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known bugs

All of these will hopefully be fixed eventually...
  • colext fails when there are missing yearlySiteCovs
  • formatMult converts numeric vectors to character vectors if factors are present in df.in
  • predict fails when newdata contains factors that do not have exactly the same levels as the original covariate used in the analysis. There is a simple workaround described in this thread.
  • predict does not properly handle scale in model formula.