 10 ms binned firing rates, brain area IDs for each unit, and behavioral data (41.5GB total). Data are available through Google Drive. Email wallen@stanford.edu to obtain access.

Each HDF5 file includes histological information, firing rate information, and behavioral information, as well as some basic information about each unit.

• Histological:
  • areas (Nunit): area encodings using final collapsed hierarchy (area names listed in area_map.csv)
  • areas_aibs (Nunit): area encoding from Allen Brain Institute (AIBS) atlas.
  • areas_aibs_higher (Nunit): area encoding from Allen Brain Institute (AIBS) atlas at high-level cut of hierarchy.
  • depth (Nunit): depth of each unit along probe
  • locs (Nunit x 3): registered 3D location of each unit within the AIBS reference space.
• Behavioral:
  • session (Ntrial): which session each trial come from (session 0 = endogenous thirst, session 1 = optogenetic stimulation, session 2 = washout)
  • behavior (5 x 600 x Ntrial): matrix of binary-encoded behavioral data, binned at 10 ms time resolution.
    • Row 1: Go odor timing
    • Row 2: No-Go odor timing
    • Row 3: Reward time
    • Row 4: Lick times
    • Row 5: Stim times
• Activity:
  • rates (Nunit x 600 x Ntrial): firing rates for each unit binned at 10 ms time resolution (6 s per trial), by number of trials.
• Diagnostic:
  • fp_rate (Nunit): estimated false positive rate (note: may be inaccurate)
  • avg_fr (Nunit): average firing rate of each neuron across session.

Coming soon...