Course Overview:
This course is designed to provide an in-depth understanding of advanced computer vision techniques and their applications in the Healthcare & Life Sciences industries. Participants will learn cutting-edge methods for object detection, semantic segmentation, and 3D reconstruction, enabling them to develop and deploy sophisticated computer vision solutions for various tasks relevant to the healthcare and life sciences domains, such as medical image analysis, digital pathology, and drug discovery.
Learning Objectives:
Understand the principles and techniques behind advanced computer vision methods
Implement and train state-of-the-art object detection models, such as Faster R-CNN, YOLO, and SSD, for medical object detection
Apply semantic segmentation algorithms, such as U-Net, DeepLab, and Mask R-CNN, for pixel-wise classification in medical images
Reconstruct 3D models from 2D medical images using structure from motion (SfM) and multi-view stereo (MVS) techniques
Develop and deploy advanced computer vision solutions for healthcare and life sciences applications, such as disease diagnosis and drug discovery
Course Highlights:
1. Object Detection in Medical Images
Overview of object detection and its applications in the Healthcare & Life Sciences industries
Two-stage object detectors: R-CNN, Fast R-CNN, and Faster R-CNN
Single-stage object detectors: YOLO, SSD, and RetinaNet
Hands-on exercises: Implementing and training object detection models on medical image datasets
2. Semantic Segmentation for Medical Image Analysis
Introduction to semantic segmentation and its importance in healthcare and life sciences
Fully Convolutional Networks (FCNs) for semantic segmentation
Encoder-decoder architectures: U-Net, SegNet, and DeepLab
Instance segmentation with Mask R-CNN for cell and nuclei detection
Hands-on exercises: Applying semantic segmentation models to medical and biological images
3. 3D Reconstruction and Visualization
Principles of 3D reconstruction from 2D medical images
Structure from Motion (SfM) and feature matching techniques
Multi-View Stereo (MVS) and dense reconstruction methods
Point cloud processing and mesh generation for medical visualization
Hands-on exercises: Reconstructing 3D models of anatomical structures and biological samples
4. Advanced Topics and Applications
Attention mechanisms and transformer-based models for medical image analysis
Domain adaptation and transfer learning for cross-modality image analysis
Unsupervised and self-supervised learning for representation learning in healthcare data
Case studies of advanced computer vision in healthcare and life sciences (e.g., digital pathology, drug discovery)
Hands-on exercises: Developing an advanced computer vision solution for a specific healthcare or life sciences use case
5. Deployment and Optimization
Deploying computer vision models in production environments
Optimizing models for real-time inference and edge deployment
Monitoring and updating deployed models for continuous improvement
Best practices for data management and version control in computer vision projects
Hands-on exercises: Deploying an optimized computer vision model using a cloud platform (e.g., AWS, GCP)
Prerequisites:
Strong understanding of linear algebra, calculus, and probability theory
Proficiency in programming with Python and deep learning frameworks (e.g., TensorFlow, PyTorch)
Familiarity with basic computer vision concepts and techniques (e.g., image processing, feature extraction)
Knowledge of convolutional neural networks (CNNs) and their applications